RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 COX11Q9Y6N1 276 aa18.27■□□□□ 0.51
POLR2J3-220ENST00000613744 IGKV3D-15A0A087WSY6 115 aa18.26■□□□□ 0.51
POLR2J3-220ENST00000613744 GNLYP22749 145 aa18.26■□□□□ 0.51
POLR2J3-220ENST00000613744 FOXF2Q12947 444 aa18.26■□□□□ 0.51
POLR2J3-220ENST00000613744 Q6ZN92 141 aa18.26■□□□□ 0.51
POLR2J3-220ENST00000613744 ZDHHC23Q8IYP9 409 aa18.26■□□□□ 0.51
POLR2J3-220ENST00000613744 PRR7Q8TB68 274 aa18.26■□□□□ 0.51
POLR2J3-220ENST00000613744 ALKBH3Q96Q83 286 aaPredicted RBP18.26■□□□□ 0.51
POLR2J3-220ENST00000613744 QTRT1Q9BXR0 403 aaKnown RBP18.26■□□□□ 0.51
POLR2J3-220ENST00000613744 C12orf49Q9H741 205 aa18.26■□□□□ 0.51
POLR2J3-220ENST00000613744 ATP5G3P48201 142 aa18.26■□□□□ 0.51
POLR2J3-220ENST00000613744 LGALS4P56470 323 aa18.26■□□□□ 0.51
POLR2J3-220ENST00000613744 UBE2G2P60604 165 aa18.26■□□□□ 0.51
POLR2J3-220ENST00000613744 RPS20P60866 119 aaKnown RBP18.26■□□□□ 0.51
POLR2J3-220ENST00000613744 FGFRL1Q8N441 504 aa18.26■□□□□ 0.51
POLR2J3-220ENST00000613744 ZNF114Q8NC26 417 aa18.26■□□□□ 0.51
POLR2J3-220ENST00000613744 OR1L6Q8NGR2 347 aa18.26■□□□□ 0.51
POLR2J3-220ENST00000613744 DOCK7Q96N67 2140 aa18.25■□□□□ 0.51
POLR2J3-220ENST00000613744 PPBPP02775 128 aa18.25■□□□□ 0.51
POLR2J3-220ENST00000613744 BMP5P22003 454 aa18.25■□□□□ 0.51
POLR2J3-220ENST00000613744 RPP30P78346 268 aaKnown RBP18.25■□□□□ 0.51
POLR2J3-220ENST00000613744 CEACAM21Q3KPI0 293 aa18.25■□□□□ 0.51
POLR2J3-220ENST00000613744 WDR73Q6P4I2 378 aa18.25■□□□□ 0.51
POLR2J3-220ENST00000613744 COLCA1Q6ZS62 124 aa18.25■□□□□ 0.51
POLR2J3-220ENST00000613744 CNEP1R1Q8N9A8 125 aa18.25■□□□□ 0.51
POLR2J3-220ENST00000613744 BET1LQ9NYM9 111 aa18.25■□□□□ 0.51
POLR2J3-220ENST00000613744 A8MXE2 369 aa18.24■□□□□ 0.51
POLR2J3-220ENST00000613744 KRTDAPP60985 99 aa18.24■□□□□ 0.51
POLR2J3-220ENST00000613744 TFF3Q07654 80 aa18.24■□□□□ 0.51
POLR2J3-220ENST00000613744 HLA-DRB5Q30154 266 aa18.24■□□□□ 0.51
POLR2J3-220ENST00000613744 OR5A2Q8NGI9 324 aa18.24■□□□□ 0.51
POLR2J3-220ENST00000613744 MTCH1Q9NZJ7 389 aa18.24■□□□□ 0.51
POLR2J3-220ENST00000613744 ARHGAP21Q5T5U3 1957 aa18.24■□□□□ 0.51
POLR2J3-220ENST00000613744 POLEQ07864 2286 aa18.24■□□□□ 0.51
POLR2J3-220ENST00000613744 FCN1O00602 326 aa18.24■□□□□ 0.51
POLR2J3-220ENST00000613744 CRYAAP02489 173 aa18.24■□□□□ 0.51
POLR2J3-220ENST00000613744 P0C879 139 aa18.24■□□□□ 0.51
POLR2J3-220ENST00000613744 C20orf204Q6ZNR8 217 aa18.24■□□□□ 0.51
POLR2J3-220ENST00000613744 PNKDQ8N490 385 aa18.24■□□□□ 0.51
POLR2J3-220ENST00000613744 ZBTB34Q8NCN2 500 aa18.24■□□□□ 0.51
POLR2J3-220ENST00000613744 CPEB3Q8NE35 698 aaKnown RBP18.24■□□□□ 0.51
POLR2J3-220ENST00000613744 ALKBH7Q9BT30 221 aaPredicted RBP18.24■□□□□ 0.51
POLR2J3-220ENST00000613744 SFXN3Q9BWM7 321 aa18.24■□□□□ 0.51
POLR2J3-220ENST00000613744 SLC35D1Q9NTN3 355 aa18.24■□□□□ 0.51
POLR2J3-220ENST00000613744 PPP1R3CQ9UQK1 317 aa18.24■□□□□ 0.51
POLR2J3-220ENST00000613744 MBD3L4A6NDZ8 208 aaPredicted RBP18.23■□□□□ 0.51
POLR2J3-220ENST00000613744 MBD3L3A6NE82 208 aaPredicted RBP18.23■□□□□ 0.51
POLR2J3-220ENST00000613744 MBD3L5A6NJ08 208 aaPredicted RBP18.23■□□□□ 0.51
POLR2J3-220ENST00000613744 C19orf35Q6ZS72 473 aa18.23■□□□□ 0.51
POLR2J3-220ENST00000613744 MYPOPQ86VE0 399 aaPredicted RBP18.23■□□□□ 0.51
POLR2J3-220ENST00000613744 BATF2Q8N1L9 274 aa18.23■□□□□ 0.51
POLR2J3-220ENST00000613744 MBD3L2Q8NHZ7 208 aaPredicted RBP18.23■□□□□ 0.51
POLR2J3-220ENST00000613744 APOBEC3DQ96AK3 386 aaPredicted RBP18.23■□□□□ 0.51
POLR2J3-220ENST00000613744 TMEM45BQ96B21 275 aa18.23■□□□□ 0.51
POLR2J3-220ENST00000613744 KCNS1Q96KK3 526 aa18.23■□□□□ 0.51
POLR2J3-220ENST00000613744 FOXB1Q99853 325 aa18.23■□□□□ 0.51
POLR2J3-220ENST00000613744 DERL1Q9BUN8 251 aa18.23■□□□□ 0.51
POLR2J3-220ENST00000613744 NRN1Q9NPD7 142 aa18.23■□□□□ 0.51
POLR2J3-220ENST00000613744 CTNNBIP1Q9NSA3 81 aaPredicted RBP18.23■□□□□ 0.51
POLR2J3-220ENST00000613744 TBL2Q9Y4P3 447 aaKnown RBP18.23■□□□□ 0.51
POLR2J3-220ENST00000613744 CCL21O00585 134 aa18.22■□□□□ 0.51
POLR2J3-220ENST00000613744 CA7P43166 264 aa18.22■□□□□ 0.51
POLR2J3-220ENST00000613744 PRRX1P54821 245 aa18.22■□□□□ 0.51
POLR2J3-220ENST00000613744 AARDQ4LEZ3 155 aa18.22■□□□□ 0.51
POLR2J3-220ENST00000613744 APH1AQ96BI3 265 aa18.22■□□□□ 0.51
POLR2J3-220ENST00000613744 ESPL1Q14674 2120 aa18.22■□□□□ 0.51
POLR2J3-220ENST00000613744 LRRC30A6NM36 301 aa18.22■□□□□ 0.51
POLR2J3-220ENST00000613744 C9JCJ5 164 aa18.22■□□□□ 0.51
POLR2J3-220ENST00000613744 VWA1Q6PCB0 445 aa18.22■□□□□ 0.51
POLR2J3-220ENST00000613744 OR1L1Q8NH94 360 aa18.22■□□□□ 0.51
POLR2J3-220ENST00000613744 HS3ST6Q96QI5 342 aa18.22■□□□□ 0.51
POLR2J3-220ENST00000613744 FAM208BQ5VWN6 2430 aa18.22■□□□□ 0.51
POLR2J3-220ENST00000613744 TRBV20OR9-2A0A075B6H5 130 aa18.21■□□□□ 0.51
POLR2J3-220ENST00000613744 IGHV2-70DA0A0C4DH43 119 aa18.21■□□□□ 0.51
POLR2J3-220ENST00000613744 A0A1W2PPV4 95 aa18.21■□□□□ 0.51
POLR2J3-220ENST00000613744 HSPB6O14558 160 aa18.21■□□□□ 0.51
POLR2J3-220ENST00000613744 MPDU1O75352 247 aa18.21■□□□□ 0.51
POLR2J3-220ENST00000613744 B4GALT1P15291 398 aa18.21■□□□□ 0.51
POLR2J3-220ENST00000613744 EGR1P18146 543 aa18.21■□□□□ 0.51
POLR2J3-220ENST00000613744 RPEL1Q2QD12 228 aa18.21■□□□□ 0.51
POLR2J3-220ENST00000613744 OR56B2PQ8NGI1 322 aa18.21■□□□□ 0.51
POLR2J3-220ENST00000613744 OCC1Q8TAD7 63 aa18.21■□□□□ 0.51
POLR2J3-220ENST00000613744 OR1A1Q9P1Q5 309 aa18.21■□□□□ 0.51
POLR2J3-220ENST00000613744 WDR83OSQ9Y284 106 aa18.21■□□□□ 0.51
POLR2J3-220ENST00000613744 IGHV2OR16-5A0A0B4J2B6 119 aa18.21■□□□□ 0.51
POLR2J3-220ENST00000613744 ZNF16P17020 682 aaPredicted RBP18.21■□□□□ 0.51
POLR2J3-220ENST00000613744 CD1BP29016 333 aa18.21■□□□□ 0.51
POLR2J3-220ENST00000613744 KIR2DL2P43627 348 aaPredicted RBP18.21■□□□□ 0.51
POLR2J3-220ENST00000613744 PMCHL1Q16048 86 aa18.21■□□□□ 0.51
POLR2J3-220ENST00000613744 NRN1LQ496H8 165 aa18.21■□□□□ 0.51
POLR2J3-220ENST00000613744 C9orf135Q5VTT2 229 aa18.21■□□□□ 0.51
POLR2J3-220ENST00000613744 FGF23Q9GZV9 251 aaPredicted RBP18.21■□□□□ 0.51
POLR2J3-220ENST00000613744 GNB4Q9HAV0 340 aa18.21■□□□□ 0.51
POLR2J3-220ENST00000613744 RTTNQ86VV8 2226 aa18.2■□□□□ 0.5
POLR2J3-220ENST00000613744 FREM1Q5H8C1 2179 aa18.2■□□□□ 0.5
POLR2J3-220ENST00000613744 ZNF462Q96JM2 2506 aa18.2■□□□□ 0.5
POLR2J3-220ENST00000613744 SNURFLB1AK76 121 aa18.2■□□□□ 0.5
POLR2J3-220ENST00000613744 GPM6AP51674 278 aa18.2■□□□□ 0.5
POLR2J3-220ENST00000613744 FAM214BQ7L5A3 538 aa18.2■□□□□ 0.5
POLR2J3-220ENST00000613744 KCNS2Q9ULS6 477 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms