RNA–Protein interactions for RNA: ENST00000613228.1

PDE6A-204, Transcript of phosphodiesterase 6A, humanhuman

TSL 5 BASIC

Gene PDE6A, Length 5,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-204ENST00000613228 MAS1LP35410 378 aa7.37□□□□□ -1.23
PDE6A-204ENST00000613228 UNQ5815/PRO19632Q6UWF5 114 aa7.37□□□□□ -1.23
PDE6A-204ENST00000613228 NEU4Q8WWR8 484 aaPredicted RBP7.37□□□□□ -1.23
PDE6A-204ENST00000613228 NDFIP1Q9BT67 221 aa7.37□□□□□ -1.23
PDE6A-204ENST00000613228 TUBD1Q9UJT1 453 aa7.37□□□□□ -1.23
PDE6A-204ENST00000613228 TBL2Q9Y4P3 447 aaKnown RBP7.37□□□□□ -1.23
PDE6A-204ENST00000613228 DENND4CQ5VZ89 1909 aa7.37□□□□□ -1.23
PDE6A-204ENST00000613228 F5P12259 2224 aa7.37□□□□□ -1.23
PDE6A-204ENST00000613228 GAGE12BA1L429 117 aa7.37□□□□□ -1.23
PDE6A-204ENST00000613228 CORTO00230 105 aa7.37□□□□□ -1.23
PDE6A-204ENST00000613228 RBFOX2O43251 390 aaKnown RBP eCLIP7.37□□□□□ -1.23
PDE6A-204ENST00000613228 AMY1AP04745 511 aa7.37□□□□□ -1.23
PDE6A-204ENST00000613228 OTX1P32242 354 aaPredicted RBP7.37□□□□□ -1.23
PDE6A-204ENST00000613228 WNT5AP41221 380 aa7.37□□□□□ -1.23
PDE6A-204ENST00000613228 SEC11AP67812 179 aa7.37□□□□□ -1.23
PDE6A-204ENST00000613228 TMEM249Q2WGJ8 235 aa7.37□□□□□ -1.23
PDE6A-204ENST00000613228 STXBP6Q8NFX7 210 aa7.37□□□□□ -1.23
PDE6A-204ENST00000613228 PRR13Q9NZ81 148 aa7.37□□□□□ -1.23
PDE6A-204ENST00000613228 MRPS16Q9Y3D3 137 aaKnown RBP7.37□□□□□ -1.23
PDE6A-204ENST00000613228 MYO10Q9HD67 2058 aa7.37□□□□□ -1.23
PDE6A-204ENST00000613228 C1QL1O75973 258 aa7.37□□□□□ -1.23
PDE6A-204ENST00000613228 RAB37Q96AX2 223 aa7.37□□□□□ -1.23
PDE6A-204ENST00000613228 GEMIN7Q9H840 131 aaKnown RBP7.37□□□□□ -1.23
PDE6A-204ENST00000613228 SDF2L1Q9HCN8 221 aa7.37□□□□□ -1.23
PDE6A-204ENST00000613228 TIMM9Q9Y5J7 89 aa7.37□□□□□ -1.23
PDE6A-204ENST00000613228 TRAV9-2A0A087WT02 112 aa7.37□□□□□ -1.23
PDE6A-204ENST00000613228 E9PLN8 166 aa7.37□□□□□ -1.23
PDE6A-204ENST00000613228 SPINK4O60575 86 aa7.37□□□□□ -1.23
PDE6A-204ENST00000613228 LINC00869P0C866 280 aa7.37□□□□□ -1.23
PDE6A-204ENST00000613228 PLAURQ03405 335 aa7.37□□□□□ -1.23
PDE6A-204ENST00000613228 PIP4P1Q86T03 277 aa7.37□□□□□ -1.23
PDE6A-204ENST00000613228 OR4A5Q8NH83 315 aa7.37□□□□□ -1.23
PDE6A-204ENST00000613228 VKORC1Q9BQB6 163 aa7.37□□□□□ -1.23
PDE6A-204ENST00000613228 TPPP3Q9BW30 176 aa7.37□□□□□ -1.23
PDE6A-204ENST00000613228 HLA-DRB1P01911 266 aa7.36□□□□□ -1.23
PDE6A-204ENST00000613228 OPRK1P41145 380 aa7.36□□□□□ -1.23
PDE6A-204ENST00000613228 EMP1P54849 157 aa7.36□□□□□ -1.23
PDE6A-204ENST00000613228 FAM71F2Q6NXP2 309 aa7.36□□□□□ -1.23
PDE6A-204ENST00000613228 GTSF1LQ9H1H1 148 aa7.36□□□□□ -1.23
PDE6A-204ENST00000613228 GOLGA4Q13439 2230 aaKnown RBP7.36□□□□□ -1.23
PDE6A-204ENST00000613228 TRBV6-6A0A0A6YYG2 114 aa7.36□□□□□ -1.23
PDE6A-204ENST00000613228 GRIFINA4D1Z8 144 aa7.36□□□□□ -1.23
PDE6A-204ENST00000613228 MBD3L4A6NDZ8 208 aaPredicted RBP7.36□□□□□ -1.23
PDE6A-204ENST00000613228 MBD3L3A6NE82 208 aaPredicted RBP7.36□□□□□ -1.23
PDE6A-204ENST00000613228 MBD3L5A6NJ08 208 aaPredicted RBP7.36□□□□□ -1.23
PDE6A-204ENST00000613228 M0QZ24 198 aa7.36□□□□□ -1.23
PDE6A-204ENST00000613228 TEX38Q6PEX7 206 aa7.36□□□□□ -1.23
PDE6A-204ENST00000613228 IGFL3Q6UXB1 125 aa7.36□□□□□ -1.23
PDE6A-204ENST00000613228 MBD3L2Q8NHZ7 208 aaPredicted RBP7.36□□□□□ -1.23
PDE6A-204ENST00000613228 PRR7Q8TB68 274 aa7.36□□□□□ -1.23
PDE6A-204ENST00000613228 TMEM171Q8WVE6 324 aa7.36□□□□□ -1.23
PDE6A-204ENST00000613228 ABHD17AQ96GS6 310 aa7.36□□□□□ -1.23
PDE6A-204ENST00000613228 IMMP2LQ96T52 175 aa7.36□□□□□ -1.23
PDE6A-204ENST00000613228 POLR3KQ9Y2Y1 108 aaPredicted RBP7.36□□□□□ -1.23
PDE6A-204ENST00000613228 PDE4DIPQ5VU43 2346 aa7.36□□□□□ -1.23
PDE6A-204ENST00000613228 HELTA6NFD8 242 aa7.36□□□□□ -1.23
PDE6A-204ENST00000613228 FAM90A9PA6NNJ1 464 aa7.36□□□□□ -1.23
PDE6A-204ENST00000613228 H3BP45 60 aa7.36□□□□□ -1.23
PDE6A-204ENST00000613228 CT45A10P0DMU9 189 aa7.36□□□□□ -1.23
PDE6A-204ENST00000613228 GPR6P46095 362 aaPredicted RBP7.36□□□□□ -1.23
PDE6A-204ENST00000613228 HIST1H1AQ02539 215 aaPredicted RBP7.36□□□□□ -1.23
PDE6A-204ENST00000613228 CYP2G1PQ6ZSU1 146 aa7.36□□□□□ -1.23
PDE6A-204ENST00000613228 ERASQ7Z444 233 aa7.36□□□□□ -1.23
PDE6A-204ENST00000613228 RNASE6Q93091 150 aaKnown RBP7.36□□□□□ -1.23
PDE6A-204ENST00000613228 PLPPR2Q96GM1 343 aa7.36□□□□□ -1.23
PDE6A-204ENST00000613228 CCL13Q99616 98 aa7.36□□□□□ -1.23
PDE6A-204ENST00000613228 GNB4Q9HAV0 340 aa7.36□□□□□ -1.23
PDE6A-204ENST00000613228 IGKV1-9A0A0C4DH69 117 aa7.36□□□□□ -1.23
PDE6A-204ENST00000613228 K7EP13 123 aa7.36□□□□□ -1.23
PDE6A-204ENST00000613228 ASCL4Q6XD76 172 aa7.36□□□□□ -1.23
PDE6A-204ENST00000613228 Q6ZS49 121 aa7.36□□□□□ -1.23
PDE6A-204ENST00000613228 NUP37Q8NFH4 326 aa7.36□□□□□ -1.23
PDE6A-204ENST00000613228 OR4F17Q8NGA8 305 aa7.36□□□□□ -1.23
PDE6A-204ENST00000613228 OR52E5Q8NH55 327 aa7.36□□□□□ -1.23
PDE6A-204ENST00000613228 PAGE4O60829 102 aa7.35□□□□□ -1.23
PDE6A-204ENST00000613228 PPBPP02775 128 aa7.35□□□□□ -1.23
PDE6A-204ENST00000613228 Q1RN00 199 aa7.35□□□□□ -1.23
PDE6A-204ENST00000613228 C1QL2Q7Z5L3 287 aa7.35□□□□□ -1.23
PDE6A-204ENST00000613228 RCC1LQ96I51 464 aaKnown RBP7.35□□□□□ -1.23
PDE6A-204ENST00000613228 HARBI1Q96MB7 349 aa7.35□□□□□ -1.23
PDE6A-204ENST00000613228 ZNF257Q9Y2Q1 563 aa7.35□□□□□ -1.23
PDE6A-204ENST00000613228 TMEM56-RWDD3S4R434 201 aa7.35□□□□□ -1.23
PDE6A-204ENST00000613228 TMEM250H0YL14 139 aa7.35□□□□□ -1.23
PDE6A-204ENST00000613228 RAMP3O60896 148 aa7.35□□□□□ -1.23
PDE6A-204ENST00000613228 CXorf1O96002 111 aa7.35□□□□□ -1.23
PDE6A-204ENST00000613228 LY6G6FQ5SQ64 297 aa7.35□□□□□ -1.23
PDE6A-204ENST00000613228 PRSS3P2Q8NHM4 247 aa7.35□□□□□ -1.23
PDE6A-204ENST00000613228 UBALD1Q8TB05 177 aa7.35□□□□□ -1.23
PDE6A-204ENST00000613228 TMEM230Q96A57 120 aa7.35□□□□□ -1.23
PDE6A-204ENST00000613228 ZNF837Q96EG3 531 aaPredicted RBP7.35□□□□□ -1.23
PDE6A-204ENST00000613228 ZFAND6Q6FIF0 208 aa7.35□□□□□ -1.23
PDE6A-204ENST00000613228 OR1L1Q8NH94 360 aa7.35□□□□□ -1.23
PDE6A-204ENST00000613228 RTBDNQ9BSG5 229 aaPredicted RBP7.35□□□□□ -1.23
PDE6A-204ENST00000613228 TMEM70Q9BUB7 260 aa7.35□□□□□ -1.23
PDE6A-204ENST00000613228 INSIG2Q9Y5U4 225 aa7.35□□□□□ -1.23
PDE6A-204ENST00000613228 TRBV6-7A0A0A0MS04 114 aa7.35□□□□□ -1.23
PDE6A-204ENST00000613228 C7orf71A4D174 169 aa7.35□□□□□ -1.23
PDE6A-204ENST00000613228 H3BUT2 72 aa7.35□□□□□ -1.23
PDE6A-204ENST00000613228 H3BVH4 76 aa7.35□□□□□ -1.23
PDE6A-204ENST00000613228 GPR183P32249 361 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms