RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 CIRBPQ14011 172 aaKnown RBP4.25□□□□□ -1.73
VPS13D-213ENST00000613099 ATXN8Q156A1 80 aa4.25□□□□□ -1.73
VPS13D-213ENST00000613099 H7C2G1 150 aa4.25□□□□□ -1.73
VPS13D-213ENST00000613099 EPPINO95925 133 aa4.25□□□□□ -1.73
VPS13D-213ENST00000613099 C3orf79P0CE67 100 aa4.25□□□□□ -1.73
VPS13D-213ENST00000613099 ARL14EPLP0DKL9 152 aa4.25□□□□□ -1.73
VPS13D-213ENST00000613099 CXorf66Q5JRM2 361 aaPredicted RBP4.25□□□□□ -1.73
VPS13D-213ENST00000613099 TMEM215Q68D42 235 aa4.25□□□□□ -1.73
VPS13D-213ENST00000613099 LYPD6BQ8NI32 183 aa4.25□□□□□ -1.73
VPS13D-213ENST00000613099 POLDIP2Q9Y2S7 368 aa4.25□□□□□ -1.73
VPS13D-213ENST00000613099 SNAI2O43623 268 aa4.25□□□□□ -1.73
VPS13D-213ENST00000613099 ZNF883P0CG24 379 aa4.25□□□□□ -1.73
VPS13D-213ENST00000613099 MOGAT3Q86VF5 341 aa4.25□□□□□ -1.73
VPS13D-213ENST00000613099 BCORP1Q8N888 145 aa4.25□□□□□ -1.73
VPS13D-213ENST00000613099 LILRA1O75019 489 aa4.25□□□□□ -1.73
VPS13D-213ENST00000613099 ORM2P19652 201 aa4.25□□□□□ -1.73
VPS13D-213ENST00000613099 YBX1P67809 324 aaKnown RBP4.25□□□□□ -1.73
VPS13D-213ENST00000613099 TBR1Q16650 682 aa4.25□□□□□ -1.73
VPS13D-213ENST00000613099 UNQ6494/PRO21346Q6UXR6 183 aa4.25□□□□□ -1.73
VPS13D-213ENST00000613099 WNT6Q9Y6F9 365 aa4.25□□□□□ -1.73
VPS13D-213ENST00000613099 M0R135 149 aa4.25□□□□□ -1.73
VPS13D-213ENST00000613099 TNFRSF6BO95407 300 aa4.25□□□□□ -1.73
VPS13D-213ENST00000613099 SRD5A2P31213 254 aa4.25□□□□□ -1.73
VPS13D-213ENST00000613099 ADMP35318 185 aa4.25□□□□□ -1.73
VPS13D-213ENST00000613099 C18orf32Q8TCD1 76 aa4.25□□□□□ -1.73
VPS13D-213ENST00000613099 CYB5D2Q8WUJ1 264 aa4.25□□□□□ -1.73
VPS13D-213ENST00000613099 ZNF799Q96GE5 643 aa4.25□□□□□ -1.73
VPS13D-213ENST00000613099 SMIM14Q96QK8 99 aa4.25□□□□□ -1.73
VPS13D-213ENST00000613099 A0A1W2PS18 150 aa4.25□□□□□ -1.73
VPS13D-213ENST00000613099 TEPPQ6URK8 271 aa4.25□□□□□ -1.73
VPS13D-213ENST00000613099 NT5CQ8TCD5 201 aa4.25□□□□□ -1.73
VPS13D-213ENST00000613099 ZNF296Q8WUU4 475 aaPredicted RBP4.25□□□□□ -1.73
VPS13D-213ENST00000613099 OCIAD1Q9NX40 245 aa4.25□□□□□ -1.73
VPS13D-213ENST00000613099 PRNDQ9UKY0 176 aa4.25□□□□□ -1.73
VPS13D-213ENST00000613099 TRGV10A0A0A0MS01 117 aa4.25□□□□□ -1.73
VPS13D-213ENST00000613099 HSPB6O14558 160 aa4.25□□□□□ -1.73
VPS13D-213ENST00000613099 PIN1P1O15428 100 aa4.25□□□□□ -1.73
VPS13D-213ENST00000613099 DPM2O94777 84 aa4.25□□□□□ -1.73
VPS13D-213ENST00000613099 PPP1R17O96001 155 aa4.25□□□□□ -1.73
VPS13D-213ENST00000613099 REG1BP48304 166 aa4.25□□□□□ -1.73
VPS13D-213ENST00000613099 OXGR1Q96P68 337 aa4.25□□□□□ -1.73
VPS13D-213ENST00000613099 IL36GQ9NZH8 169 aa4.25□□□□□ -1.73
VPS13D-213ENST00000613099 IGLC1P0CG04 106 aa4.25□□□□□ -1.73
VPS13D-213ENST00000613099 RPL31P62899 125 aaKnown RBP4.25□□□□□ -1.73
VPS13D-213ENST00000613099 RHOGP84095 191 aa4.25□□□□□ -1.73
VPS13D-213ENST00000613099 VGLL1Q99990 258 aa4.25□□□□□ -1.73
VPS13D-213ENST00000613099 DEFB126Q9BYW3 111 aa4.25□□□□□ -1.73
VPS13D-213ENST00000613099 DNAJB12Q9NXW2 375 aaKnown RBP4.25□□□□□ -1.73
VPS13D-213ENST00000613099 ETDBQ3ZM63 59 aa4.25□□□□□ -1.73
VPS13D-213ENST00000613099 LDB3O75112 727 aa4.25□□□□□ -1.73
VPS13D-213ENST00000613099 COX8AP10176 69 aa4.25□□□□□ -1.73
VPS13D-213ENST00000613099 GCHFRP30047 84 aa4.25□□□□□ -1.73
VPS13D-213ENST00000613099 CENPWQ5EE01 88 aa4.25□□□□□ -1.73
VPS13D-213ENST00000613099 LINC00696Q6ZRV3 163 aa4.25□□□□□ -1.73
VPS13D-213ENST00000613099 ROS1P08922 2347 aa4.24□□□□□ -1.73
VPS13D-213ENST00000613099 C5orf49A4QMS7 147 aa4.24□□□□□ -1.73
VPS13D-213ENST00000613099 DEFA4P12838 97 aa4.24□□□□□ -1.73
VPS13D-213ENST00000613099 LOC389332A0A1B0GUA5 103 aa4.24□□□□□ -1.73
VPS13D-213ENST00000613099 PAXXQ9BUH6 204 aa4.24□□□□□ -1.73
VPS13D-213ENST00000613099 A0A1W2PPI3 338 aa4.24□□□□□ -1.73
VPS13D-213ENST00000613099 C5orf67F2Z3F1 127 aa4.24□□□□□ -1.73
VPS13D-213ENST00000613099 PFN1P07737 140 aaKnown RBP4.24□□□□□ -1.73
VPS13D-213ENST00000613099 KLRD1Q13241 179 aa4.24□□□□□ -1.73
VPS13D-213ENST00000613099 ZNF56Q15929 161 aa4.24□□□□□ -1.73
VPS13D-213ENST00000613099 SLC23A3Q6PIS1 610 aa4.24□□□□□ -1.73
VPS13D-213ENST00000613099 SHISA3A0PJX4 238 aa4.24□□□□□ -1.73
VPS13D-213ENST00000613099 TMEM30CPA0ZSE6 113 aa4.24□□□□□ -1.73
VPS13D-213ENST00000613099 H0YGG7 62 aa4.24□□□□□ -1.73
VPS13D-213ENST00000613099 ZNF688P0C7X2 276 aa4.24□□□□□ -1.73
VPS13D-213ENST00000613099 DUSP2Q05923 314 aa4.24□□□□□ -1.73
VPS13D-213ENST00000613099 Q6AWC8 147 aa4.24□□□□□ -1.73
VPS13D-213ENST00000613099 FBLN5Q9UBX5 448 aa4.24□□□□□ -1.73
VPS13D-213ENST00000613099 HOXD9P28356 352 aaPredicted RBP4.24□□□□□ -1.73
VPS13D-213ENST00000613099 TMEM25Q86YD3 366 aa4.24□□□□□ -1.73
VPS13D-213ENST00000613099 COL6A6A6NMZ7 2263 aa4.24□□□□□ -1.73
VPS13D-213ENST00000613099 RAC3P60763 192 aa4.24□□□□□ -1.73
VPS13D-213ENST00000613099 CDPF1Q6NVV7 123 aa4.24□□□□□ -1.73
VPS13D-213ENST00000613099 BMPERQ8N8U9 685 aa4.24□□□□□ -1.73
VPS13D-213ENST00000613099 NUP37Q8NFH4 326 aa4.24□□□□□ -1.73
VPS13D-213ENST00000613099 OR10AC1Q8NH08 325 aa4.24□□□□□ -1.73
VPS13D-213ENST00000613099 ZNF519Q8TB69 540 aa4.24□□□□□ -1.73
VPS13D-213ENST00000613099 C11orf68Q9H3H3 251 aaKnown RBP4.24□□□□□ -1.73
VPS13D-213ENST00000613099 MBNL3Q9NUK0 354 aaKnown RBP4.24□□□□□ -1.73
VPS13D-213ENST00000613099 MYO7BQ6PIF6 2116 aa4.24□□□□□ -1.73
VPS13D-213ENST00000613099 CDKN1AP38936 164 aa4.24□□□□□ -1.73
VPS13D-213ENST00000613099 MAFAQ8NHW3 353 aaPredicted RBP4.24□□□□□ -1.73
VPS13D-213ENST00000613099 GNG5P63218 68 aa4.24□□□□□ -1.73
VPS13D-213ENST00000613099 PSG6Q00889 435 aa4.24□□□□□ -1.73
VPS13D-213ENST00000613099 SYT8Q8NBV8 401 aa4.24□□□□□ -1.73
VPS13D-213ENST00000613099 C18orf12Q96KH6 178 aa4.24□□□□□ -1.73
VPS13D-213ENST00000613099 DYNLRB1Q9NP97 96 aa4.24□□□□□ -1.73
VPS13D-213ENST00000613099 ZDHHC16Q969W1 377 aa4.24□□□□□ -1.73
VPS13D-213ENST00000613099 FLYWCH2Q96CP2 140 aaKnown RBP4.24□□□□□ -1.73
VPS13D-213ENST00000613099 A0A0J9YY10 115 aa4.24□□□□□ -1.73
VPS13D-213ENST00000613099 PRSS2P07478 247 aa4.24□□□□□ -1.73
VPS13D-213ENST00000613099 ZNF83P51522 516 aa4.24□□□□□ -1.73
VPS13D-213ENST00000613099 GFRA1P56159 465 aa4.24□□□□□ -1.73
VPS13D-213ENST00000613099 ZNF141Q15928 474 aa4.24□□□□□ -1.73
VPS13D-213ENST00000613099 CEACAM21Q3KPI0 293 aa4.24□□□□□ -1.73
VPS13D-213ENST00000613099 TMEM160Q9NX00 188 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms