RNA–Protein interactions for RNA: ENST00000612509.4

SEMA3B-211, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-211ENST00000612509 IL6RP08887 468 aaPredicted RBP13.96□□□□□ -0.17
SEMA3B-211ENST00000612509 RPA2P15927 270 aa13.96□□□□□ -0.17
SEMA3B-211ENST00000612509 HOXD3P31249 432 aaPredicted RBP13.96□□□□□ -0.17
SEMA3B-211ENST00000612509 RND3P61587 244 aa13.96□□□□□ -0.17
SEMA3B-211ENST00000612509 MEF2DQ14814 521 aa13.96□□□□□ -0.17
SEMA3B-211ENST00000612509 SCGB2B2Q4G0G5 96 aa13.96□□□□□ -0.17
SEMA3B-211ENST00000612509 REC114Q7Z4M0 266 aa13.96□□□□□ -0.17
SEMA3B-211ENST00000612509 TTC9CQ8N5M4 171 aa13.96□□□□□ -0.17
SEMA3B-211ENST00000612509 ZNF486Q96H40 463 aaPredicted RBP13.96□□□□□ -0.17
SEMA3B-211ENST00000612509 SOSTQ9BQB4 213 aa13.96□□□□□ -0.17
SEMA3B-211ENST00000612509 FAM212BQ9NTI7 297 aaPredicted RBP13.96□□□□□ -0.17
SEMA3B-211ENST00000612509 AURKAIP1Q9NWT8 199 aaPredicted RBP13.96□□□□□ -0.17
SEMA3B-211ENST00000612509 FABP12A6NFH5 140 aa13.95□□□□□ -0.18
SEMA3B-211ENST00000612509 RBMXL2O75526 392 aaKnown RBP13.95□□□□□ -0.18
SEMA3B-211ENST00000612509 PRH1P02810 166 aa13.95□□□□□ -0.18
SEMA3B-211ENST00000612509 FGF2P09038 288 aa13.95□□□□□ -0.18
SEMA3B-211ENST00000612509 PI3P19957 117 aa13.95□□□□□ -0.18
SEMA3B-211ENST00000612509 SLURP1P55000 103 aa13.95□□□□□ -0.18
SEMA3B-211ENST00000612509 ZNF45Q02386 682 aa13.95□□□□□ -0.18
SEMA3B-211ENST00000612509 EGFEM1PQ0D2K5 195 aa13.95□□□□□ -0.18
SEMA3B-211ENST00000612509 SLC25A42Q86VD7 318 aa13.95□□□□□ -0.18
SEMA3B-211ENST00000612509 OR4C16Q8NGL9 310 aa13.95□□□□□ -0.18
SEMA3B-211ENST00000612509 ZNF257Q9Y2Q1 563 aa13.95□□□□□ -0.18
SEMA3B-211ENST00000612509 DPPA5A6NC42 116 aa13.94□□□□□ -0.18
SEMA3B-211ENST00000612509 CGB1A6NKQ9 187 aa13.94□□□□□ -0.18
SEMA3B-211ENST00000612509 NPIPB5A8MRT5 1133 aa13.94□□□□□ -0.18
SEMA3B-211ENST00000612509 HSPB1P04792 205 aaKnown RBP13.94□□□□□ -0.18
SEMA3B-211ENST00000612509 AKAIN1P0CW23 69 aa13.94□□□□□ -0.18
SEMA3B-211ENST00000612509 AREGP15514 252 aa13.94□□□□□ -0.18
SEMA3B-211ENST00000612509 G6PCP35575 357 aa13.94□□□□□ -0.18
SEMA3B-211ENST00000612509 PIGPP57054 158 aa13.94□□□□□ -0.18
SEMA3B-211ENST00000612509 OR2B8PP59922 312 aa13.94□□□□□ -0.18
SEMA3B-211ENST00000612509 OR13C8Q8NGS7 320 aa13.94□□□□□ -0.18
SEMA3B-211ENST00000612509 TERB2Q8NHR7 220 aa13.94□□□□□ -0.18
SEMA3B-211ENST00000612509 USMG5Q96IX5 58 aa13.94□□□□□ -0.18
SEMA3B-211ENST00000612509 TRBV9A0A0B4J1U6 114 aa13.93□□□□□ -0.18
SEMA3B-211ENST00000612509 ANKRD20A5PA0PJZ0 165 aa13.93□□□□□ -0.18
SEMA3B-211ENST00000612509 FAM223BA6NKX1 122 aa13.93□□□□□ -0.18
SEMA3B-211ENST00000612509 SEC14L6B5MCN3 397 aa13.93□□□□□ -0.18
SEMA3B-211ENST00000612509 DISC1C4P0D8 188 aa13.93□□□□□ -0.18
SEMA3B-211ENST00000612509 KRASP01116 189 aa13.93□□□□□ -0.18
SEMA3B-211ENST00000612509 PTBP1P26599 531 aaKnown RBP eCLIP13.93□□□□□ -0.18
SEMA3B-211ENST00000612509 S100A5P33763 92 aa13.93□□□□□ -0.18
SEMA3B-211ENST00000612509 KRTAP10-11P60412 298 aa13.93□□□□□ -0.18
SEMA3B-211ENST00000612509 RHOGP84095 191 aa13.93□□□□□ -0.18
SEMA3B-211ENST00000612509 C9orf66Q5T8R8 295 aa13.93□□□□□ -0.18
SEMA3B-211ENST00000612509 C19orf35Q6ZS72 473 aa13.93□□□□□ -0.18
SEMA3B-211ENST00000612509 FAM223AQ8IWN6 122 aa13.93□□□□□ -0.18
SEMA3B-211ENST00000612509 DCUN1D4Q92564 292 aa13.93□□□□□ -0.18
SEMA3B-211ENST00000612509 MRGPRFQ96AM1 343 aa13.93□□□□□ -0.18
SEMA3B-211ENST00000612509 COMMD5Q9GZQ3 224 aa13.93□□□□□ -0.18
SEMA3B-211ENST00000612509 V9GYH0 126 aa13.93□□□□□ -0.18
SEMA3B-211ENST00000612509 H0Y980 276 aa13.92□□□□□ -0.18
SEMA3B-211ENST00000612509 OVOL1O14753 267 aa13.92□□□□□ -0.18
SEMA3B-211ENST00000612509 IGKV1-39P01597 117 aa13.92□□□□□ -0.18
SEMA3B-211ENST00000612509 IGKV1D-39P04432 117 aa13.92□□□□□ -0.18
SEMA3B-211ENST00000612509 PSMB6P28072 239 aa13.92□□□□□ -0.18
SEMA3B-211ENST00000612509 ECI1P42126 302 aa13.92□□□□□ -0.18
SEMA3B-211ENST00000612509 CADM3Q8N126 398 aa13.92□□□□□ -0.18
SEMA3B-211ENST00000612509 CCDC71LQ8N9Z2 235 aa13.92□□□□□ -0.18
SEMA3B-211ENST00000612509 ZFAND1Q8TCF1 268 aa13.92□□□□□ -0.18
SEMA3B-211ENST00000612509 MARCH1Q8TCQ1 289 aa13.92□□□□□ -0.18
SEMA3B-211ENST00000612509 DLX4Q92988 240 aaPredicted RBP13.92□□□□□ -0.18
SEMA3B-211ENST00000612509 QTRT1Q9BXR0 403 aaKnown RBP13.92□□□□□ -0.18
SEMA3B-211ENST00000612509 AKIP1Q9NQ31 210 aa13.92□□□□□ -0.18
SEMA3B-211ENST00000612509 COPZ2Q9P299 210 aa13.92□□□□□ -0.18
SEMA3B-211ENST00000612509 IGLC7A0M8Q6 106 aa13.91□□□□□ -0.18
SEMA3B-211ENST00000612509 ANKRD34BA5PLL1 514 aa13.91□□□□□ -0.18
SEMA3B-211ENST00000612509 OR2J3O76001 311 aa13.91□□□□□ -0.18
SEMA3B-211ENST00000612509 CRYGCP07315 174 aa13.91□□□□□ -0.18
SEMA3B-211ENST00000612509 CTSDP07339 412 aaPredicted RBP13.91□□□□□ -0.18
SEMA3B-211ENST00000612509 CTRB1P17538 263 aa13.91□□□□□ -0.18
SEMA3B-211ENST00000612509 EXOSC2Q13868 293 aaKnown RBP13.91□□□□□ -0.18
SEMA3B-211ENST00000612509 ZNF79Q15937 498 aa13.91□□□□□ -0.18
SEMA3B-211ENST00000612509 CTRB2Q6GPI1 263 aa13.91□□□□□ -0.18
SEMA3B-211ENST00000612509 THOC7Q6I9Y2 204 aaKnown RBP13.91□□□□□ -0.18
SEMA3B-211ENST00000612509 ZNF343Q6P1L6 599 aa13.91□□□□□ -0.18
SEMA3B-211ENST00000612509 NECAP1Q8NC96 275 aa13.91□□□□□ -0.18
SEMA3B-211ENST00000612509 TRIM63Q969Q1 353 aa13.91□□□□□ -0.18
SEMA3B-211ENST00000612509 PRRT1Q99946 306 aa13.91□□□□□ -0.18
SEMA3B-211ENST00000612509 SRSF8Q9BRL6 282 aaKnown RBP13.91□□□□□ -0.18
SEMA3B-211ENST00000612509 RANGRFQ9HD47 186 aaPredicted RBP13.91□□□□□ -0.18
SEMA3B-211ENST00000612509 NSG2Q9Y328 171 aa13.91□□□□□ -0.18
SEMA3B-211ENST00000612509 TRBV12-3P01733 135 aa13.9□□□□□ -0.18
SEMA3B-211ENST00000612509 REG1AP05451 166 aa13.9□□□□□ -0.18
SEMA3B-211ENST00000612509 SERPINE2P07093 398 aa13.9□□□□□ -0.18
SEMA3B-211ENST00000612509 ZP3P21754 424 aa13.9□□□□□ -0.18
SEMA3B-211ENST00000612509 SURF2Q15527 256 aaPredicted RBP13.9□□□□□ -0.18
SEMA3B-211ENST00000612509 PYDC2Q56P42 97 aa13.9□□□□□ -0.18
SEMA3B-211ENST00000612509 CCDC190Q86UF4 302 aa13.9□□□□□ -0.18
SEMA3B-211ENST00000612509 MRAPQ8TCY5 172 aa13.9□□□□□ -0.18
SEMA3B-211ENST00000612509 SEC22AQ96IW7 307 aa13.9□□□□□ -0.18
SEMA3B-211ENST00000612509 TP53RKQ96S44 253 aa13.9□□□□□ -0.18
SEMA3B-211ENST00000612509 TSC22D3Q99576 134 aa13.9□□□□□ -0.18
SEMA3B-211ENST00000612509 SLC2A8Q9NY64 477 aa13.9□□□□□ -0.18
SEMA3B-211ENST00000612509 C14orf166Q9Y224 244 aaKnown RBP13.9□□□□□ -0.18
SEMA3B-211ENST00000612509 C15orf61A6NNL5 157 aa13.89□□□□□ -0.19
SEMA3B-211ENST00000612509 SNAPC5O75971 98 aa13.89□□□□□ -0.19
SEMA3B-211ENST00000612509 DHFRP00374 187 aa13.89□□□□□ -0.19
SEMA3B-211ENST00000612509 ATP5G2Q06055 141 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms