RNA–Protein interactions for RNA: ENST00000610454.4

SENP3-209, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-209ENST00000610454 LPAR6P43657 344 aa10.32□□□□□ -0.76
SENP3-209ENST00000610454 TAS2R19P59542 299 aa10.32□□□□□ -0.76
SENP3-209ENST00000610454 EXOSC2Q13868 293 aaKnown RBP10.32□□□□□ -0.76
SENP3-209ENST00000610454 IL18Q14116 193 aa10.32□□□□□ -0.76
SENP3-209ENST00000610454 POU2AF1Q16633 256 aa10.32□□□□□ -0.76
SENP3-209ENST00000610454 TATDN3Q17R31 274 aa10.32□□□□□ -0.76
SENP3-209ENST00000610454 RPEL1Q2QD12 228 aa10.32□□□□□ -0.76
SENP3-209ENST00000610454 FAM209BQ5JX69 171 aa10.32□□□□□ -0.76
SENP3-209ENST00000610454 ZNF343Q6P1L6 599 aa10.32□□□□□ -0.76
SENP3-209ENST00000610454 ARRDC1Q8N5I2 433 aa10.32□□□□□ -0.76
SENP3-209ENST00000610454 NECAP1Q8NC96 275 aa10.32□□□□□ -0.76
SENP3-209ENST00000610454 DYNC2LI1Q8TCX1 351 aa10.32□□□□□ -0.76
SENP3-209ENST00000610454 ISOC1Q96CN7 298 aa10.32□□□□□ -0.76
SENP3-209ENST00000610454 DIRAS2Q96HU8 199 aa10.32□□□□□ -0.76
SENP3-209ENST00000610454 ABHD1Q96SE0 405 aa10.32□□□□□ -0.76
SENP3-209ENST00000610454 RSRP1Q9BUV0 290 aa10.32□□□□□ -0.76
SENP3-209ENST00000610454 MIXL1Q9H2W2 232 aa10.32□□□□□ -0.76
SENP3-209ENST00000610454 AKIP1Q9NQ31 210 aa10.32□□□□□ -0.76
SENP3-209ENST00000610454 SLC2A9Q9NRM0 540 aa10.32□□□□□ -0.76
SENP3-209ENST00000610454 RABL2AQ9UBK7 228 aaPredicted RBP10.32□□□□□ -0.76
SENP3-209ENST00000610454 RABL2BQ9UNT1 228 aa10.32□□□□□ -0.76
SENP3-209ENST00000610454 TEX22C9J3V5 150 aa10.31□□□□□ -0.76
SENP3-209ENST00000610454 H3BMQ9 156 aa10.31□□□□□ -0.76
SENP3-209ENST00000610454 UPK2O00526 184 aa10.31□□□□□ -0.76
SENP3-209ENST00000610454 CYB5BO43169 146 aa10.31□□□□□ -0.76
SENP3-209ENST00000610454 SNAPC5O75971 98 aa10.31□□□□□ -0.76
SENP3-209ENST00000610454 KRASP01116 189 aa10.31□□□□□ -0.76
SENP3-209ENST00000610454 IL6RP08887 468 aaPredicted RBP10.31□□□□□ -0.76
SENP3-209ENST00000610454 UCP3P55916 312 aa10.31□□□□□ -0.76
SENP3-209ENST00000610454 SSBP1Q04837 148 aaKnown RBP10.31□□□□□ -0.76
SENP3-209ENST00000610454 TBC1D26Q86UD7 250 aa10.31□□□□□ -0.76
SENP3-209ENST00000610454 OR6Q1Q8NGQ2 317 aa10.31□□□□□ -0.76
SENP3-209ENST00000610454 ZNF256Q9Y2P7 627 aaPredicted RBP10.31□□□□□ -0.76
SENP3-209ENST00000610454 TRBV9A0A0B4J1U6 114 aa10.3□□□□□ -0.76
SENP3-209ENST00000610454 OR2J3O76001 311 aa10.3□□□□□ -0.76
SENP3-209ENST00000610454 RAB3DO95716 219 aa10.3□□□□□ -0.76
SENP3-209ENST00000610454 FGF2P09038 288 aa10.3□□□□□ -0.76
SENP3-209ENST00000610454 AREGP15514 252 aa10.3□□□□□ -0.76
SENP3-209ENST00000610454 HIST1H1BP16401 226 aaKnown RBP10.3□□□□□ -0.76
SENP3-209ENST00000610454 PSMB6P28072 239 aa10.3□□□□□ -0.76
SENP3-209ENST00000610454 G6PCP35575 357 aa10.3□□□□□ -0.76
SENP3-209ENST00000610454 PPP5CP53041 499 aa10.3□□□□□ -0.76
SENP3-209ENST00000610454 C15orf32Q32M92 178 aa10.3□□□□□ -0.76
SENP3-209ENST00000610454 SCGB2B2Q4G0G5 96 aa10.3□□□□□ -0.76
SENP3-209ENST00000610454 THOC7Q6I9Y2 204 aaKnown RBP10.3□□□□□ -0.76
SENP3-209ENST00000610454 STEAP1BQ6NZ63 245 aa10.3□□□□□ -0.76
SENP3-209ENST00000610454 ACSM6Q6P461 480 aa10.3□□□□□ -0.76
SENP3-209ENST00000610454 TMEM229BQ8NBD8 167 aa10.3□□□□□ -0.76
SENP3-209ENST00000610454 ZNF486Q96H40 463 aaPredicted RBP10.3□□□□□ -0.76
SENP3-209ENST00000610454 PRR25Q96S07 402 aa10.3□□□□□ -0.76
SENP3-209ENST00000610454 TSC22D3Q99576 134 aa10.3□□□□□ -0.76
SENP3-209ENST00000610454 QTRT1Q9BXR0 403 aaKnown RBP10.3□□□□□ -0.76
SENP3-209ENST00000610454 FAM212BQ9NTI7 297 aaPredicted RBP10.3□□□□□ -0.76
SENP3-209ENST00000610454 FBXL7Q9UJT9 491 aa10.3□□□□□ -0.76
SENP3-209ENST00000610454 E7EUB6 86 aa10.29□□□□□ -0.76
SENP3-209ENST00000610454 REG1AP05451 166 aa10.29□□□□□ -0.76
SENP3-209ENST00000610454 SERPINE2P07093 398 aa10.29□□□□□ -0.76
SENP3-209ENST00000610454 MYOD1P15172 320 aa10.29□□□□□ -0.76
SENP3-209ENST00000610454 SYNJ2BPP57105 145 aa10.29□□□□□ -0.76
SENP3-209ENST00000610454 OR2B8PP59922 312 aa10.29□□□□□ -0.76
SENP3-209ENST00000610454 ZNF45Q02386 682 aa10.29□□□□□ -0.76
SENP3-209ENST00000610454 CD69Q07108 199 aa10.29□□□□□ -0.76
SENP3-209ENST00000610454 MEF2DQ14814 521 aa10.29□□□□□ -0.76
SENP3-209ENST00000610454 HSD17B13Q7Z5P4 300 aaPredicted RBP10.29□□□□□ -0.76
SENP3-209ENST00000610454 CCDC71LQ8N9Z2 235 aa10.29□□□□□ -0.76
SENP3-209ENST00000610454 OR1L8Q8NGR8 309 aa10.29□□□□□ -0.76
SENP3-209ENST00000610454 MCFD2Q8NI22 146 aa10.29□□□□□ -0.76
SENP3-209ENST00000610454 ZFAND1Q8TCF1 268 aa10.29□□□□□ -0.76
SENP3-209ENST00000610454 SMIM4Q8WVI0 70 aa10.29□□□□□ -0.76
SENP3-209ENST00000610454 SRSF8Q9BRL6 282 aaKnown RBP10.29□□□□□ -0.76
SENP3-209ENST00000610454 HINT2Q9BX68 163 aa10.29□□□□□ -0.76
SENP3-209ENST00000610454 FKBP11Q9NYL4 201 aa10.29□□□□□ -0.76
SENP3-209ENST00000610454 THYN1Q9P016 225 aa10.29□□□□□ -0.76
SENP3-209ENST00000610454 RSL24D1Q9UHA3 163 aaKnown RBP10.29□□□□□ -0.76
SENP3-209ENST00000610454 SORL1Q92673 2214 aa10.28□□□□□ -0.76
SENP3-209ENST00000610454 TRAV3A0A0B4J244 114 aa10.28□□□□□ -0.76
SENP3-209ENST00000610454 DISC1C4P0D8 188 aa10.28□□□□□ -0.76
SENP3-209ENST00000610454 CRYGCP07315 174 aa10.28□□□□□ -0.76
SENP3-209ENST00000610454 TRAPPC2P0DI81 140 aa10.28□□□□□ -0.76
SENP3-209ENST00000610454 TRAPPC2BP0DI82 140 aa10.28□□□□□ -0.76
SENP3-209ENST00000610454 CTRB1P17538 263 aa10.28□□□□□ -0.76
SENP3-209ENST00000610454 MECP2P51608 486 aaKnown RBP10.28□□□□□ -0.76
SENP3-209ENST00000610454 PIGPP57054 158 aa10.28□□□□□ -0.76
SENP3-209ENST00000610454 KLF5Q13887 457 aaPredicted RBP10.28□□□□□ -0.76
SENP3-209ENST00000610454 ZNF585BQ52M93 769 aa10.28□□□□□ -0.76
SENP3-209ENST00000610454 CTRB2Q6GPI1 263 aa10.28□□□□□ -0.76
SENP3-209ENST00000610454 H2BFWTQ7Z2G1 175 aa10.28□□□□□ -0.76
SENP3-209ENST00000610454 TERB2Q8NHR7 220 aa10.28□□□□□ -0.76
SENP3-209ENST00000610454 EEF1AKMT3Q96AZ1 226 aa10.28□□□□□ -0.76
SENP3-209ENST00000610454 COPZ2Q9P299 210 aa10.28□□□□□ -0.76
SENP3-209ENST00000610454 PEMTQ9UBM1 199 aa10.28□□□□□ -0.76
SENP3-209ENST00000610454 PRNDQ9UKY0 176 aa10.28□□□□□ -0.76
SENP3-209ENST00000610454 DNAH3Q8TD57 4116 aa10.28□□□□□ -0.76
SENP3-209ENST00000610454 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.27□□□□□ -0.77
SENP3-209ENST00000610454 A0A1B0GW64 132 aa10.27□□□□□ -0.77
SENP3-209ENST00000610454 CTDSPLO15194 276 aa10.27□□□□□ -0.77
SENP3-209ENST00000610454 RBMXL2O75526 392 aaKnown RBP10.27□□□□□ -0.77
SENP3-209ENST00000610454 ATG12O94817 140 aa10.27□□□□□ -0.77
SENP3-209ENST00000610454 TRBV12-3P01733 135 aa10.27□□□□□ -0.77
SENP3-209ENST00000610454 CD74P04233 296 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms