RNA–Protein interactions for RNA: ENST00000606952.5

PMF1-206, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 1,275 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-206ENST00000606952 TAS2R30P59541 319 aa13.15□□□□□ -0.3
PMF1-206ENST00000606952 OR2B8PP59922 312 aa13.15□□□□□ -0.3
PMF1-206ENST00000606952 HSPE1P61604 102 aaKnown RBP13.15□□□□□ -0.3
PMF1-206ENST00000606952 Q6YL49 198 aa13.15□□□□□ -0.3
PMF1-206ENST00000606952 Q8N9W7 124 aa13.15□□□□□ -0.3
PMF1-206ENST00000606952 FBXL15Q9H469 300 aa13.15□□□□□ -0.3
PMF1-206ENST00000606952 ZNF430Q9H8G1 570 aaPredicted RBP13.15□□□□□ -0.3
PMF1-206ENST00000606952 KIAA1456Q9P272 454 aa13.15□□□□□ -0.3
PMF1-206ENST00000606952 H3BUX3 64 aa13.14□□□□□ -0.31
PMF1-206ENST00000606952 SYNGR2O43760 224 aa13.14□□□□□ -0.31
PMF1-206ENST00000606952 LY6G6DO95868 133 aa13.14□□□□□ -0.31
PMF1-206ENST00000606952 SCGB1D2O95969 90 aa13.14□□□□□ -0.31
PMF1-206ENST00000606952 RLN2P04090 185 aa13.14□□□□□ -0.31
PMF1-206ENST00000606952 IER3P46695 156 aa13.14□□□□□ -0.31
PMF1-206ENST00000606952 S100A10P60903 97 aa13.14□□□□□ -0.31
PMF1-206ENST00000606952 POLR2GP62487 172 aaKnown RBP eCLIP13.14□□□□□ -0.31
PMF1-206ENST00000606952 PRCDQ00LT1 54 aa13.14□□□□□ -0.31
PMF1-206ENST00000606952 LRRC37A5PQ49AS3 106 aa13.14□□□□□ -0.31
PMF1-206ENST00000606952 OR5R1Q8NH85 324 aa13.14□□□□□ -0.31
PMF1-206ENST00000606952 THAP6Q8TBB0 222 aa13.14□□□□□ -0.31
PMF1-206ENST00000606952 ZNF48Q96MX3 618 aaPredicted RBP13.14□□□□□ -0.31
PMF1-206ENST00000606952 RAB40CQ96S21 281 aa13.14□□□□□ -0.31
PMF1-206ENST00000606952 OR5AC2Q9NZP5 309 aa13.14□□□□□ -0.31
PMF1-206ENST00000606952 MBD2Q9UBB5 411 aa13.14□□□□□ -0.31
PMF1-206ENST00000606952 PITPNC1Q9UKF7 332 aa13.14□□□□□ -0.31
PMF1-206ENST00000606952 OR51B2Q9Y5P1 312 aa13.14□□□□□ -0.31
PMF1-206ENST00000606952 MDFIC2A0A1B0GVS7 189 aa13.13□□□□□ -0.31
PMF1-206ENST00000606952 E5RGE8 158 aa13.13□□□□□ -0.31
PMF1-206ENST00000606952 BOLA2-SMG1P6H3BVE0 249 aa13.13□□□□□ -0.31
PMF1-206ENST00000606952 HLA-DRB1P01911 266 aa13.13□□□□□ -0.31
PMF1-206ENST00000606952 VDAC2P45880 294 aaPredicted RBP13.13□□□□□ -0.31
PMF1-206ENST00000606952 SSBP2P81877 361 aaPredicted RBP13.13□□□□□ -0.31
PMF1-206ENST00000606952 OR1L8Q8NGR8 309 aa13.13□□□□□ -0.31
PMF1-206ENST00000606952 CIB3Q96Q77 187 aaPredicted RBP13.13□□□□□ -0.31
PMF1-206ENST00000606952 SMR3AQ99954 134 aa13.13□□□□□ -0.31
PMF1-206ENST00000606952 RBKSQ9H477 322 aa13.13□□□□□ -0.31
PMF1-206ENST00000606952 NDUFA4L2Q9NRX3 87 aa13.13□□□□□ -0.31
PMF1-206ENST00000606952 TNFSF18Q9UNG2 199 aa13.13□□□□□ -0.31
PMF1-206ENST00000606952 MOB4Q9Y3A3 225 aa13.13□□□□□ -0.31
PMF1-206ENST00000606952 LSM5Q9Y4Y9 91 aaKnown RBP13.13□□□□□ -0.31
PMF1-206ENST00000606952 WSB1Q9Y6I7 421 aa13.13□□□□□ -0.31
PMF1-206ENST00000606952 TEX50A0A1B0GTY4 177 aa13.12□□□□□ -0.31
PMF1-206ENST00000606952 CGB1A6NKQ9 187 aa13.12□□□□□ -0.31
PMF1-206ENST00000606952 TSC22D2O75157 780 aa13.12□□□□□ -0.31
PMF1-206ENST00000606952 TMEM50AO95807 157 aa13.12□□□□□ -0.31
PMF1-206ENST00000606952 HNRNPCP07910 306 aaKnown RBP eCLIP13.12□□□□□ -0.31
PMF1-206ENST00000606952 PVALBP20472 110 aaPredicted RBP13.12□□□□□ -0.31
PMF1-206ENST00000606952 P2RY1P47900 373 aa13.12□□□□□ -0.31
PMF1-206ENST00000606952 COMPP49747 757 aaPredicted RBP13.12□□□□□ -0.31
PMF1-206ENST00000606952 PAX9P55771 341 aa13.12□□□□□ -0.31
PMF1-206ENST00000606952 SCGB2A2Q13296 93 aa13.12□□□□□ -0.31
PMF1-206ENST00000606952 HNF4GQ14541 408 aa13.12□□□□□ -0.31
PMF1-206ENST00000606952 TMEM86BQ8N661 226 aa13.12□□□□□ -0.31
PMF1-206ENST00000606952 C5orf56Q8N8D9 126 aa13.12□□□□□ -0.31
PMF1-206ENST00000606952 SMIM8Q96KF7 97 aa13.12□□□□□ -0.31
PMF1-206ENST00000606952 SRSF8Q9BRL6 282 aaKnown RBP13.12□□□□□ -0.31
PMF1-206ENST00000606952 SLC25A33Q9BSK2 321 aa13.12□□□□□ -0.31
PMF1-206ENST00000606952 COMMD5Q9GZQ3 224 aa13.12□□□□□ -0.31
PMF1-206ENST00000606952 PLXNB1O43157 2135 aa13.12□□□□□ -0.31
PMF1-206ENST00000606952 SONP18583 2426 aaKnown RBP13.11□□□□□ -0.31
PMF1-206ENST00000606952 M0QZK8 103 aa13.11□□□□□ -0.31
PMF1-206ENST00000606952 WRBO00258 174 aa13.11□□□□□ -0.31
PMF1-206ENST00000606952 CHST1O43916 411 aa13.11□□□□□ -0.31
PMF1-206ENST00000606952 SSSCA1O60232 199 aa13.11□□□□□ -0.31
PMF1-206ENST00000606952 RBMXL2O75526 392 aaKnown RBP13.11□□□□□ -0.31
PMF1-206ENST00000606952 PJVKQ0ZLH3 352 aa13.11□□□□□ -0.31
PMF1-206ENST00000606952 ZNF345Q14585 488 aa13.11□□□□□ -0.31
PMF1-206ENST00000606952 ZNF562Q6V9R5 426 aa13.11□□□□□ -0.31
PMF1-206ENST00000606952 DTD1Q8TEA8 209 aa13.11□□□□□ -0.31
PMF1-206ENST00000606952 SSMEM1Q8WWF3 244 aa13.11□□□□□ -0.31
PMF1-206ENST00000606952 AQP10Q96PS8 301 aa13.11□□□□□ -0.31
PMF1-206ENST00000606952 MAGT1Q9H0U3 335 aa13.11□□□□□ -0.31
PMF1-206ENST00000606952 LYRM2Q9NU23 88 aaPredicted RBP13.11□□□□□ -0.31
PMF1-206ENST00000606952 HIVEP1P15822 2718 aa13.11□□□□□ -0.31
PMF1-206ENST00000606952 FXYD6-FXYD2A0A087WZ82 144 aa13.1□□□□□ -0.31
PMF1-206ENST00000606952 A0A1B0GW64 132 aa13.1□□□□□ -0.31
PMF1-206ENST00000606952 A0A1W2PN81 502 aa13.1□□□□□ -0.31
PMF1-206ENST00000606952 RNF222A6NCQ9 220 aa13.1□□□□□ -0.31
PMF1-206ENST00000606952 GPR137BO60478 399 aa13.1□□□□□ -0.31
PMF1-206ENST00000606952 CA2P00918 260 aa13.1□□□□□ -0.31
PMF1-206ENST00000606952 IFNA17P01571 189 aa13.1□□□□□ -0.31
PMF1-206ENST00000606952 MYOD1P15172 320 aa13.1□□□□□ -0.31
PMF1-206ENST00000606952 CHRNA7P36544 502 aa13.1□□□□□ -0.31
PMF1-206ENST00000606952 SRP14P37108 136 aaKnown RBP13.1□□□□□ -0.31
PMF1-206ENST00000606952 RPL27AP46776 148 aaKnown RBP13.1□□□□□ -0.31
PMF1-206ENST00000606952 BSXQ3C1V8 233 aa13.1□□□□□ -0.31
PMF1-206ENST00000606952 IL17RELQ6ZVW7 336 aa13.1□□□□□ -0.31
PMF1-206ENST00000606952 ZDHHC16Q969W1 377 aa13.1□□□□□ -0.31
PMF1-206ENST00000606952 CDC42EP3Q9UKI2 254 aa13.1□□□□□ -0.31
PMF1-206ENST00000606952 VPREB3Q9UKI3 123 aa13.1□□□□□ -0.31
PMF1-206ENST00000606952 HIVEP2P31629 2446 aa13.09□□□□□ -0.31
PMF1-206ENST00000606952 NCBP2LA6PVI3 153 aaKnown RBP13.09□□□□□ -0.31
PMF1-206ENST00000606952 E7EUB6 86 aa13.09□□□□□ -0.31
PMF1-206ENST00000606952 FCN1O00602 326 aa13.09□□□□□ -0.31
PMF1-206ENST00000606952 NXPH3O95157 252 aa13.09□□□□□ -0.31
PMF1-206ENST00000606952 AMY1AP04745 511 aa13.09□□□□□ -0.31
PMF1-206ENST00000606952 ATP5IP56385 69 aaPredicted RBP13.09□□□□□ -0.31
PMF1-206ENST00000606952 PLGLAQ15195 96 aa13.09□□□□□ -0.31
PMF1-206ENST00000606952 TNXAQ16473 311 aa13.09□□□□□ -0.31
PMF1-206ENST00000606952 CLEC9AQ6UXN8 241 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms