RNA–Protein interactions for RNA: ENST00000606878.1

LINC00240-203, long intergenic non-protein coding RNA 240, humanhuman

TSL 1 (best)

Gene LINC00240, Length 927 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-203ENST00000606878 STEAP1BQ6NZ63 245 aa12.78□□□□□ -0.36
LINC00240-203ENST00000606878 TBC1D26Q86UD7 250 aa12.78□□□□□ -0.36
LINC00240-203ENST00000606878 TERB2Q8NHR7 220 aa12.78□□□□□ -0.36
LINC00240-203ENST00000606878 COMMD5Q9GZQ3 224 aa12.78□□□□□ -0.36
LINC00240-203ENST00000606878 FAM212BQ9NTI7 297 aaPredicted RBP12.78□□□□□ -0.36
LINC00240-203ENST00000606878 TMEM140Q9NV12 185 aa12.78□□□□□ -0.36
LINC00240-203ENST00000606878 RSL24D1Q9UHA3 163 aaKnown RBP12.78□□□□□ -0.36
LINC00240-203ENST00000606878 ZNF257Q9Y2Q1 563 aa12.78□□□□□ -0.36
LINC00240-203ENST00000606878 BOLA1Q9Y3E2 137 aa12.78□□□□□ -0.36
LINC00240-203ENST00000606878 TGP01266 2768 aa12.77□□□□□ -0.36
LINC00240-203ENST00000606878 TRAV3A0A0B4J244 114 aa12.77□□□□□ -0.37
LINC00240-203ENST00000606878 ANKRD34BA5PLL1 514 aa12.77□□□□□ -0.37
LINC00240-203ENST00000606878 FABP12A6NFH5 140 aa12.77□□□□□ -0.37
LINC00240-203ENST00000606878 TEX22C9J3V5 150 aa12.77□□□□□ -0.37
LINC00240-203ENST00000606878 E7EUB6 86 aa12.77□□□□□ -0.37
LINC00240-203ENST00000606878 DHFRP00374 187 aa12.77□□□□□ -0.37
LINC00240-203ENST00000606878 KRASP01116 189 aa12.77□□□□□ -0.37
LINC00240-203ENST00000606878 PRH1P02810 166 aa12.77□□□□□ -0.37
LINC00240-203ENST00000606878 ZP3P21754 424 aa12.77□□□□□ -0.37
LINC00240-203ENST00000606878 TNFSF8P32971 234 aa12.77□□□□□ -0.37
LINC00240-203ENST00000606878 ZNF585BQ52M93 769 aa12.77□□□□□ -0.37
LINC00240-203ENST00000606878 ZNF343Q6P1L6 599 aa12.77□□□□□ -0.37
LINC00240-203ENST00000606878 CADM3Q8N126 398 aa12.77□□□□□ -0.37
LINC00240-203ENST00000606878 NECAP1Q8NC96 275 aa12.77□□□□□ -0.37
LINC00240-203ENST00000606878 SMIM4Q8WVI0 70 aa12.77□□□□□ -0.37
LINC00240-203ENST00000606878 ZNF486Q96H40 463 aaPredicted RBP12.77□□□□□ -0.37
LINC00240-203ENST00000606878 NXF2Q9GZY0 626 aaKnown RBP12.77□□□□□ -0.37
LINC00240-203ENST00000606878 PEF1Q9UBV8 284 aaKnown RBP12.77□□□□□ -0.37
LINC00240-203ENST00000606878 TRBV9A0A0B4J1U6 114 aa12.76□□□□□ -0.37
LINC00240-203ENST00000606878 FAM223BA6NKX1 122 aa12.76□□□□□ -0.37
LINC00240-203ENST00000606878 MARCH11A6NNE9 402 aa12.76□□□□□ -0.37
LINC00240-203ENST00000606878 NPIPB5A8MRT5 1133 aa12.76□□□□□ -0.37
LINC00240-203ENST00000606878 SNAPC5O75971 98 aa12.76□□□□□ -0.37
LINC00240-203ENST00000606878 FGF2P09038 288 aa12.76□□□□□ -0.37
LINC00240-203ENST00000606878 PSMB6P28072 239 aa12.76□□□□□ -0.37
LINC00240-203ENST00000606878 OR2B8PP59922 312 aa12.76□□□□□ -0.37
LINC00240-203ENST00000606878 MEF2DQ14814 521 aa12.76□□□□□ -0.37
LINC00240-203ENST00000606878 DEFB121Q5J5C9 76 aa12.76□□□□□ -0.37
LINC00240-203ENST00000606878 ZNF429Q86V71 674 aa12.76□□□□□ -0.37
LINC00240-203ENST00000606878 LHFPL1Q86WI0 220 aa12.76□□□□□ -0.37
LINC00240-203ENST00000606878 FAM223AQ8IWN6 122 aa12.76□□□□□ -0.37
LINC00240-203ENST00000606878 ZFAND1Q8TCF1 268 aa12.76□□□□□ -0.37
LINC00240-203ENST00000606878 AKIP1Q9NQ31 210 aa12.76□□□□□ -0.37
LINC00240-203ENST00000606878 DISC1C4P0D8 188 aa12.75□□□□□ -0.37
LINC00240-203ENST00000606878 CRYGCP07315 174 aa12.75□□□□□ -0.37
LINC00240-203ENST00000606878 DEFA4P12838 97 aa12.75□□□□□ -0.37
LINC00240-203ENST00000606878 MYOD1P15172 320 aa12.75□□□□□ -0.37
LINC00240-203ENST00000606878 G6PCP35575 357 aa12.75□□□□□ -0.37
LINC00240-203ENST00000606878 ZNF45Q02386 682 aa12.75□□□□□ -0.37
LINC00240-203ENST00000606878 TATDN3Q17R31 274 aa12.75□□□□□ -0.37
LINC00240-203ENST00000606878 SCGB2B2Q4G0G5 96 aa12.75□□□□□ -0.37
LINC00240-203ENST00000606878 OR4D10Q8NGI6 311 aa12.75□□□□□ -0.37
LINC00240-203ENST00000606878 SRSF8Q9BRL6 282 aaKnown RBP12.75□□□□□ -0.37
LINC00240-203ENST00000606878 TEX50A0A1B0GTY4 177 aa12.74□□□□□ -0.37
LINC00240-203ENST00000606878 A0A1B0GW64 132 aa12.74□□□□□ -0.37
LINC00240-203ENST00000606878 WI2-2373I1.2A0A1W2PRP0 233 aa12.74□□□□□ -0.37
LINC00240-203ENST00000606878 ZNF701M0R085 212 aaPredicted RBP12.74□□□□□ -0.37
LINC00240-203ENST00000606878 GSTZ1O43708 216 aaPredicted RBP12.74□□□□□ -0.37
LINC00240-203ENST00000606878 RBMXL2O75526 392 aaKnown RBP12.74□□□□□ -0.37
LINC00240-203ENST00000606878 OR2J3O76001 311 aa12.74□□□□□ -0.37
LINC00240-203ENST00000606878 SERPINE2P07093 398 aa12.74□□□□□ -0.37
LINC00240-203ENST00000606878 TRAPPC2P0DI81 140 aa12.74□□□□□ -0.37
LINC00240-203ENST00000606878 TRAPPC2BP0DI82 140 aa12.74□□□□□ -0.37
LINC00240-203ENST00000606878 AREGP15514 252 aa12.74□□□□□ -0.37
LINC00240-203ENST00000606878 HIST1H1BP16401 226 aaKnown RBP12.74□□□□□ -0.37
LINC00240-203ENST00000606878 ECI1P42126 302 aa12.74□□□□□ -0.37
LINC00240-203ENST00000606878 PIGPP57054 158 aa12.74□□□□□ -0.37
LINC00240-203ENST00000606878 RND3P61587 244 aa12.74□□□□□ -0.37
LINC00240-203ENST00000606878 DEFA5Q01523 94 aa12.74□□□□□ -0.37
LINC00240-203ENST00000606878 FAM209BQ5JX69 171 aa12.74□□□□□ -0.37
LINC00240-203ENST00000606878 OR1L8Q8NGR8 309 aa12.74□□□□□ -0.37
LINC00240-203ENST00000606878 OR4C12Q96R67 309 aa12.74□□□□□ -0.37
LINC00240-203ENST00000606878 SOSTQ9BQB4 213 aa12.74□□□□□ -0.37
LINC00240-203ENST00000606878 ELOVL1Q9BW60 279 aa12.74□□□□□ -0.37
LINC00240-203ENST00000606878 FKBP11Q9NYL4 201 aa12.74□□□□□ -0.37
LINC00240-203ENST00000606878 COPZ2Q9P299 210 aa12.74□□□□□ -0.37
LINC00240-203ENST00000606878 FBXL7Q9UJT9 491 aa12.74□□□□□ -0.37
LINC00240-203ENST00000606878 K7EIL1 84 aa12.73□□□□□ -0.37
LINC00240-203ENST00000606878 SAP30O75446 220 aa12.73□□□□□ -0.37
LINC00240-203ENST00000606878 AKAIN1P0CW23 69 aa12.73□□□□□ -0.37
LINC00240-203ENST00000606878 CTRB1P17538 263 aa12.73□□□□□ -0.37
LINC00240-203ENST00000606878 PI3P19957 117 aa12.73□□□□□ -0.37
LINC00240-203ENST00000606878 PTBP1P26599 531 aaKnown RBP eCLIP12.73□□□□□ -0.37
LINC00240-203ENST00000606878 S100A5P33763 92 aa12.73□□□□□ -0.37
LINC00240-203ENST00000606878 KLF5Q13887 457 aaPredicted RBP12.73□□□□□ -0.37
LINC00240-203ENST00000606878 C15orf32Q32M92 178 aa12.73□□□□□ -0.37
LINC00240-203ENST00000606878 CTRB2Q6GPI1 263 aa12.73□□□□□ -0.37
LINC00240-203ENST00000606878 THOC7Q6I9Y2 204 aaKnown RBP12.73□□□□□ -0.37
LINC00240-203ENST00000606878 ACSM6Q6P461 480 aa12.73□□□□□ -0.37
LINC00240-203ENST00000606878 HSD17B13Q7Z5P4 300 aaPredicted RBP12.73□□□□□ -0.37
LINC00240-203ENST00000606878 CCDC71LQ8N9Z2 235 aa12.73□□□□□ -0.37
LINC00240-203ENST00000606878 TSC22D3Q99576 134 aa12.73□□□□□ -0.37
LINC00240-203ENST00000606878 QTRT1Q9BXR0 403 aaKnown RBP12.73□□□□□ -0.37
LINC00240-203ENST00000606878 PRNDQ9UKY0 176 aa12.73□□□□□ -0.37
LINC00240-203ENST00000606878 SORL1Q92673 2214 aa12.72□□□□□ -0.37
LINC00240-203ENST00000606878 CGB1A6NKQ9 187 aa12.72□□□□□ -0.37
LINC00240-203ENST00000606878 PPP5CP53041 499 aa12.72□□□□□ -0.37
LINC00240-203ENST00000606878 EXOSC2Q13868 293 aaKnown RBP12.72□□□□□ -0.37
LINC00240-203ENST00000606878 H2BFWTQ7Z2G1 175 aa12.72□□□□□ -0.37
LINC00240-203ENST00000606878 THAP7Q9BT49 309 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms