RNA–Protein interactions for RNA: ENST00000601393.1

SNRPA-210, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-210ENST00000601393 HLA-GP17693 338 aa12.94□□□□□ -0.34
SNRPA-210ENST00000601393 PTBP1P26599 531 aaKnown RBP eCLIP12.94□□□□□ -0.34
SNRPA-210ENST00000601393 LPAR6P43657 344 aa12.94□□□□□ -0.34
SNRPA-210ENST00000601393 KRTAP10-11P60412 298 aa12.94□□□□□ -0.34
SNRPA-210ENST00000601393 DEFA5Q01523 94 aa12.94□□□□□ -0.34
SNRPA-210ENST00000601393 TBC1D26Q86UD7 250 aa12.94□□□□□ -0.34
SNRPA-210ENST00000601393 ZNF486Q96H40 463 aaPredicted RBP12.94□□□□□ -0.34
SNRPA-210ENST00000601393 GPR61Q9BZJ8 451 aa12.94□□□□□ -0.34
SNRPA-210ENST00000601393 AURKAIP1Q9NWT8 199 aaPredicted RBP12.94□□□□□ -0.34
SNRPA-210ENST00000601393 ANKRD20A5PA0PJZ0 165 aa12.93□□□□□ -0.34
SNRPA-210ENST00000601393 NPIPB5A8MRT5 1133 aa12.93□□□□□ -0.34
SNRPA-210ENST00000601393 LINC01619G3V211 115 aa12.93□□□□□ -0.34
SNRPA-210ENST00000601393 IGKV1-39P01597 117 aa12.93□□□□□ -0.34
SNRPA-210ENST00000601393 IGKV1D-39P04432 117 aa12.93□□□□□ -0.34
SNRPA-210ENST00000601393 CRYGCP07315 174 aa12.93□□□□□ -0.34
SNRPA-210ENST00000601393 S100A5P33763 92 aa12.93□□□□□ -0.34
SNRPA-210ENST00000601393 RAB25P57735 213 aa12.93□□□□□ -0.34
SNRPA-210ENST00000601393 OR2B8PP59922 312 aa12.93□□□□□ -0.34
SNRPA-210ENST00000601393 FAAP20Q6NZ36 180 aa12.93□□□□□ -0.34
SNRPA-210ENST00000601393 OR4C16Q8NGL9 310 aa12.93□□□□□ -0.34
SNRPA-210ENST00000601393 TERB2Q8NHR7 220 aa12.93□□□□□ -0.34
SNRPA-210ENST00000601393 ZNF355PQ9NSJ1 428 aa12.93□□□□□ -0.34
SNRPA-210ENST00000601393 COA4Q9NYJ1 87 aa12.93□□□□□ -0.34
SNRPA-210ENST00000601393 V9GYH0 126 aa12.93□□□□□ -0.34
SNRPA-210ENST00000601393 A0A0G2JLM5 398 aa12.92□□□□□ -0.34
SNRPA-210ENST00000601393 MPPED1O15442 326 aa12.92□□□□□ -0.34
SNRPA-210ENST00000601393 HSPB1P04792 205 aaKnown RBP12.92□□□□□ -0.34
SNRPA-210ENST00000601393 AREGP15514 252 aa12.92□□□□□ -0.34
SNRPA-210ENST00000601393 HOXD3P31249 432 aaPredicted RBP12.92□□□□□ -0.34
SNRPA-210ENST00000601393 SLURP1P55000 103 aa12.92□□□□□ -0.34
SNRPA-210ENST00000601393 MEF2DQ14814 521 aa12.92□□□□□ -0.34
SNRPA-210ENST00000601393 ZNF343Q6P1L6 599 aa12.92□□□□□ -0.34
SNRPA-210ENST00000601393 REC114Q7Z4M0 266 aa12.92□□□□□ -0.34
SNRPA-210ENST00000601393 DMBX1Q8NFW5 382 aa12.92□□□□□ -0.34
SNRPA-210ENST00000601393 DCUN1D4Q92564 292 aa12.92□□□□□ -0.34
SNRPA-210ENST00000601393 DLX4Q92988 240 aaPredicted RBP12.92□□□□□ -0.34
SNRPA-210ENST00000601393 USMG5Q96IX5 58 aa12.92□□□□□ -0.34
SNRPA-210ENST00000601393 HRASLSQ9HDD0 168 aa12.92□□□□□ -0.34
SNRPA-210ENST00000601393 PTTG2Q9NZH5 202 aa12.92□□□□□ -0.34
SNRPA-210ENST00000601393 ZNF257Q9Y2Q1 563 aa12.92□□□□□ -0.34
SNRPA-210ENST00000601393 C13orf42A0A1B0GVH6 325 aa12.91□□□□□ -0.34
SNRPA-210ENST00000601393 FABP12A6NFH5 140 aa12.91□□□□□ -0.34
SNRPA-210ENST00000601393 PRH1P02810 166 aa12.91□□□□□ -0.34
SNRPA-210ENST00000601393 RPA2P15927 270 aa12.91□□□□□ -0.34
SNRPA-210ENST00000601393 CTRB1P17538 263 aa12.91□□□□□ -0.34
SNRPA-210ENST00000601393 PI3P19957 117 aa12.91□□□□□ -0.34
SNRPA-210ENST00000601393 PPP5CP53041 499 aa12.91□□□□□ -0.34
SNRPA-210ENST00000601393 ZNF79Q15937 498 aa12.91□□□□□ -0.34
SNRPA-210ENST00000601393 CTRB2Q6GPI1 263 aa12.91□□□□□ -0.34
SNRPA-210ENST00000601393 C19orf35Q6ZS72 473 aa12.91□□□□□ -0.34
SNRPA-210ENST00000601393 LINC00299Q6ZSB3 139 aa12.91□□□□□ -0.34
SNRPA-210ENST00000601393 CCDC190Q86UF4 302 aa12.91□□□□□ -0.34
SNRPA-210ENST00000601393 SLC25A42Q86VD7 318 aa12.91□□□□□ -0.34
SNRPA-210ENST00000601393 OR6Q1Q8NGQ2 317 aa12.91□□□□□ -0.34
SNRPA-210ENST00000601393 DPF1Q92782 380 aa12.91□□□□□ -0.34
SNRPA-210ENST00000601393 TRIM63Q969Q1 353 aa12.91□□□□□ -0.34
SNRPA-210ENST00000601393 SEC22AQ96IW7 307 aa12.91□□□□□ -0.34
SNRPA-210ENST00000601393 FANCD2OSQ96PS1 177 aa12.91□□□□□ -0.34
SNRPA-210ENST00000601393 FYTTD1Q96QD9 318 aaKnown RBP12.91□□□□□ -0.34
SNRPA-210ENST00000601393 AKIP1Q9NQ31 210 aa12.91□□□□□ -0.34
SNRPA-210ENST00000601393 IGLC7A0M8Q6 106 aa12.9□□□□□ -0.34
SNRPA-210ENST00000601393 FAM223BA6NKX1 122 aa12.9□□□□□ -0.34
SNRPA-210ENST00000601393 KRASP01116 189 aa12.9□□□□□ -0.34
SNRPA-210ENST00000601393 AKAIN1P0CW23 69 aa12.9□□□□□ -0.34
SNRPA-210ENST00000601393 PGAM2P15259 253 aa12.9□□□□□ -0.34
SNRPA-210ENST00000601393 PSMB6P28072 239 aa12.9□□□□□ -0.34
SNRPA-210ENST00000601393 S100GP29377 79 aa12.9□□□□□ -0.34
SNRPA-210ENST00000601393 G6PCP35575 357 aa12.9□□□□□ -0.34
SNRPA-210ENST00000601393 PIGPP57054 158 aa12.9□□□□□ -0.34
SNRPA-210ENST00000601393 ERVK-16P61578 105 aa12.9□□□□□ -0.34
SNRPA-210ENST00000601393 RHOGP84095 191 aa12.9□□□□□ -0.34
SNRPA-210ENST00000601393 C9orf66Q5T8R8 295 aa12.9□□□□□ -0.34
SNRPA-210ENST00000601393 FAM223AQ8IWN6 122 aa12.9□□□□□ -0.34
SNRPA-210ENST00000601393 OR13C8Q8NGS7 320 aa12.9□□□□□ -0.34
SNRPA-210ENST00000601393 MARCH1Q8TCQ1 289 aa12.9□□□□□ -0.34
SNRPA-210ENST00000601393 SRSF8Q9BRL6 282 aaKnown RBP12.9□□□□□ -0.34
SNRPA-210ENST00000601393 SLC2A8Q9NY64 477 aa12.9□□□□□ -0.34
SNRPA-210ENST00000601393 SEC14L6B5MCN3 397 aa12.89□□□□□ -0.35
SNRPA-210ENST00000601393 H0Y980 276 aa12.89□□□□□ -0.35
SNRPA-210ENST00000601393 OVOL1O14753 267 aa12.89□□□□□ -0.35
SNRPA-210ENST00000601393 TRBV12-3P01733 135 aa12.89□□□□□ -0.35
SNRPA-210ENST00000601393 CTSDP07339 412 aaPredicted RBP12.89□□□□□ -0.35
SNRPA-210ENST00000601393 SCGB2B2Q4G0G5 96 aa12.89□□□□□ -0.35
SNRPA-210ENST00000601393 NECAP1Q8NC96 275 aa12.89□□□□□ -0.35
SNRPA-210ENST00000601393 TP53RKQ96S44 253 aa12.89□□□□□ -0.35
SNRPA-210ENST00000601393 TEX50A0A1B0GTY4 177 aa12.88□□□□□ -0.35
SNRPA-210ENST00000601393 DBX1A6NMT0 343 aa12.88□□□□□ -0.35
SNRPA-210ENST00000601393 DISC1C4P0D8 188 aa12.88□□□□□ -0.35
SNRPA-210ENST00000601393 P0C879 139 aa12.88□□□□□ -0.35
SNRPA-210ENST00000601393 ETV6P41212 452 aa12.88□□□□□ -0.35
SNRPA-210ENST00000601393 ECI1P42126 302 aa12.88□□□□□ -0.35
SNRPA-210ENST00000601393 SURF2Q15527 256 aaPredicted RBP12.88□□□□□ -0.35
SNRPA-210ENST00000601393 ZFAND1Q8TCF1 268 aa12.88□□□□□ -0.35
SNRPA-210ENST00000601393 RTBDNQ9BSG5 229 aaPredicted RBP12.88□□□□□ -0.35
SNRPA-210ENST00000601393 QTRT1Q9BXR0 403 aaKnown RBP12.88□□□□□ -0.35
SNRPA-210ENST00000601393 COMMD5Q9GZQ3 224 aa12.88□□□□□ -0.35
SNRPA-210ENST00000601393 RANGRFQ9HD47 186 aaPredicted RBP12.88□□□□□ -0.35
SNRPA-210ENST00000601393 NDUFA4L2Q9NRX3 87 aa12.88□□□□□ -0.35
SNRPA-210ENST00000601393 TMEM14BQ9NUH8 114 aa12.88□□□□□ -0.35
SNRPA-210ENST00000601393 DMRT1Q9Y5R6 373 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms