RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 DLX4Q92988 240 aaPredicted RBP6.75□□□□□ -1.33
SSBP4-208ENST00000600628 ZNF486Q96H40 463 aaPredicted RBP6.75□□□□□ -1.33
SSBP4-208ENST00000600628 SEC22AQ96IW7 307 aa6.75□□□□□ -1.33
SSBP4-208ENST00000600628 USMG5Q96IX5 58 aa6.75□□□□□ -1.33
SSBP4-208ENST00000600628 SRSF8Q9BRL6 282 aaKnown RBP6.75□□□□□ -1.33
SSBP4-208ENST00000600628 SLC2A8Q9NY64 477 aa6.75□□□□□ -1.33
SSBP4-208ENST00000600628 ZNF257Q9Y2Q1 563 aa6.75□□□□□ -1.33
SSBP4-208ENST00000600628 A0A0G2JLM5 398 aa6.74□□□□□ -1.33
SSBP4-208ENST00000600628 WI2-2373I1.2A0A1W2PRP0 233 aa6.74□□□□□ -1.33
SSBP4-208ENST00000600628 HMX3A6NHT5 357 aa6.74□□□□□ -1.33
SSBP4-208ENST00000600628 FAM223BA6NKX1 122 aa6.74□□□□□ -1.33
SSBP4-208ENST00000600628 LINC01619G3V211 115 aa6.74□□□□□ -1.33
SSBP4-208ENST00000600628 HLA-GP17693 338 aa6.74□□□□□ -1.33
SSBP4-208ENST00000600628 CD40LGP29965 261 aa6.74□□□□□ -1.33
SSBP4-208ENST00000600628 ETV6P41212 452 aa6.74□□□□□ -1.33
SSBP4-208ENST00000600628 RPL27AP46776 148 aaKnown RBP6.74□□□□□ -1.33
SSBP4-208ENST00000600628 INSL3P51460 131 aa6.74□□□□□ -1.33
SSBP4-208ENST00000600628 TPPP2P59282 170 aa6.74□□□□□ -1.33
SSBP4-208ENST00000600628 TAS2R19P59542 299 aa6.74□□□□□ -1.33
SSBP4-208ENST00000600628 KLF5Q13887 457 aaPredicted RBP6.74□□□□□ -1.33
SSBP4-208ENST00000600628 ZNF79Q15937 498 aa6.74□□□□□ -1.33
SSBP4-208ENST00000600628 AARDQ4LEZ3 155 aa6.74□□□□□ -1.33
SSBP4-208ENST00000600628 RNASE10Q5GAN6 216 aaKnown RBP6.74□□□□□ -1.33
SSBP4-208ENST00000600628 STEAP1BQ6NZ63 245 aa6.74□□□□□ -1.33
SSBP4-208ENST00000600628 ACSM6Q6P461 480 aa6.74□□□□□ -1.33
SSBP4-208ENST00000600628 IL34Q6ZMJ4 242 aa6.74□□□□□ -1.33
SSBP4-208ENST00000600628 CCDC190Q86UF4 302 aa6.74□□□□□ -1.33
SSBP4-208ENST00000600628 FAM223AQ8IWN6 122 aa6.74□□□□□ -1.33
SSBP4-208ENST00000600628 DCUN1D4Q92564 292 aa6.74□□□□□ -1.33
SSBP4-208ENST00000600628 TRIM63Q969Q1 353 aa6.74□□□□□ -1.33
SSBP4-208ENST00000600628 DIRAS2Q96HU8 199 aa6.74□□□□□ -1.33
SSBP4-208ENST00000600628 MS4A10Q96PG2 267 aa6.74□□□□□ -1.33
SSBP4-208ENST00000600628 OR5B12Q96R08 314 aa6.74□□□□□ -1.33
SSBP4-208ENST00000600628 TSC22D3Q99576 134 aa6.74□□□□□ -1.33
SSBP4-208ENST00000600628 DCUN1D5Q9BTE7 237 aa6.74□□□□□ -1.33
SSBP4-208ENST00000600628 AKIP1Q9NQ31 210 aa6.74□□□□□ -1.33
SSBP4-208ENST00000600628 NDUFA4L2Q9NRX3 87 aa6.74□□□□□ -1.33
SSBP4-208ENST00000600628 TMEM14BQ9NUH8 114 aa6.74□□□□□ -1.33
SSBP4-208ENST00000600628 TMEM140Q9NV12 185 aa6.74□□□□□ -1.33
SSBP4-208ENST00000600628 ZMAT5Q9UDW3 170 aaKnown RBP6.74□□□□□ -1.33
SSBP4-208ENST00000600628 V9GYH0 126 aa6.74□□□□□ -1.33
SSBP4-208ENST00000600628 TENM3Q9P273 2699 aa6.73□□□□□ -1.33
SSBP4-208ENST00000600628 IGLV11-55A0A075B6I3 123 aa6.73□□□□□ -1.33
SSBP4-208ENST00000600628 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.73□□□□□ -1.33
SSBP4-208ENST00000600628 DBX1A6NMT0 343 aa6.73□□□□□ -1.33
SSBP4-208ENST00000600628 SEC14L6B5MCN3 397 aa6.73□□□□□ -1.33
SSBP4-208ENST00000600628 MPPED1O15442 326 aa6.73□□□□□ -1.33
SSBP4-208ENST00000600628 RGS5O15539 181 aa6.73□□□□□ -1.33
SSBP4-208ENST00000600628 MYOD1P15172 320 aa6.73□□□□□ -1.33
SSBP4-208ENST00000600628 AREGP15514 252 aa6.73□□□□□ -1.33
SSBP4-208ENST00000600628 PSMB6P28072 239 aa6.73□□□□□ -1.33
SSBP4-208ENST00000600628 LPAR6P43657 344 aa6.73□□□□□ -1.33
SSBP4-208ENST00000600628 MECP2P51608 486 aaKnown RBP6.73□□□□□ -1.33
SSBP4-208ENST00000600628 TSPAN5P62079 268 aa6.73□□□□□ -1.33
SSBP4-208ENST00000600628 SURF2Q15527 256 aaPredicted RBP6.73□□□□□ -1.33
SSBP4-208ENST00000600628 DEFB121Q5J5C9 76 aa6.73□□□□□ -1.33
SSBP4-208ENST00000600628 C9orf66Q5T8R8 295 aa6.73□□□□□ -1.33
SSBP4-208ENST00000600628 THOC7Q6I9Y2 204 aaKnown RBP6.73□□□□□ -1.33
SSBP4-208ENST00000600628 SSX9Q7RTT3 188 aa6.73□□□□□ -1.33
SSBP4-208ENST00000600628 TBC1D26Q86UD7 250 aa6.73□□□□□ -1.33
SSBP4-208ENST00000600628 SLC25A42Q86VD7 318 aa6.73□□□□□ -1.33
SSBP4-208ENST00000600628 NECAP1Q8NC96 275 aa6.73□□□□□ -1.33
SSBP4-208ENST00000600628 OR4C16Q8NGL9 310 aa6.73□□□□□ -1.33
SSBP4-208ENST00000600628 OR13C8Q8NGS7 320 aa6.73□□□□□ -1.33
SSBP4-208ENST00000600628 MCFD2Q8NI22 146 aa6.73□□□□□ -1.33
SSBP4-208ENST00000600628 FYTTD1Q96QD9 318 aaKnown RBP6.73□□□□□ -1.33
SSBP4-208ENST00000600628 RTBDNQ9BSG5 229 aaPredicted RBP6.73□□□□□ -1.33
SSBP4-208ENST00000600628 RANGRFQ9HD47 186 aaPredicted RBP6.73□□□□□ -1.33
SSBP4-208ENST00000600628 RSL24D1Q9UHA3 163 aaKnown RBP6.73□□□□□ -1.33
SSBP4-208ENST00000600628 TEX50A0A1B0GTY4 177 aa6.72□□□□□ -1.33
SSBP4-208ENST00000600628 INS-IGF2F8WCM5 200 aa6.72□□□□□ -1.33
SSBP4-208ENST00000600628 H0Y980 276 aa6.72□□□□□ -1.33
SSBP4-208ENST00000600628 BMPR1BO00238 502 aa6.72□□□□□ -1.33
SSBP4-208ENST00000600628 OVOL1O14753 267 aa6.72□□□□□ -1.33
SSBP4-208ENST00000600628 RAB3DO95716 219 aa6.72□□□□□ -1.33
SSBP4-208ENST00000600628 TRBV12-3P01733 135 aa6.72□□□□□ -1.33
SSBP4-208ENST00000600628 IGHV3-11P01762 117 aa6.72□□□□□ -1.33
SSBP4-208ENST00000600628 APELAP0DMC3 54 aa6.72□□□□□ -1.33
SSBP4-208ENST00000600628 RPA2P15927 270 aa6.72□□□□□ -1.33
SSBP4-208ENST00000600628 UCP1P25874 307 aa6.72□□□□□ -1.33
SSBP4-208ENST00000600628 SLURP1P55000 103 aa6.72□□□□□ -1.33
SSBP4-208ENST00000600628 RHOGP84095 191 aa6.72□□□□□ -1.33
SSBP4-208ENST00000600628 WT1-ASQ06250 92 aa6.72□□□□□ -1.33
SSBP4-208ENST00000600628 MEF2DQ14814 521 aa6.72□□□□□ -1.33
SSBP4-208ENST00000600628 PHLDA2Q53GA4 152 aa6.72□□□□□ -1.33
SSBP4-208ENST00000600628 PVRIGQ6DKI7 326 aa6.72□□□□□ -1.33
SSBP4-208ENST00000600628 C19orf35Q6ZS72 473 aa6.72□□□□□ -1.33
SSBP4-208ENST00000600628 DEDD2Q8WXF8 326 aa6.72□□□□□ -1.33
SSBP4-208ENST00000600628 ZNF414Q96IQ9 312 aa6.72□□□□□ -1.33
SSBP4-208ENST00000600628 CCDC140Q96MF4 163 aa6.72□□□□□ -1.33
SSBP4-208ENST00000600628 TP53RKQ96S44 253 aa6.72□□□□□ -1.33
SSBP4-208ENST00000600628 QTRT1Q9BXR0 403 aaKnown RBP6.72□□□□□ -1.33
SSBP4-208ENST00000600628 C6orf62Q9GZU0 229 aaPredicted RBP6.72□□□□□ -1.33
SSBP4-208ENST00000600628 C5orf66Q9H5L9 145 aa6.72□□□□□ -1.33
SSBP4-208ENST00000600628 ZNF355PQ9NSJ1 428 aa6.72□□□□□ -1.33
SSBP4-208ENST00000600628 COA4Q9NYJ1 87 aa6.72□□□□□ -1.33
SSBP4-208ENST00000600628 SIGLEC8Q9NYZ4 499 aa6.72□□□□□ -1.33
SSBP4-208ENST00000600628 GPR132Q9UNW8 380 aa6.72□□□□□ -1.33
SSBP4-208ENST00000600628 LSM4Q9Y4Z0 139 aaKnown RBP6.72□□□□□ -1.33
SSBP4-208ENST00000600628 C13orf42A0A1B0GVH6 325 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms