RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 IGKV1-13P0DP09 117 aa11.57□□□□□ -0.56
LIG1-214ENST00000597146 EDN2P20800 178 aa11.57□□□□□ -0.56
LIG1-214ENST00000597146 KIR2DS2P43631 304 aa11.57□□□□□ -0.56
LIG1-214ENST00000597146 TAS2R20P59543 309 aa11.57□□□□□ -0.56
LIG1-214ENST00000597146 PRSS8Q16651 343 aa11.57□□□□□ -0.56
LIG1-214ENST00000597146 RPEL1Q2QD12 228 aa11.57□□□□□ -0.56
LIG1-214ENST00000597146 GPR107Q5VW38 600 aa11.57□□□□□ -0.56
LIG1-214ENST00000597146 IDO2Q6ZQW0 420 aa11.57□□□□□ -0.56
LIG1-214ENST00000597146 MMD2Q8IY49 270 aa11.57□□□□□ -0.56
LIG1-214ENST00000597146 ZBTB34Q8NCN2 500 aa11.57□□□□□ -0.56
LIG1-214ENST00000597146 OR5H2Q8NGV7 314 aa11.57□□□□□ -0.56
LIG1-214ENST00000597146 VSTM2AQ8TAG5 236 aa11.57□□□□□ -0.56
LIG1-214ENST00000597146 AP3S1Q92572 193 aa11.57□□□□□ -0.56
LIG1-214ENST00000597146 EHFQ9NZC4 300 aa11.57□□□□□ -0.56
LIG1-214ENST00000597146 PEF1Q9UBV8 284 aaKnown RBP11.57□□□□□ -0.56
LIG1-214ENST00000597146 OR2A4O95047 310 aa11.56□□□□□ -0.56
LIG1-214ENST00000597146 NDUFB8O95169 186 aa11.56□□□□□ -0.56
LIG1-214ENST00000597146 PMP2P02689 132 aa11.56□□□□□ -0.56
LIG1-214ENST00000597146 CRYGBP07316 175 aa11.56□□□□□ -0.56
LIG1-214ENST00000597146 TAS2R46P59540 309 aa11.56□□□□□ -0.56
LIG1-214ENST00000597146 TSPAN5P62079 268 aa11.56□□□□□ -0.56
LIG1-214ENST00000597146 RPL30P62888 115 aaKnown RBP11.56□□□□□ -0.56
LIG1-214ENST00000597146 CATR1Q13166 79 aa11.56□□□□□ -0.56
LIG1-214ENST00000597146 GPR141Q7Z602 305 aa11.56□□□□□ -0.56
LIG1-214ENST00000597146 GIMAP1Q8WWP7 306 aa11.56□□□□□ -0.56
LIG1-214ENST00000597146 WDR89Q96FK6 387 aaPredicted RBP11.56□□□□□ -0.56
LIG1-214ENST00000597146 SPIN2AQ99865 258 aa11.56□□□□□ -0.56
LIG1-214ENST00000597146 SPIN2BQ9BPZ2 258 aa11.56□□□□□ -0.56
LIG1-214ENST00000597146 H3BUA1 57 aa11.55□□□□□ -0.56
LIG1-214ENST00000597146 APOA1P02647 267 aa11.55□□□□□ -0.56
LIG1-214ENST00000597146 S100GP29377 79 aa11.55□□□□□ -0.56
LIG1-214ENST00000597146 RFX2P48378 723 aa11.55□□□□□ -0.56
LIG1-214ENST00000597146 TATDN3Q17R31 274 aa11.55□□□□□ -0.56
LIG1-214ENST00000597146 TMEM17Q86X19 198 aa11.55□□□□□ -0.56
LIG1-214ENST00000597146 WFDC3Q8IUB2 231 aa11.55□□□□□ -0.56
LIG1-214ENST00000597146 SNX29P2Q8IUI4 249 aa11.55□□□□□ -0.56
LIG1-214ENST00000597146 SPAG16Q8N0X2 631 aa11.55□□□□□ -0.56
LIG1-214ENST00000597146 OR6F1Q8NGZ6 308 aa11.55□□□□□ -0.56
LIG1-214ENST00000597146 DYNLRB2Q8TF09 96 aa11.55□□□□□ -0.56
LIG1-214ENST00000597146 CMTM3Q96MX0 182 aa11.55□□□□□ -0.56
LIG1-214ENST00000597146 OR2A7Q96R45 310 aa11.55□□□□□ -0.56
LIG1-214ENST00000597146 MRPS26Q9BYN8 205 aaKnown RBP11.55□□□□□ -0.56
LIG1-214ENST00000597146 HRASLSQ9HDD0 168 aa11.55□□□□□ -0.56
LIG1-214ENST00000597146 PLA2G2EQ9NZK7 142 aa11.55□□□□□ -0.56
LIG1-214ENST00000597146 PEMTQ9UBM1 199 aa11.55□□□□□ -0.56
LIG1-214ENST00000597146 LOC102724200A0A096LPH7 203 aaPredicted RBP11.54□□□□□ -0.56
LIG1-214ENST00000597146 SULT1C2O00338 296 aa11.54□□□□□ -0.56
LIG1-214ENST00000597146 HPGDSO60760 199 aa11.54□□□□□ -0.56
LIG1-214ENST00000597146 EIF4EP06730 217 aaKnown RBP11.54□□□□□ -0.56
LIG1-214ENST00000597146 SAA1P0DJI8 122 aaPredicted RBP11.54□□□□□ -0.56
LIG1-214ENST00000597146 DEFB135Q30KP9 77 aa11.54□□□□□ -0.56
LIG1-214ENST00000597146 AADACL3Q5VUY0 350 aa11.54□□□□□ -0.56
LIG1-214ENST00000597146 ZNF343Q6P1L6 599 aa11.54□□□□□ -0.56
LIG1-214ENST00000597146 LINC00336Q6ZUF6 198 aa11.54□□□□□ -0.56
LIG1-214ENST00000597146 SSX9Q7RTT3 188 aa11.54□□□□□ -0.56
LIG1-214ENST00000597146 SLC25A42Q86VD7 318 aa11.54□□□□□ -0.56
LIG1-214ENST00000597146 VKORC1L1Q8N0U8 176 aa11.54□□□□□ -0.56
LIG1-214ENST00000597146 SRSF12Q8WXF0 261 aaKnown RBP11.54□□□□□ -0.56
LIG1-214ENST00000597146 FYTTD1Q96QD9 318 aaKnown RBP11.54□□□□□ -0.56
LIG1-214ENST00000597146 GPHA2Q96T91 129 aa11.54□□□□□ -0.56
LIG1-214ENST00000597146 ZNF2Q9BSG1 426 aaPredicted RBP11.54□□□□□ -0.56
LIG1-214ENST00000597146 ZNF430Q9H8G1 570 aaPredicted RBP11.54□□□□□ -0.56
LIG1-214ENST00000597146 OR9G9P0C7N8 305 aa11.53□□□□□ -0.56
LIG1-214ENST00000597146 ZNF182P17025 639 aaPredicted RBP11.53□□□□□ -0.56
LIG1-214ENST00000597146 HLA-DMAP28067 261 aa11.53□□□□□ -0.56
LIG1-214ENST00000597146 MSMO1Q15800 293 aa11.53□□□□□ -0.56
LIG1-214ENST00000597146 DEFB114Q30KQ6 69 aa11.53□□□□□ -0.56
LIG1-214ENST00000597146 CMTM1Q8IZ96 169 aa11.53□□□□□ -0.56
LIG1-214ENST00000597146 CD300LFQ8TDQ1 290 aa11.53□□□□□ -0.56
LIG1-214ENST00000597146 SNAPC3Q92966 411 aa11.53□□□□□ -0.56
LIG1-214ENST00000597146 USMG5Q96IX5 58 aa11.53□□□□□ -0.56
LIG1-214ENST00000597146 ZC4H2Q9NQZ6 224 aa11.53□□□□□ -0.56
LIG1-214ENST00000597146 SPRY2O43597 315 aa11.52□□□□□ -0.57
LIG1-214ENST00000597146 RBMXL2O75526 392 aaKnown RBP11.52□□□□□ -0.57
LIG1-214ENST00000597146 IGLV2-14P01704 120 aa11.52□□□□□ -0.57
LIG1-214ENST00000597146 ATF4P18848 351 aaPredicted RBP11.52□□□□□ -0.57
LIG1-214ENST00000597146 ELK1P19419 428 aa11.52□□□□□ -0.57
LIG1-214ENST00000597146 BMI1P35226 326 aa11.52□□□□□ -0.57
LIG1-214ENST00000597146 ATP5G2Q06055 141 aa11.52□□□□□ -0.57
LIG1-214ENST00000597146 LPCAT3Q6P1A2 487 aa11.52□□□□□ -0.57
LIG1-214ENST00000597146 DHRS11Q6UWP2 260 aa11.52□□□□□ -0.57
LIG1-214ENST00000597146 DMBX1Q8NFW5 382 aa11.52□□□□□ -0.57
LIG1-214ENST00000597146 OR51H1Q8NH63 302 aa11.52□□□□□ -0.57
LIG1-214ENST00000597146 TINAGL1Q9GZM7 467 aaPredicted RBP11.52□□□□□ -0.57
LIG1-214ENST00000597146 SCPEP1Q9HB40 452 aa11.52□□□□□ -0.57
LIG1-214ENST00000597146 BMPR1BO00238 502 aa11.51□□□□□ -0.57
LIG1-214ENST00000597146 RGS5O15539 181 aa11.51□□□□□ -0.57
LIG1-214ENST00000597146 NOL3O60936 208 aaKnown RBP11.51□□□□□ -0.57
LIG1-214ENST00000597146 HPRT1P00492 218 aa11.51□□□□□ -0.57
LIG1-214ENST00000597146 MAS1LP35410 378 aa11.51□□□□□ -0.57
LIG1-214ENST00000597146 RPL27AP46776 148 aaKnown RBP11.51□□□□□ -0.57
LIG1-214ENST00000597146 ERVK-16P61578 105 aa11.51□□□□□ -0.57
LIG1-214ENST00000597146 SSBP2P81877 361 aaPredicted RBP11.51□□□□□ -0.57
LIG1-214ENST00000597146 SLC16A13Q7RTY0 426 aa11.51□□□□□ -0.57
LIG1-214ENST00000597146 NAA50Q9GZZ1 169 aaKnown RBP11.51□□□□□ -0.57
LIG1-214ENST00000597146 KBTBD11O94819 623 aa11.5□□□□□ -0.57
LIG1-214ENST00000597146 DHFRP00374 187 aa11.5□□□□□ -0.57
LIG1-214ENST00000597146 SMIM18P0DKX4 95 aa11.5□□□□□ -0.57
LIG1-214ENST00000597146 DEFA4P12838 97 aa11.5□□□□□ -0.57
LIG1-214ENST00000597146 HRH1P35367 487 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms