RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 OR2C3Q8N628 320 aa10.24□□□□□ -0.77
SCAF1-202ENST00000595242 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.24□□□□□ -0.77
SCAF1-202ENST00000595242 PCNPQ8WW12 178 aaKnown RBP10.24□□□□□ -0.77
SCAF1-202ENST00000595242 RCC1LQ96I51 464 aaKnown RBP10.24□□□□□ -0.77
SCAF1-202ENST00000595242 CITED4Q96RK1 184 aa10.24□□□□□ -0.77
SCAF1-202ENST00000595242 SDHAF2Q9NX18 166 aa10.24□□□□□ -0.77
SCAF1-202ENST00000595242 GFOD1Q9NXC2 390 aa10.24□□□□□ -0.77
SCAF1-202ENST00000595242 TAS2R3Q9NYW6 316 aa10.24□□□□□ -0.77
SCAF1-202ENST00000595242 KAAG1Q9UBP8 84 aa10.24□□□□□ -0.77
SCAF1-202ENST00000595242 PFDN2Q9UHV9 154 aa10.24□□□□□ -0.77
SCAF1-202ENST00000595242 TRGV10A0A0A0MS01 117 aa10.23□□□□□ -0.77
SCAF1-202ENST00000595242 IGHV3-43A0A0B4J1X8 118 aa10.23□□□□□ -0.77
SCAF1-202ENST00000595242 A0A1W2PRX2 142 aa10.23□□□□□ -0.77
SCAF1-202ENST00000595242 RBFOX2O43251 390 aaKnown RBP eCLIP10.23□□□□□ -0.77
SCAF1-202ENST00000595242 GYPAP02724 150 aa10.23□□□□□ -0.77
SCAF1-202ENST00000595242 FGF2P09038 288 aa10.23□□□□□ -0.77
SCAF1-202ENST00000595242 IGHV3-43DP0DP04 118 aa10.23□□□□□ -0.77
SCAF1-202ENST00000595242 LPAR6P43657 344 aa10.23□□□□□ -0.77
SCAF1-202ENST00000595242 RAB7AP51149 207 aa10.23□□□□□ -0.77
SCAF1-202ENST00000595242 POLR2GP62487 172 aaKnown RBP eCLIP10.23□□□□□ -0.77
SCAF1-202ENST00000595242 EWSR1Q01844 656 aaKnown RBP eCLIP10.23□□□□□ -0.77
SCAF1-202ENST00000595242 BAXQ07812 192 aa10.23□□□□□ -0.77
SCAF1-202ENST00000595242 Q3ZCU0 254 aa10.23□□□□□ -0.77
SCAF1-202ENST00000595242 CXorf66Q5JRM2 361 aaPredicted RBP10.23□□□□□ -0.77
SCAF1-202ENST00000595242 FAM74A1Q5RGS3 127 aa10.23□□□□□ -0.77
SCAF1-202ENST00000595242 RPL7L1Q6DKI1 246 aaKnown RBP10.23□□□□□ -0.77
SCAF1-202ENST00000595242 EIF5AL1Q6IS14 154 aaKnown RBP10.23□□□□□ -0.77
SCAF1-202ENST00000595242 DUX4L9Q6RFH8 374 aaPredicted RBP10.23□□□□□ -0.77
SCAF1-202ENST00000595242 FGFRL1Q8N441 504 aa10.23□□□□□ -0.77
SCAF1-202ENST00000595242 FAM216BQ8N7L0 139 aa10.23□□□□□ -0.77
SCAF1-202ENST00000595242 ZNF439Q8NDP4 499 aa10.23□□□□□ -0.77
SCAF1-202ENST00000595242 RFESDQ8TAC1 157 aa10.23□□□□□ -0.77
SCAF1-202ENST00000595242 MUC7Q8TAX7 377 aa10.23□□□□□ -0.77
SCAF1-202ENST00000595242 WIPF2Q8TF74 440 aaPredicted RBP10.23□□□□□ -0.77
SCAF1-202ENST00000595242 RAB40CQ96S21 281 aa10.23□□□□□ -0.77
SCAF1-202ENST00000595242 CCL13Q99616 98 aa10.23□□□□□ -0.77
SCAF1-202ENST00000595242 SLC25A31Q9H0C2 315 aa10.23□□□□□ -0.77
SCAF1-202ENST00000595242 IFI27L2Q9H2X8 130 aa10.23□□□□□ -0.77
SCAF1-202ENST00000595242 PSG11Q9UQ72 335 aa10.23□□□□□ -0.77
SCAF1-202ENST00000595242 LINC00312Q9Y6C7 94 aa10.23□□□□□ -0.77
SCAF1-202ENST00000595242 ST8SIA5O15466 376 aa10.22□□□□□ -0.77
SCAF1-202ENST00000595242 CHST1O43916 411 aa10.22□□□□□ -0.77
SCAF1-202ENST00000595242 PROP1O75360 226 aa10.22□□□□□ -0.77
SCAF1-202ENST00000595242 PF4V1P10720 104 aa10.22□□□□□ -0.77
SCAF1-202ENST00000595242 DUTP33316 252 aaKnown RBP10.22□□□□□ -0.77
SCAF1-202ENST00000595242 ARHGDIBP52566 201 aa10.22□□□□□ -0.77
SCAF1-202ENST00000595242 AKR1C2P52895 323 aa10.22□□□□□ -0.77
SCAF1-202ENST00000595242 PAX9P55771 341 aa10.22□□□□□ -0.77
SCAF1-202ENST00000595242 BRWD1-AS2P59051 145 aa10.22□□□□□ -0.77
SCAF1-202ENST00000595242 TAS2R30P59541 319 aa10.22□□□□□ -0.77
SCAF1-202ENST00000595242 TOR2AQ5JU69 321 aa10.22□□□□□ -0.77
SCAF1-202ENST00000595242 Q6ZRM9 215 aa10.22□□□□□ -0.77
SCAF1-202ENST00000595242 ODF3L1Q8IXM7 274 aa10.22□□□□□ -0.77
SCAF1-202ENST00000595242 TMEM252Q8N6L7 170 aa10.22□□□□□ -0.77
SCAF1-202ENST00000595242 LY6G5BQ8NDX9 201 aa10.22□□□□□ -0.77
SCAF1-202ENST00000595242 CD300LFQ8TDQ1 290 aa10.22□□□□□ -0.77
SCAF1-202ENST00000595242 RNF141Q8WVD5 230 aa10.22□□□□□ -0.77
SCAF1-202ENST00000595242 C17orf50Q8WW18 174 aa10.22□□□□□ -0.77
SCAF1-202ENST00000595242 ZNF702PQ9H963 129 aa10.22□□□□□ -0.77
SCAF1-202ENST00000595242 ZC4H2Q9NQZ6 224 aa10.22□□□□□ -0.77
SCAF1-202ENST00000595242 IDI2-AS1Q9NZ38 188 aa10.22□□□□□ -0.77
SCAF1-202ENST00000595242 GNG12Q9UBI6 72 aa10.22□□□□□ -0.77
SCAF1-202ENST00000595242 RNF150Q9ULK6 438 aa10.22□□□□□ -0.77
SCAF1-202ENST00000595242 HUWE1Q7Z6Z7 4374 aaKnown RBP10.22□□□□□ -0.77
SCAF1-202ENST00000595242 BORCS7-ASMTA0A0B4J1R7 106 aa10.21□□□□□ -0.77
SCAF1-202ENST00000595242 hADV38S2A0JD32 116 aa10.21□□□□□ -0.77
SCAF1-202ENST00000595242 IGSF23A1L1A6 192 aa10.21□□□□□ -0.77
SCAF1-202ENST00000595242 FAM90A9PA6NNJ1 464 aa10.21□□□□□ -0.77
SCAF1-202ENST00000595242 LINC00473A8K010 186 aa10.21□□□□□ -0.77
SCAF1-202ENST00000595242 C17orf98A8MV24 154 aa10.21□□□□□ -0.77
SCAF1-202ENST00000595242 TOR1AO14656 332 aa10.21□□□□□ -0.77
SCAF1-202ENST00000595242 RAB29O14966 203 aa10.21□□□□□ -0.77
SCAF1-202ENST00000595242 SSSCA1O60232 199 aa10.21□□□□□ -0.77
SCAF1-202ENST00000595242 TMEM50AO95807 157 aa10.21□□□□□ -0.77
SCAF1-202ENST00000595242 PF4P02776 101 aa10.21□□□□□ -0.77
SCAF1-202ENST00000595242 SEC11BP0C7V7 166 aa10.21□□□□□ -0.77
SCAF1-202ENST00000595242 KIR2DS2P43631 304 aa10.21□□□□□ -0.77
SCAF1-202ENST00000595242 GPR12P47775 334 aa10.21□□□□□ -0.77
SCAF1-202ENST00000595242 SULT1A2P50226 295 aa10.21□□□□□ -0.77
SCAF1-202ENST00000595242 VAMP2P63027 116 aa10.21□□□□□ -0.77
SCAF1-202ENST00000595242 LRRC75BQ2VPJ9 315 aa10.21□□□□□ -0.77
SCAF1-202ENST00000595242 AARDQ4LEZ3 155 aa10.21□□□□□ -0.77
SCAF1-202ENST00000595242 SPAG16Q8N0X2 631 aa10.21□□□□□ -0.77
SCAF1-202ENST00000595242 Q8N7P7 452 aa10.21□□□□□ -0.77
SCAF1-202ENST00000595242 RNASE11Q8TAA1 199 aaKnown RBP10.21□□□□□ -0.77
SCAF1-202ENST00000595242 TCTEX1D2Q8WW35 142 aa10.21□□□□□ -0.77
SCAF1-202ENST00000595242 DPF1Q92782 380 aa10.21□□□□□ -0.77
SCAF1-202ENST00000595242 TNFRSF14Q92956 283 aa10.21□□□□□ -0.77
SCAF1-202ENST00000595242 SAT2Q96F10 170 aaPredicted RBP10.21□□□□□ -0.77
SCAF1-202ENST00000595242 BSCL2Q96G97 398 aaPredicted RBP10.21□□□□□ -0.77
SCAF1-202ENST00000595242 GINS3Q9BRX5 216 aa10.21□□□□□ -0.77
SCAF1-202ENST00000595242 CACNG5Q9UF02 275 aa10.21□□□□□ -0.77
SCAF1-202ENST00000595242 WSB1Q9Y6I7 421 aa10.21□□□□□ -0.77
SCAF1-202ENST00000595242 FAM24AA6NFZ4 105 aa10.2□□□□□ -0.78
SCAF1-202ENST00000595242 NUDT19A8MXV4 375 aa10.2□□□□□ -0.78
SCAF1-202ENST00000595242 WRBO00258 174 aa10.2□□□□□ -0.78
SCAF1-202ENST00000595242 RAMP3O60896 148 aa10.2□□□□□ -0.78
SCAF1-202ENST00000595242 S1PR2O95136 353 aa10.2□□□□□ -0.78
SCAF1-202ENST00000595242 UBE2E1P51965 193 aa10.2□□□□□ -0.78
SCAF1-202ENST00000595242 Q8N2B8 174 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms