RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 TMEM140Q9NV12 185 aa13.62□□□□□ -0.23
LIG1-206ENST00000594067 SRRM5B3KS81 715 aa13.62□□□□□ -0.23
LIG1-206ENST00000594067 AQP7O14520 342 aa13.62□□□□□ -0.23
LIG1-206ENST00000594067 SOX15O60248 233 aa13.62□□□□□ -0.23
LIG1-206ENST00000594067 HNF1AP20823 631 aa13.62□□□□□ -0.23
LIG1-206ENST00000594067 OPRK1P41145 380 aa13.62□□□□□ -0.23
LIG1-206ENST00000594067 RPL29P47914 159 aaKnown RBP13.62□□□□□ -0.23
LIG1-206ENST00000594067 LOXL3P58215 753 aa13.62□□□□□ -0.23
LIG1-206ENST00000594067 LOXL4Q96JB6 756 aa13.62□□□□□ -0.23
LIG1-206ENST00000594067 IFI27L2Q9H2X8 130 aa13.62□□□□□ -0.23
LIG1-206ENST00000594067 TMEM106BQ9NUM4 274 aa13.62□□□□□ -0.23
LIG1-206ENST00000594067 PRR33A8MZF0 331 aa13.61□□□□□ -0.23
LIG1-206ENST00000594067 PRSS46E5RG02 174 aa13.61□□□□□ -0.23
LIG1-206ENST00000594067 MGST3O14880 152 aa13.61□□□□□ -0.23
LIG1-206ENST00000594067 LINC00310P59036 64 aa13.61□□□□□ -0.23
LIG1-206ENST00000594067 TDRG1Q3Y452 100 aa13.61□□□□□ -0.23
LIG1-206ENST00000594067 GCSAMQ8N6F7 178 aa13.61□□□□□ -0.23
LIG1-206ENST00000594067 CMTM2Q8TAZ6 248 aa13.61□□□□□ -0.23
LIG1-206ENST00000594067 MDFIC2A0A1B0GVS7 189 aa13.61□□□□□ -0.23
LIG1-206ENST00000594067 MPDU1O75352 247 aa13.61□□□□□ -0.23
LIG1-206ENST00000594067 ZNF25P17030 456 aaPredicted RBP13.61□□□□□ -0.23
LIG1-206ENST00000594067 SELENOTP62341 195 aa13.61□□□□□ -0.23
LIG1-206ENST00000594067 Q6ZWC4 215 aa13.61□□□□□ -0.23
LIG1-206ENST00000594067 OCC1Q8TAD7 63 aa13.61□□□□□ -0.23
LIG1-206ENST00000594067 TUBG2Q9NRH3 451 aa13.61□□□□□ -0.23
LIG1-206ENST00000594067 PLSCR4Q9NRQ2 329 aa13.61□□□□□ -0.23
LIG1-206ENST00000594067 TCF19Q9Y242 345 aa13.61□□□□□ -0.23
LIG1-206ENST00000594067 ASPMQ8IZT6 3477 aa13.6□□□□□ -0.23
LIG1-206ENST00000594067 FAM90A9PA6NNJ1 464 aa13.6□□□□□ -0.23
LIG1-206ENST00000594067 BHLHA15Q7RTS1 189 aaPredicted RBP13.6□□□□□ -0.23
LIG1-206ENST00000594067 MOGAT3Q86VF5 341 aa13.6□□□□□ -0.23
LIG1-206ENST00000594067 SARAFQ96BY9 339 aa13.6□□□□□ -0.23
LIG1-206ENST00000594067 ZNF71Q9NQZ8 489 aaPredicted RBP13.6□□□□□ -0.23
LIG1-206ENST00000594067 HCFC1P51610 2035 aa13.6□□□□□ -0.23
LIG1-206ENST00000594067 SCO2A0A1W2PP80 73 aa13.6□□□□□ -0.23
LIG1-206ENST00000594067 PCNX2A6NKB5 2137 aa13.6□□□□□ -0.23
LIG1-206ENST00000594067 STAG3L2P0CL84 134 aa13.6□□□□□ -0.23
LIG1-206ENST00000594067 STAG3L3P0CL85 134 aa13.6□□□□□ -0.23
LIG1-206ENST00000594067 TIMP3P35625 211 aa13.6□□□□□ -0.23
LIG1-206ENST00000594067 FAM201AQ5SY85 155 aa13.6□□□□□ -0.23
LIG1-206ENST00000594067 ZNF705AQ6ZN79 300 aaPredicted RBP13.6□□□□□ -0.23
LIG1-206ENST00000594067 OR52E5Q8NH55 327 aa13.6□□□□□ -0.23
LIG1-206ENST00000594067 PPP1R35Q8TAP8 253 aa13.6□□□□□ -0.23
LIG1-206ENST00000594067 C1orf159Q96HA4 380 aa13.6□□□□□ -0.23
LIG1-206ENST00000594067 PROCRQ9UNN8 238 aa13.6□□□□□ -0.23
LIG1-206ENST00000594067 TNFSF13O75888 250 aa13.59□□□□□ -0.23
LIG1-206ENST00000594067 ZNF83P51522 516 aa13.59□□□□□ -0.23
LIG1-206ENST00000594067 MZT1Q08AG7 82 aa13.59□□□□□ -0.23
LIG1-206ENST00000594067 CYB5R2Q6BCY4 276 aa13.59□□□□□ -0.23
LIG1-206ENST00000594067 STARD4Q96DR4 205 aa13.59□□□□□ -0.23
LIG1-206ENST00000594067 OR2V2Q96R30 315 aa13.59□□□□□ -0.23
LIG1-206ENST00000594067 HEATR1Q9H583 2144 aaKnown RBP13.59□□□□□ -0.23
LIG1-206ENST00000594067 WT1P19544 449 aaPredicted RBP13.59□□□□□ -0.23
LIG1-206ENST00000594067 TPTE2P1Q5T6R2 138 aa13.59□□□□□ -0.23
LIG1-206ENST00000594067 SPATA31B1PQ5VZV4 182 aa13.59□□□□□ -0.23
LIG1-206ENST00000594067 VHLLQ6RSH7 139 aa13.59□□□□□ -0.23
LIG1-206ENST00000594067 OR10G8Q8NGN5 311 aa13.59□□□□□ -0.23
LIG1-206ENST00000594067 TXNDC17Q9BRA2 123 aa13.59□□□□□ -0.23
LIG1-206ENST00000594067 CALYQ9NYX4 217 aa13.59□□□□□ -0.23
LIG1-206ENST00000594067 F2RL2O00254 374 aa13.58□□□□□ -0.23
LIG1-206ENST00000594067 CXorf1O96002 111 aa13.58□□□□□ -0.23
LIG1-206ENST00000594067 CBLN1P23435 193 aa13.58□□□□□ -0.23
LIG1-206ENST00000594067 THBS3P49746 956 aa13.58□□□□□ -0.23
LIG1-206ENST00000594067 PAFAH1B2P68402 229 aa13.58□□□□□ -0.23
LIG1-206ENST00000594067 TOMM20LQ6UXN7 152 aa13.58□□□□□ -0.23
LIG1-206ENST00000594067 TEX43Q6ZNM6 134 aa13.58□□□□□ -0.23
LIG1-206ENST00000594067 YTHDF2Q9Y5A9 579 aaKnown RBP13.58□□□□□ -0.23
LIG1-206ENST00000594067 M0QZK8 103 aa13.58□□□□□ -0.24
LIG1-206ENST00000594067 ESDP10768 282 aa13.58□□□□□ -0.24
LIG1-206ENST00000594067 TMPRSS3P57727 454 aa13.58□□□□□ -0.24
LIG1-206ENST00000594067 C20orf144Q9BQM9 153 aa13.58□□□□□ -0.24
LIG1-206ENST00000594067 DKK4Q9UBT3 224 aa13.58□□□□□ -0.24
LIG1-206ENST00000594067 SLC25A15Q9Y619 301 aa13.58□□□□□ -0.24
LIG1-206ENST00000594067 TRAV17A0A0B4J275 112 aa13.57□□□□□ -0.24
LIG1-206ENST00000594067 SPRY3O43610 288 aa13.57□□□□□ -0.24
LIG1-206ENST00000594067 IL6RP08887 468 aaPredicted RBP13.57□□□□□ -0.24
LIG1-206ENST00000594067 MYOD1P15172 320 aa13.57□□□□□ -0.24
LIG1-206ENST00000594067 TPPP2P59282 170 aa13.57□□□□□ -0.24
LIG1-206ENST00000594067 CR1LQ2VPA4 569 aa13.57□□□□□ -0.24
LIG1-206ENST00000594067 ARSJQ5FYB0 599 aaPredicted RBP13.57□□□□□ -0.24
LIG1-206ENST00000594067 DDB2Q92466 427 aa13.57□□□□□ -0.24
LIG1-206ENST00000594067 CHODLQ9H9P2 273 aa13.57□□□□□ -0.24
LIG1-206ENST00000594067 NPVFQ9HCQ7 196 aa13.57□□□□□ -0.24
LIG1-206ENST00000594067 SEPSECSQ9HD40 501 aaKnown RBP13.57□□□□□ -0.24
LIG1-206ENST00000594067 TET2Q6N021 2002 aaPredicted RBP13.57□□□□□ -0.24
LIG1-206ENST00000594067 INTS1Q8N201 2190 aaKnown RBP13.57□□□□□ -0.24
LIG1-206ENST00000594067 M0R1B8 84 aa13.57□□□□□ -0.24
LIG1-206ENST00000594067 CGAP01215 116 aa13.57□□□□□ -0.24
LIG1-206ENST00000594067 ZNF90Q03938 601 aa13.57□□□□□ -0.24
LIG1-206ENST00000594067 HLA-DRB5Q30154 266 aa13.57□□□□□ -0.24
LIG1-206ENST00000594067 DUX4L9Q6RFH8 374 aaPredicted RBP13.57□□□□□ -0.24
LIG1-206ENST00000594067 TMEM208Q9BTX3 173 aa13.57□□□□□ -0.24
LIG1-206ENST00000594067 PARD6AQ9NPB6 346 aa13.57□□□□□ -0.24
LIG1-206ENST00000594067 LSM4Q9Y4Z0 139 aaKnown RBP13.57□□□□□ -0.24
LIG1-206ENST00000594067 SERF1AO75920 110 aa13.57□□□□□ -0.24
LIG1-206ENST00000594067 IRF2P14316 349 aa13.57□□□□□ -0.24
LIG1-206ENST00000594067 CT45A1Q5HYN5 189 aa13.57□□□□□ -0.24
LIG1-206ENST00000594067 OR4S2Q8NH73 311 aa13.57□□□□□ -0.24
LIG1-206ENST00000594067 CT45A3Q8NHU0 189 aa13.57□□□□□ -0.24
LIG1-206ENST00000594067 MIEN1Q9BRT3 115 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms