RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 ANKRD34BA5PLL1 514 aa10.75□□□□□ -0.69
CLIP3-205ENST00000592017 FABP12A6NFH5 140 aa10.75□□□□□ -0.69
CLIP3-205ENST00000592017 MARCH11A6NNE9 402 aa10.75□□□□□ -0.69
CLIP3-205ENST00000592017 SEC14L6B5MCN3 397 aa10.75□□□□□ -0.69
CLIP3-205ENST00000592017 TEX22C9J3V5 150 aa10.75□□□□□ -0.69
CLIP3-205ENST00000592017 UPK2O00526 184 aa10.75□□□□□ -0.69
CLIP3-205ENST00000592017 CTDSPLO15194 276 aa10.75□□□□□ -0.69
CLIP3-205ENST00000592017 KRASP01116 189 aa10.75□□□□□ -0.69
CLIP3-205ENST00000592017 CD74P04233 296 aa10.75□□□□□ -0.69
CLIP3-205ENST00000592017 G6PCP35575 357 aa10.75□□□□□ -0.69
CLIP3-205ENST00000592017 SSBP1Q04837 148 aaKnown RBP10.75□□□□□ -0.69
CLIP3-205ENST00000592017 POU2AF1Q16633 256 aa10.75□□□□□ -0.69
CLIP3-205ENST00000592017 DEFB121Q5J5C9 76 aa10.75□□□□□ -0.69
CLIP3-205ENST00000592017 C19orf35Q6ZS72 473 aa10.75□□□□□ -0.69
CLIP3-205ENST00000592017 LHFPL1Q86WI0 220 aa10.75□□□□□ -0.69
CLIP3-205ENST00000592017 DCUN1D4Q92564 292 aa10.75□□□□□ -0.69
CLIP3-205ENST00000592017 A0A1B0GW64 132 aa10.74□□□□□ -0.69
CLIP3-205ENST00000592017 E7EUB6 86 aa10.74□□□□□ -0.69
CLIP3-205ENST00000592017 HSPB1P04792 205 aaKnown RBP10.74□□□□□ -0.69
CLIP3-205ENST00000592017 REG1AP05451 166 aa10.74□□□□□ -0.69
CLIP3-205ENST00000592017 IL6RP08887 468 aaPredicted RBP10.74□□□□□ -0.69
CLIP3-205ENST00000592017 ZNF735P0CB33 412 aa10.74□□□□□ -0.69
CLIP3-205ENST00000592017 AREGP15514 252 aa10.74□□□□□ -0.69
CLIP3-205ENST00000592017 PIGPP57054 158 aa10.74□□□□□ -0.69
CLIP3-205ENST00000592017 RHOGP84095 191 aa10.74□□□□□ -0.69
CLIP3-205ENST00000592017 MEF2DQ14814 521 aa10.74□□□□□ -0.69
CLIP3-205ENST00000592017 ZNF585BQ52M93 769 aa10.74□□□□□ -0.69
CLIP3-205ENST00000592017 C9orf66Q5T8R8 295 aa10.74□□□□□ -0.69
CLIP3-205ENST00000592017 SLC25A42Q86VD7 318 aa10.74□□□□□ -0.69
CLIP3-205ENST00000592017 COMMD5Q9GZQ3 224 aa10.74□□□□□ -0.69
CLIP3-205ENST00000592017 DISC1C4P0D8 188 aa10.73□□□□□ -0.69
CLIP3-205ENST00000592017 OVOL1O14753 267 aa10.73□□□□□ -0.69
CLIP3-205ENST00000592017 RBMXL2O75526 392 aaKnown RBP10.73□□□□□ -0.69
CLIP3-205ENST00000592017 OR2J3O76001 311 aa10.73□□□□□ -0.69
CLIP3-205ENST00000592017 SERPINE2P07093 398 aa10.73□□□□□ -0.69
CLIP3-205ENST00000592017 AKAIN1P0CW23 69 aa10.73□□□□□ -0.69
CLIP3-205ENST00000592017 S100A5P33763 92 aa10.73□□□□□ -0.69
CLIP3-205ENST00000592017 OR2B8PP59922 312 aa10.73□□□□□ -0.69
CLIP3-205ENST00000592017 ZNF45Q02386 682 aa10.73□□□□□ -0.69
CLIP3-205ENST00000592017 PYDC2Q56P42 97 aa10.73□□□□□ -0.69
CLIP3-205ENST00000592017 TTC9CQ8N5M4 171 aa10.73□□□□□ -0.69
CLIP3-205ENST00000592017 OR4C16Q8NGL9 310 aa10.73□□□□□ -0.69
CLIP3-205ENST00000592017 OR13C8Q8NGS7 320 aa10.73□□□□□ -0.69
CLIP3-205ENST00000592017 TERB2Q8NHR7 220 aa10.73□□□□□ -0.69
CLIP3-205ENST00000592017 MARCH1Q8TCQ1 289 aa10.73□□□□□ -0.69
CLIP3-205ENST00000592017 DLX4Q92988 240 aaPredicted RBP10.73□□□□□ -0.69
CLIP3-205ENST00000592017 ZNF486Q96H40 463 aaPredicted RBP10.73□□□□□ -0.69
CLIP3-205ENST00000592017 USMG5Q96IX5 58 aa10.73□□□□□ -0.69
CLIP3-205ENST00000592017 AKIP1Q9NQ31 210 aa10.73□□□□□ -0.69
CLIP3-205ENST00000592017 NSG2Q9Y328 171 aa10.73□□□□□ -0.69
CLIP3-205ENST00000592017 COL7A1Q02388 2944 aa10.73□□□□□ -0.69
CLIP3-205ENST00000592017 FAM223BA6NKX1 122 aa10.72□□□□□ -0.69
CLIP3-205ENST00000592017 NPIPB5A8MRT5 1133 aa10.72□□□□□ -0.69
CLIP3-205ENST00000592017 ZNF701M0R085 212 aaPredicted RBP10.72□□□□□ -0.69
CLIP3-205ENST00000592017 GSTZ1O43708 216 aaPredicted RBP10.72□□□□□ -0.69
CLIP3-205ENST00000592017 SNAPC5O75971 98 aa10.72□□□□□ -0.69
CLIP3-205ENST00000592017 BRI3O95415 125 aa10.72□□□□□ -0.69
CLIP3-205ENST00000592017 RND3P61587 244 aa10.72□□□□□ -0.69
CLIP3-205ENST00000592017 EXOSC2Q13868 293 aaKnown RBP10.72□□□□□ -0.69
CLIP3-205ENST00000592017 FAM223AQ8IWN6 122 aa10.72□□□□□ -0.69
CLIP3-205ENST00000592017 CCDC71LQ8N9Z2 235 aa10.72□□□□□ -0.69
CLIP3-205ENST00000592017 ZFAND1Q8TCF1 268 aa10.72□□□□□ -0.69
CLIP3-205ENST00000592017 MRGPRFQ96AM1 343 aa10.72□□□□□ -0.69
CLIP3-205ENST00000592017 HINT2Q9BX68 163 aa10.72□□□□□ -0.69
CLIP3-205ENST00000592017 QTRT1Q9BXR0 403 aaKnown RBP10.72□□□□□ -0.69
CLIP3-205ENST00000592017 RANGRFQ9HD47 186 aaPredicted RBP10.72□□□□□ -0.69
CLIP3-205ENST00000592017 COPZ2Q9P299 210 aa10.72□□□□□ -0.69
CLIP3-205ENST00000592017 ZNF257Q9Y2Q1 563 aa10.72□□□□□ -0.69
CLIP3-205ENST00000592017 ANKRD20A5PA0PJZ0 165 aa10.71□□□□□ -0.69
CLIP3-205ENST00000592017 CGB1A6NKQ9 187 aa10.71□□□□□ -0.69
CLIP3-205ENST00000592017 H0Y980 276 aa10.71□□□□□ -0.69
CLIP3-205ENST00000592017 SAP30O75446 220 aa10.71□□□□□ -0.69
CLIP3-205ENST00000592017 TRBV12-3P01733 135 aa10.71□□□□□ -0.69
CLIP3-205ENST00000592017 DEFA4P12838 97 aa10.71□□□□□ -0.69
CLIP3-205ENST00000592017 PSMB6P28072 239 aa10.71□□□□□ -0.69
CLIP3-205ENST00000592017 ATP5G2Q06055 141 aa10.71□□□□□ -0.69
CLIP3-205ENST00000592017 TP53RKQ96S44 253 aa10.71□□□□□ -0.69
CLIP3-205ENST00000592017 SOSTQ9BQB4 213 aa10.71□□□□□ -0.69
CLIP3-205ENST00000592017 MCUBQ9NWR8 336 aa10.71□□□□□ -0.69
CLIP3-205ENST00000592017 PEF1Q9UBV8 284 aaKnown RBP10.71□□□□□ -0.69
CLIP3-205ENST00000592017 C14orf166Q9Y224 244 aaKnown RBP10.71□□□□□ -0.69
CLIP3-205ENST00000592017 C3orf85A0A1B0GTC6 90 aa10.7□□□□□ -0.7
CLIP3-205ENST00000592017 DHFRP00374 187 aa10.7□□□□□ -0.7
CLIP3-205ENST00000592017 IGKV1-39P01597 117 aa10.7□□□□□ -0.7
CLIP3-205ENST00000592017 IGHV3-23P01764 117 aa10.7□□□□□ -0.7
CLIP3-205ENST00000592017 IGKV1D-39P04432 117 aa10.7□□□□□ -0.7
CLIP3-205ENST00000592017 CTRB1P17538 263 aa10.7□□□□□ -0.7
CLIP3-205ENST00000592017 ZP3P21754 424 aa10.7□□□□□ -0.7
CLIP3-205ENST00000592017 ECI1P42126 302 aa10.7□□□□□ -0.7
CLIP3-205ENST00000592017 TRIM16LQ309B1 348 aa10.7□□□□□ -0.7
CLIP3-205ENST00000592017 C15orf32Q32M92 178 aa10.7□□□□□ -0.7
CLIP3-205ENST00000592017 SP6Q3SY56 376 aa10.7□□□□□ -0.7
CLIP3-205ENST00000592017 CTRB2Q6GPI1 263 aa10.7□□□□□ -0.7
CLIP3-205ENST00000592017 C11orf87Q6NUJ2 197 aa10.7□□□□□ -0.7
CLIP3-205ENST00000592017 ZNF343Q6P1L6 599 aa10.7□□□□□ -0.7
CLIP3-205ENST00000592017 H2BFWTQ7Z2G1 175 aa10.7□□□□□ -0.7
CLIP3-205ENST00000592017 NECAP1Q8NC96 275 aa10.7□□□□□ -0.7
CLIP3-205ENST00000592017 OR10W1Q8NGF6 305 aa10.7□□□□□ -0.7
CLIP3-205ENST00000592017 OR51S1Q8NGJ8 323 aa10.7□□□□□ -0.7
CLIP3-205ENST00000592017 OR1L8Q8NGR8 309 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms