RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 MRGPRG-AS1Q2M3A8 158 aa7.81□□□□□ -1.16
BRCA1-227ENST00000591849 C9orf66Q5T8R8 295 aa7.81□□□□□ -1.16
BRCA1-227ENST00000591849 ASPHD1Q5U4P2 390 aa7.81□□□□□ -1.16
BRCA1-227ENST00000591849 TTC9CQ8N5M4 171 aa7.81□□□□□ -1.16
BRCA1-227ENST00000591849 CCDC71LQ8N9Z2 235 aa7.81□□□□□ -1.16
BRCA1-227ENST00000591849 ADAD2Q8NCV1 583 aaKnown RBP7.81□□□□□ -1.16
BRCA1-227ENST00000591849 ZNF486Q96H40 463 aaPredicted RBP7.81□□□□□ -1.16
BRCA1-227ENST00000591849 HINT2Q9BX68 163 aa7.81□□□□□ -1.16
BRCA1-227ENST00000591849 RANGRFQ9HD47 186 aaPredicted RBP7.81□□□□□ -1.16
BRCA1-227ENST00000591849 C14orf166Q9Y224 244 aaKnown RBP7.81□□□□□ -1.16
BRCA1-227ENST00000591849 IGHV4OR15-8A0A075B7B6 117 aa7.8□□□□□ -1.16
BRCA1-227ENST00000591849 A0A087WW49 117 aa7.8□□□□□ -1.16
BRCA1-227ENST00000591849 FAM223BA6NKX1 122 aa7.8□□□□□ -1.16
BRCA1-227ENST00000591849 MARCH11A6NNE9 402 aa7.8□□□□□ -1.16
BRCA1-227ENST00000591849 ZNF701M0R085 212 aaPredicted RBP7.8□□□□□ -1.16
BRCA1-227ENST00000591849 PLXNB1O43157 2135 aa7.8□□□□□ -1.16
BRCA1-227ENST00000591849 ATG12O94817 140 aa7.8□□□□□ -1.16
BRCA1-227ENST00000591849 PRH1P02810 166 aa7.8□□□□□ -1.16
BRCA1-227ENST00000591849 PI3P19957 117 aa7.8□□□□□ -1.16
BRCA1-227ENST00000591849 ZP3P21754 424 aa7.8□□□□□ -1.16
BRCA1-227ENST00000591849 G6PCP35575 357 aa7.8□□□□□ -1.16
BRCA1-227ENST00000591849 ECI1P42126 302 aa7.8□□□□□ -1.16
BRCA1-227ENST00000591849 SLURP1P55000 103 aa7.8□□□□□ -1.16
BRCA1-227ENST00000591849 PIGPP57054 158 aa7.8□□□□□ -1.16
BRCA1-227ENST00000591849 RHOGP84095 191 aa7.8□□□□□ -1.16
BRCA1-227ENST00000591849 DEFA5Q01523 94 aa7.8□□□□□ -1.16
BRCA1-227ENST00000591849 TATDN3Q17R31 274 aa7.8□□□□□ -1.16
BRCA1-227ENST00000591849 KPRPQ5T749 579 aaPredicted RBP7.8□□□□□ -1.16
BRCA1-227ENST00000591849 H2BFWTQ7Z2G1 175 aa7.8□□□□□ -1.16
BRCA1-227ENST00000591849 FAM223AQ8IWN6 122 aa7.8□□□□□ -1.16
BRCA1-227ENST00000591849 OR4A16Q8NH70 328 aa7.8□□□□□ -1.16
BRCA1-227ENST00000591849 RNASE11Q8TAA1 199 aaKnown RBP7.8□□□□□ -1.16
BRCA1-227ENST00000591849 MARCH1Q8TCQ1 289 aa7.8□□□□□ -1.16
BRCA1-227ENST00000591849 MRAPQ8TCY5 172 aa7.8□□□□□ -1.16
BRCA1-227ENST00000591849 DCUN1D4Q92564 292 aa7.8□□□□□ -1.16
BRCA1-227ENST00000591849 TSC22D3Q99576 134 aa7.8□□□□□ -1.16
BRCA1-227ENST00000591849 ELOVL1Q9BW60 279 aa7.8□□□□□ -1.16
BRCA1-227ENST00000591849 SLC2A9Q9NRM0 540 aa7.8□□□□□ -1.16
BRCA1-227ENST00000591849 MCUBQ9NWR8 336 aa7.8□□□□□ -1.16
BRCA1-227ENST00000591849 FKBP11Q9NYL4 201 aa7.8□□□□□ -1.16
BRCA1-227ENST00000591849 NDUFA13Q9P0J0 144 aa7.8□□□□□ -1.16
BRCA1-227ENST00000591849 ZNF257Q9Y2Q1 563 aa7.8□□□□□ -1.16
BRCA1-227ENST00000591849 CMYA5Q8N3K9 4069 aa7.79□□□□□ -1.16
BRCA1-227ENST00000591849 TRAV3A0A0B4J244 114 aa7.79□□□□□ -1.16
BRCA1-227ENST00000591849 TEX13DA0A0J9YY54 714 aaPredicted RBP7.79□□□□□ -1.16
BRCA1-227ENST00000591849 GSTZ1O43708 216 aaPredicted RBP7.79□□□□□ -1.16
BRCA1-227ENST00000591849 OR2J3O76001 311 aa7.79□□□□□ -1.16
BRCA1-227ENST00000591849 IL6RP08887 468 aaPredicted RBP7.79□□□□□ -1.16
BRCA1-227ENST00000591849 TRAPPC2P0DI81 140 aa7.79□□□□□ -1.16
BRCA1-227ENST00000591849 TRAPPC2BP0DI82 140 aa7.79□□□□□ -1.16
BRCA1-227ENST00000591849 MYOD1P15172 320 aa7.79□□□□□ -1.16
BRCA1-227ENST00000591849 HIST1H1BP16401 226 aaKnown RBP7.79□□□□□ -1.16
BRCA1-227ENST00000591849 FAUP35544 74 aaKnown RBP7.79□□□□□ -1.16
BRCA1-227ENST00000591849 INPP1P49441 399 aa7.79□□□□□ -1.16
BRCA1-227ENST00000591849 MECP2P51608 486 aaKnown RBP7.79□□□□□ -1.16
BRCA1-227ENST00000591849 AP3S2P59780 193 aa7.79□□□□□ -1.16
BRCA1-227ENST00000591849 RND3P61587 244 aa7.79□□□□□ -1.16
BRCA1-227ENST00000591849 POU2AF1Q16633 256 aa7.79□□□□□ -1.16
BRCA1-227ENST00000591849 TRIM16LQ309B1 348 aa7.79□□□□□ -1.16
BRCA1-227ENST00000591849 ZNF585BQ52M93 769 aa7.79□□□□□ -1.16
BRCA1-227ENST00000591849 DEFB121Q5J5C9 76 aa7.79□□□□□ -1.16
BRCA1-227ENST00000591849 FAAP20Q6NZ36 180 aa7.79□□□□□ -1.16
BRCA1-227ENST00000591849 NECAP1Q8NC96 275 aa7.79□□□□□ -1.16
BRCA1-227ENST00000591849 OR4D10Q8NGI6 311 aa7.79□□□□□ -1.16
BRCA1-227ENST00000591849 OR1L8Q8NGR8 309 aa7.79□□□□□ -1.16
BRCA1-227ENST00000591849 DLX4Q92988 240 aaPredicted RBP7.79□□□□□ -1.16
BRCA1-227ENST00000591849 SCGB3A2Q96PL1 93 aa7.79□□□□□ -1.16
BRCA1-227ENST00000591849 OR4C12Q96R67 309 aa7.79□□□□□ -1.16
BRCA1-227ENST00000591849 PRRT1Q99946 306 aa7.79□□□□□ -1.16
BRCA1-227ENST00000591849 THAP7Q9BT49 309 aaPredicted RBP7.79□□□□□ -1.16
BRCA1-227ENST00000591849 QTRT1Q9BXR0 403 aaKnown RBP7.79□□□□□ -1.16
BRCA1-227ENST00000591849 NXF2Q9GZY0 626 aaKnown RBP7.79□□□□□ -1.16
BRCA1-227ENST00000591849 FAM212BQ9NTI7 297 aaPredicted RBP7.79□□□□□ -1.16
BRCA1-227ENST00000591849 AURKAIP1Q9NWT8 199 aaPredicted RBP7.79□□□□□ -1.16
BRCA1-227ENST00000591849 PEF1Q9UBV8 284 aaKnown RBP7.79□□□□□ -1.16
BRCA1-227ENST00000591849 SCP2D1Q9UJQ7 156 aa7.79□□□□□ -1.16
BRCA1-227ENST00000591849 FBXL7Q9UJT9 491 aa7.79□□□□□ -1.16
BRCA1-227ENST00000591849 PRNDQ9UKY0 176 aa7.79□□□□□ -1.16
BRCA1-227ENST00000591849 NSG2Q9Y328 171 aa7.79□□□□□ -1.16
BRCA1-227ENST00000591849 OR51B2Q9Y5P1 312 aa7.79□□□□□ -1.16
BRCA1-227ENST00000591849 C3orf85A0A1B0GTC6 90 aa7.78□□□□□ -1.16
BRCA1-227ENST00000591849 TEX50A0A1B0GTY4 177 aa7.78□□□□□ -1.16
BRCA1-227ENST00000591849 NPIPB5A8MRT5 1133 aa7.78□□□□□ -1.16
BRCA1-227ENST00000591849 TEX22C9J3V5 150 aa7.78□□□□□ -1.16
BRCA1-227ENST00000591849 SAP30O75446 220 aa7.78□□□□□ -1.16
BRCA1-227ENST00000591849 BRI3O95415 125 aa7.78□□□□□ -1.16
BRCA1-227ENST00000591849 LY86O95711 162 aa7.78□□□□□ -1.16
BRCA1-227ENST00000591849 REG1AP05451 166 aa7.78□□□□□ -1.16
BRCA1-227ENST00000591849 CTSDP07339 412 aaPredicted RBP7.78□□□□□ -1.16
BRCA1-227ENST00000591849 ZNF735P0CB33 412 aa7.78□□□□□ -1.16
BRCA1-227ENST00000591849 OR13C7P0DN81 318 aa7.78□□□□□ -1.16
BRCA1-227ENST00000591849 AREGP15514 252 aa7.78□□□□□ -1.16
BRCA1-227ENST00000591849 PSMB6P28072 239 aa7.78□□□□□ -1.16
BRCA1-227ENST00000591849 INSL3P51460 131 aa7.78□□□□□ -1.16
BRCA1-227ENST00000591849 AKR1C2P52895 323 aa7.78□□□□□ -1.16
BRCA1-227ENST00000591849 OR2B8PP59922 312 aa7.78□□□□□ -1.16
BRCA1-227ENST00000591849 FHL3Q13643 280 aa7.78□□□□□ -1.16
BRCA1-227ENST00000591849 EXOSC2Q13868 293 aaKnown RBP7.78□□□□□ -1.16
BRCA1-227ENST00000591849 RPEL1Q2QD12 228 aa7.78□□□□□ -1.16
BRCA1-227ENST00000591849 SPANXN2Q5MJ10 180 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms