RNA–Protein interactions for RNA: ENST00000591622.1

CIRBP-233, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-233ENST00000591622 FAM223BA6NKX1 122 aa12.62□□□□□ -0.39
CIRBP-233ENST00000591622 MARCH11A6NNE9 402 aa12.62□□□□□ -0.39
CIRBP-233ENST00000591622 NPIPB5A8MRT5 1133 aa12.62□□□□□ -0.39
CIRBP-233ENST00000591622 FGF2P09038 288 aa12.62□□□□□ -0.39
CIRBP-233ENST00000591622 MYOD1P15172 320 aa12.62□□□□□ -0.39
CIRBP-233ENST00000591622 RPA2P15927 270 aa12.62□□□□□ -0.39
CIRBP-233ENST00000591622 ERVK-16P61578 105 aa12.62□□□□□ -0.39
CIRBP-233ENST00000591622 SSBP1Q04837 148 aaKnown RBP12.62□□□□□ -0.39
CIRBP-233ENST00000591622 ZNF585BQ52M93 769 aa12.62□□□□□ -0.39
CIRBP-233ENST00000591622 LHFPL1Q86WI0 220 aa12.62□□□□□ -0.39
CIRBP-233ENST00000591622 FAM223AQ8IWN6 122 aa12.62□□□□□ -0.39
CIRBP-233ENST00000591622 TMEM229BQ8NBD8 167 aa12.62□□□□□ -0.39
CIRBP-233ENST00000591622 C6orf62Q9GZU0 229 aaPredicted RBP12.62□□□□□ -0.39
CIRBP-233ENST00000591622 AKIP1Q9NQ31 210 aa12.62□□□□□ -0.39
CIRBP-233ENST00000591622 RABL2AQ9UBK7 228 aaPredicted RBP12.62□□□□□ -0.39
CIRBP-233ENST00000591622 RABL2BQ9UNT1 228 aa12.62□□□□□ -0.39
CIRBP-233ENST00000591622 DNAH3Q8TD57 4116 aa12.61□□□□□ -0.39
CIRBP-233ENST00000591622 CGB1A6NKQ9 187 aa12.61□□□□□ -0.39
CIRBP-233ENST00000591622 KRASP01116 189 aa12.61□□□□□ -0.39
CIRBP-233ENST00000591622 CD74P04233 296 aa12.61□□□□□ -0.39
CIRBP-233ENST00000591622 AREGP15514 252 aa12.61□□□□□ -0.39
CIRBP-233ENST00000591622 ZP3P21754 424 aa12.61□□□□□ -0.39
CIRBP-233ENST00000591622 TAS2R19P59542 299 aa12.61□□□□□ -0.39
CIRBP-233ENST00000591622 OR2B8PP59922 312 aa12.61□□□□□ -0.39
CIRBP-233ENST00000591622 IL18Q14116 193 aa12.61□□□□□ -0.39
CIRBP-233ENST00000591622 TBC1D26Q86UD7 250 aa12.61□□□□□ -0.39
CIRBP-233ENST00000591622 ZNF429Q86V71 674 aa12.61□□□□□ -0.39
CIRBP-233ENST00000591622 NECAP1Q8NC96 275 aa12.61□□□□□ -0.39
CIRBP-233ENST00000591622 OR4D10Q8NGI6 311 aa12.61□□□□□ -0.39
CIRBP-233ENST00000591622 SMIM4Q8WVI0 70 aa12.61□□□□□ -0.39
CIRBP-233ENST00000591622 COMMD5Q9GZQ3 224 aa12.61□□□□□ -0.39
CIRBP-233ENST00000591622 FAM212BQ9NTI7 297 aaPredicted RBP12.61□□□□□ -0.39
CIRBP-233ENST00000591622 PEF1Q9UBV8 284 aaKnown RBP12.61□□□□□ -0.39
CIRBP-233ENST00000591622 CTDSPLO15194 276 aa12.6□□□□□ -0.39
CIRBP-233ENST00000591622 SAP30O75446 220 aa12.6□□□□□ -0.39
CIRBP-233ENST00000591622 RAB3DO95716 219 aa12.6□□□□□ -0.39
CIRBP-233ENST00000591622 CRYGCP07315 174 aa12.6□□□□□ -0.39
CIRBP-233ENST00000591622 PSMB6P28072 239 aa12.6□□□□□ -0.39
CIRBP-233ENST00000591622 ATP5G2Q06055 141 aa12.6□□□□□ -0.39
CIRBP-233ENST00000591622 STEAP1BQ6NZ63 245 aa12.6□□□□□ -0.39
CIRBP-233ENST00000591622 ACSM6Q6P461 480 aa12.6□□□□□ -0.39
CIRBP-233ENST00000591622 CADM3Q8N126 398 aa12.6□□□□□ -0.39
CIRBP-233ENST00000591622 MCFD2Q8NI22 146 aa12.6□□□□□ -0.39
CIRBP-233ENST00000591622 ZNF486Q96H40 463 aaPredicted RBP12.6□□□□□ -0.39
CIRBP-233ENST00000591622 NXF2Q9GZY0 626 aaKnown RBP12.6□□□□□ -0.39
CIRBP-233ENST00000591622 CCDC160A6NGH7 325 aa12.59□□□□□ -0.39
CIRBP-233ENST00000591622 DHFRP00374 187 aa12.59□□□□□ -0.39
CIRBP-233ENST00000591622 PGAM2P15259 253 aa12.59□□□□□ -0.39
CIRBP-233ENST00000591622 CTRB1P17538 263 aa12.59□□□□□ -0.39
CIRBP-233ENST00000591622 TNFSF8P32971 234 aa12.59□□□□□ -0.39
CIRBP-233ENST00000591622 G6PCP35575 357 aa12.59□□□□□ -0.39
CIRBP-233ENST00000591622 ECI1P42126 302 aa12.59□□□□□ -0.39
CIRBP-233ENST00000591622 KLF5Q13887 457 aaPredicted RBP12.59□□□□□ -0.39
CIRBP-233ENST00000591622 DEFB121Q5J5C9 76 aa12.59□□□□□ -0.39
CIRBP-233ENST00000591622 CTRB2Q6GPI1 263 aa12.59□□□□□ -0.39
CIRBP-233ENST00000591622 C19orf35Q6ZS72 473 aa12.59□□□□□ -0.39
CIRBP-233ENST00000591622 TERB2Q8NHR7 220 aa12.59□□□□□ -0.39
CIRBP-233ENST00000591622 OR2J3O76001 311 aa12.58□□□□□ -0.4
CIRBP-233ENST00000591622 TRBV12-3P01733 135 aa12.58□□□□□ -0.4
CIRBP-233ENST00000591622 PI3P19957 117 aa12.58□□□□□ -0.4
CIRBP-233ENST00000591622 PTBP1P26599 531 aaKnown RBP eCLIP12.58□□□□□ -0.4
CIRBP-233ENST00000591622 RND3P61587 244 aa12.58□□□□□ -0.4
CIRBP-233ENST00000591622 EXOSC2Q13868 293 aaKnown RBP12.58□□□□□ -0.4
CIRBP-233ENST00000591622 KLK9Q2XQG4 91 aa12.58□□□□□ -0.4
CIRBP-233ENST00000591622 C15orf32Q32M92 178 aa12.58□□□□□ -0.4
CIRBP-233ENST00000591622 FANCD2OSQ96PS1 177 aa12.58□□□□□ -0.4
CIRBP-233ENST00000591622 SRSF8Q9BRL6 282 aaKnown RBP12.58□□□□□ -0.4
CIRBP-233ENST00000591622 QTRT1Q9BXR0 403 aaKnown RBP12.58□□□□□ -0.4
CIRBP-233ENST00000591622 RSL24D1Q9UHA3 163 aaKnown RBP12.58□□□□□ -0.4
CIRBP-233ENST00000591622 FBXL7Q9UJT9 491 aa12.58□□□□□ -0.4
CIRBP-233ENST00000591622 KLK9Q9UKQ9 250 aa12.58□□□□□ -0.4
CIRBP-233ENST00000591622 TEX50A0A1B0GTY4 177 aa12.57□□□□□ -0.4
CIRBP-233ENST00000591622 IGLC7A0M8Q6 106 aa12.57□□□□□ -0.4
CIRBP-233ENST00000591622 SNAPC5O75971 98 aa12.57□□□□□ -0.4
CIRBP-233ENST00000591622 REG1AP05451 166 aa12.57□□□□□ -0.4
CIRBP-233ENST00000591622 HIST1H1BP16401 226 aaKnown RBP12.57□□□□□ -0.4
CIRBP-233ENST00000591622 PPP5CP53041 499 aa12.57□□□□□ -0.4
CIRBP-233ENST00000591622 PIGPP57054 158 aa12.57□□□□□ -0.4
CIRBP-233ENST00000591622 MEF2DQ14814 521 aa12.57□□□□□ -0.4
CIRBP-233ENST00000591622 SCGB2B2Q4G0G5 96 aa12.57□□□□□ -0.4
CIRBP-233ENST00000591622 OR4C12Q96R67 309 aa12.57□□□□□ -0.4
CIRBP-233ENST00000591622 SOSTQ9BQB4 213 aa12.57□□□□□ -0.4
CIRBP-233ENST00000591622 ELOVL1Q9BW60 279 aa12.57□□□□□ -0.4
CIRBP-233ENST00000591622 RBM38Q9H0Z9 239 aaKnown RBP12.57□□□□□ -0.4
CIRBP-233ENST00000591622 ZNF256Q9Y2P7 627 aaPredicted RBP12.57□□□□□ -0.4
CIRBP-233ENST00000591622 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.56□□□□□ -0.4
CIRBP-233ENST00000591622 FABP12A6NFH5 140 aa12.56□□□□□ -0.4
CIRBP-233ENST00000591622 GSTZ1O43708 216 aaPredicted RBP12.56□□□□□ -0.4
CIRBP-233ENST00000591622 IGKV1-39P01597 117 aa12.56□□□□□ -0.4
CIRBP-233ENST00000591622 IGKV1D-39P04432 117 aa12.56□□□□□ -0.4
CIRBP-233ENST00000591622 SERPINE2P07093 398 aa12.56□□□□□ -0.4
CIRBP-233ENST00000591622 TRAPPC2P0DI81 140 aa12.56□□□□□ -0.4
CIRBP-233ENST00000591622 TRAPPC2BP0DI82 140 aa12.56□□□□□ -0.4
CIRBP-233ENST00000591622 DEFA4P12838 97 aa12.56□□□□□ -0.4
CIRBP-233ENST00000591622 SYNJ2BPP57105 145 aa12.56□□□□□ -0.4
CIRBP-233ENST00000591622 RPEL1Q2QD12 228 aa12.56□□□□□ -0.4
CIRBP-233ENST00000591622 FAM209BQ5JX69 171 aa12.56□□□□□ -0.4
CIRBP-233ENST00000591622 THOC7Q6I9Y2 204 aaKnown RBP12.56□□□□□ -0.4
CIRBP-233ENST00000591622 FAAP20Q6NZ36 180 aa12.56□□□□□ -0.4
CIRBP-233ENST00000591622 HSD17B13Q7Z5P4 300 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms