RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 KRTAP10-11P60412 298 aa8.9□□□□□ -0.98
VMP1-211ENST00000591315 RPL8P62917 257 aaKnown RBP8.9□□□□□ -0.98
VMP1-211ENST00000591315 RUNX1Q01196 453 aa8.9□□□□□ -0.98
VMP1-211ENST00000591315 SSBP1Q04837 148 aaKnown RBP8.9□□□□□ -0.98
VMP1-211ENST00000591315 FHL3Q13643 280 aa8.9□□□□□ -0.98
VMP1-211ENST00000591315 IZUMO4Q1ZYL8 232 aa8.9□□□□□ -0.98
VMP1-211ENST00000591315 SP6Q3SY56 376 aa8.9□□□□□ -0.98
VMP1-211ENST00000591315 PYDC2Q56P42 97 aa8.9□□□□□ -0.98
VMP1-211ENST00000591315 KPRPQ5T749 579 aaPredicted RBP8.9□□□□□ -0.98
VMP1-211ENST00000591315 OR51S1Q8NGJ8 323 aa8.9□□□□□ -0.98
VMP1-211ENST00000591315 OR6Q1Q8NGQ2 317 aa8.9□□□□□ -0.98
VMP1-211ENST00000591315 TRIM63Q969Q1 353 aa8.9□□□□□ -0.98
VMP1-211ENST00000591315 TP53RKQ96S44 253 aa8.9□□□□□ -0.98
VMP1-211ENST00000591315 THAP7Q9BT49 309 aaPredicted RBP8.9□□□□□ -0.98
VMP1-211ENST00000591315 ANKRD34BA5PLL1 514 aa8.89□□□□□ -0.99
VMP1-211ENST00000591315 TRBV12-3P01733 135 aa8.89□□□□□ -0.99
VMP1-211ENST00000591315 LGALS1P09382 135 aaKnown RBP8.89□□□□□ -0.99
VMP1-211ENST00000591315 AKAIN1P0CW23 69 aa8.89□□□□□ -0.99
VMP1-211ENST00000591315 VAMP1P23763 118 aa8.89□□□□□ -0.99
VMP1-211ENST00000591315 SLC6A1P30531 599 aa8.89□□□□□ -0.99
VMP1-211ENST00000591315 OR2B8PP59922 312 aa8.89□□□□□ -0.99
VMP1-211ENST00000591315 KLF9Q13886 244 aaPredicted RBP8.89□□□□□ -0.99
VMP1-211ENST00000591315 LPCAT3Q6P1A2 487 aa8.89□□□□□ -0.99
VMP1-211ENST00000591315 OR10W1Q8NGF6 305 aa8.89□□□□□ -0.99
VMP1-211ENST00000591315 VSTM2AQ8TAG5 236 aa8.89□□□□□ -0.99
VMP1-211ENST00000591315 CD300LFQ8TDQ1 290 aa8.89□□□□□ -0.99
VMP1-211ENST00000591315 DCUN1D4Q92564 292 aa8.89□□□□□ -0.99
VMP1-211ENST00000591315 BORCS5Q969J3 196 aa8.89□□□□□ -0.99
VMP1-211ENST00000591315 SPIN2AQ99865 258 aa8.89□□□□□ -0.99
VMP1-211ENST00000591315 SPIN2BQ9BPZ2 258 aa8.89□□□□□ -0.99
VMP1-211ENST00000591315 RTBDNQ9BSG5 229 aaPredicted RBP8.89□□□□□ -0.99
VMP1-211ENST00000591315 COMMD9Q9P000 198 aa8.89□□□□□ -0.99
VMP1-211ENST00000591315 S4R3C0 116 aa8.89□□□□□ -0.99
VMP1-211ENST00000591315 SORL1Q92673 2214 aa8.89□□□□□ -0.99
VMP1-211ENST00000591315 MARCH11A6NNE9 402 aa8.88□□□□□ -0.99
VMP1-211ENST00000591315 DISC1C4P0D8 188 aa8.88□□□□□ -0.99
VMP1-211ENST00000591315 OR2J3O76001 311 aa8.88□□□□□ -0.99
VMP1-211ENST00000591315 S100A5P33763 92 aa8.88□□□□□ -0.99
VMP1-211ENST00000591315 MAS1LP35410 378 aa8.88□□□□□ -0.99
VMP1-211ENST00000591315 ERVK-16P61578 105 aa8.88□□□□□ -0.99
VMP1-211ENST00000591315 RND3P61587 244 aa8.88□□□□□ -0.99
VMP1-211ENST00000591315 RHOGP84095 191 aa8.88□□□□□ -0.99
VMP1-211ENST00000591315 ZNF616Q08AN1 781 aa8.88□□□□□ -0.99
VMP1-211ENST00000591315 MEF2DQ14814 521 aa8.88□□□□□ -0.99
VMP1-211ENST00000591315 Q8N402 240 aa8.88□□□□□ -0.99
VMP1-211ENST00000591315 TTC9CQ8N5M4 171 aa8.88□□□□□ -0.99
VMP1-211ENST00000591315 OR4A5Q8NH83 315 aa8.88□□□□□ -0.99
VMP1-211ENST00000591315 DLX4Q92988 240 aaPredicted RBP8.88□□□□□ -0.99
VMP1-211ENST00000591315 SEC22AQ96IW7 307 aa8.88□□□□□ -0.99
VMP1-211ENST00000591315 C5orf66Q9H5L9 145 aa8.88□□□□□ -0.99
VMP1-211ENST00000591315 SLA2Q9H6Q3 261 aa8.88□□□□□ -0.99
VMP1-211ENST00000591315 AKIP1Q9NQ31 210 aa8.88□□□□□ -0.99
VMP1-211ENST00000591315 RABL2AQ9UBK7 228 aaPredicted RBP8.88□□□□□ -0.99
VMP1-211ENST00000591315 RABL2BQ9UNT1 228 aa8.88□□□□□ -0.99
VMP1-211ENST00000591315 DMRT1Q9Y5R6 373 aa8.88□□□□□ -0.99
VMP1-211ENST00000591315 TEX50A0A1B0GTY4 177 aa8.87□□□□□ -0.99
VMP1-211ENST00000591315 C13orf42A0A1B0GVH6 325 aa8.87□□□□□ -0.99
VMP1-211ENST00000591315 IGLC7A0M8Q6 106 aa8.87□□□□□ -0.99
VMP1-211ENST00000591315 H3BUA1 57 aa8.87□□□□□ -0.99
VMP1-211ENST00000591315 CREBL2O60519 120 aaPredicted RBP8.87□□□□□ -0.99
VMP1-211ENST00000591315 NDUFB8O95169 186 aa8.87□□□□□ -0.99
VMP1-211ENST00000591315 IGKV1-5P01602 117 aa8.87□□□□□ -0.99
VMP1-211ENST00000591315 IGHV3-23P01764 117 aa8.87□□□□□ -0.99
VMP1-211ENST00000591315 CTSDP07339 412 aaPredicted RBP8.87□□□□□ -0.99
VMP1-211ENST00000591315 DPF1Q92782 380 aa8.87□□□□□ -0.99
VMP1-211ENST00000591315 RCC1LQ96I51 464 aaKnown RBP8.87□□□□□ -0.99
VMP1-211ENST00000591315 TMEM68Q96MH6 324 aa8.87□□□□□ -0.99
VMP1-211ENST00000591315 FANCD2OSQ96PS1 177 aa8.87□□□□□ -0.99
VMP1-211ENST00000591315 SDHCQ99643 169 aaPredicted RBP8.87□□□□□ -0.99
VMP1-211ENST00000591315 HINT2Q9BX68 163 aa8.87□□□□□ -0.99
VMP1-211ENST00000591315 SRRQ9GZT4 340 aa8.87□□□□□ -0.99
VMP1-211ENST00000591315 MCUBQ9NWR8 336 aa8.87□□□□□ -0.99
VMP1-211ENST00000591315 PRR13Q9NZ81 148 aa8.87□□□□□ -0.99
VMP1-211ENST00000591315 TRBV9A0A0B4J1U6 114 aa8.86□□□□□ -0.99
VMP1-211ENST00000591315 A0A0G2JRQ6 117 aa8.86□□□□□ -0.99
VMP1-211ENST00000591315 C3orf85A0A1B0GTC6 90 aa8.86□□□□□ -0.99
VMP1-211ENST00000591315 LINC01619G3V211 115 aa8.86□□□□□ -0.99
VMP1-211ENST00000591315 H0Y980 276 aa8.86□□□□□ -0.99
VMP1-211ENST00000591315 HSPB1P04792 205 aaKnown RBP8.86□□□□□ -0.99
VMP1-211ENST00000591315 CTRB1P17538 263 aa8.86□□□□□ -0.99
VMP1-211ENST00000591315 PSMB6P28072 239 aa8.86□□□□□ -0.99
VMP1-211ENST00000591315 S100GP29377 79 aa8.86□□□□□ -0.99
VMP1-211ENST00000591315 CD40LGP29965 261 aa8.86□□□□□ -0.99
VMP1-211ENST00000591315 ETV6P41212 452 aa8.86□□□□□ -0.99
VMP1-211ENST00000591315 BAK1Q16611 211 aa8.86□□□□□ -0.99
VMP1-211ENST00000591315 CTRB2Q6GPI1 263 aa8.86□□□□□ -0.99
VMP1-211ENST00000591315 LHFPL5Q8TAF8 219 aa8.86□□□□□ -0.99
VMP1-211ENST00000591315 ZFAND1Q8TCF1 268 aa8.86□□□□□ -0.99
VMP1-211ENST00000591315 TMEM230Q96A57 120 aa8.86□□□□□ -0.99
VMP1-211ENST00000591315 ZNF486Q96H40 463 aaPredicted RBP8.86□□□□□ -0.99
VMP1-211ENST00000591315 AIFM2Q9BRQ8 373 aa8.86□□□□□ -0.99
VMP1-211ENST00000591315 COMMD5Q9GZQ3 224 aa8.86□□□□□ -0.99
VMP1-211ENST00000591315 COPZ2Q9P299 210 aa8.86□□□□□ -0.99
VMP1-211ENST00000591315 GPR132Q9UNW8 380 aa8.86□□□□□ -0.99
VMP1-211ENST00000591315 OR51B2Q9Y5P1 312 aa8.86□□□□□ -0.99
VMP1-211ENST00000591315 DNAH9Q9NYC9 4486 aa8.86□□□□□ -0.99
VMP1-211ENST00000591315 WI2-2373I1.2A0A1W2PRP0 233 aa8.85□□□□□ -0.99
VMP1-211ENST00000591315 NPIPB5A8MRT5 1133 aa8.85□□□□□ -0.99
VMP1-211ENST00000591315 SEC14L6B5MCN3 397 aa8.85□□□□□ -0.99
VMP1-211ENST00000591315 BRI3O95415 125 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms