RNA–Protein interactions for RNA: ENST00000588713.1

LIG3-211, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-211ENST00000588713 OR2T10Q8NGZ9 312 aa3.45□□□□□ -1.86
LIG3-211ENST00000588713 OR10J5Q8NHC4 309 aa3.45□□□□□ -1.86
LIG3-211ENST00000588713 PLPPR1Q8TBJ4 325 aa3.45□□□□□ -1.86
LIG3-211ENST00000588713 SCGB1C1Q8TD33 95 aa3.45□□□□□ -1.86
LIG3-211ENST00000588713 NEK7Q8TDX7 302 aa3.45□□□□□ -1.86
LIG3-211ENST00000588713 LSM10Q969L4 123 aaKnown RBP3.45□□□□□ -1.86
LIG3-211ENST00000588713 REEP6Q96HR9 211 aa3.45□□□□□ -1.86
LIG3-211ENST00000588713 LYZL4Q96KX0 146 aa3.45□□□□□ -1.86
LIG3-211ENST00000588713 MS4A10Q96PG2 267 aa3.45□□□□□ -1.86
LIG3-211ENST00000588713 MIEN1Q9BRT3 115 aa3.45□□□□□ -1.86
LIG3-211ENST00000588713 ATG101Q9BSB4 218 aa3.45□□□□□ -1.86
LIG3-211ENST00000588713 ABHD14AQ9BUJ0 271 aa3.45□□□□□ -1.86
LIG3-211ENST00000588713 VAMP8Q9BV40 100 aa3.45□□□□□ -1.86
LIG3-211ENST00000588713 PRDM14Q9GZV8 571 aa3.45□□□□□ -1.86
LIG3-211ENST00000588713 MAGT1Q9H0U3 335 aa3.45□□□□□ -1.86
LIG3-211ENST00000588713 PARLQ9H300 379 aa3.45□□□□□ -1.86
LIG3-211ENST00000588713 RBKSQ9H477 322 aa3.45□□□□□ -1.86
LIG3-211ENST00000588713 PNO1Q9NRX1 252 aaKnown RBP3.45□□□□□ -1.86
LIG3-211ENST00000588713 HIF1ANQ9NWT6 349 aa3.45□□□□□ -1.86
LIG3-211ENST00000588713 ELOVL5Q9NYP7 299 aa3.45□□□□□ -1.86
LIG3-211ENST00000588713 ZNF319Q9P2F9 582 aa3.45□□□□□ -1.86
LIG3-211ENST00000588713 PRSS50Q9UI38 385 aa3.45□□□□□ -1.86
LIG3-211ENST00000588713 FUT9Q9Y231 359 aa3.45□□□□□ -1.86
LIG3-211ENST00000588713 ZFP30Q9Y2G7 519 aa3.45□□□□□ -1.86
LIG3-211ENST00000588713 UBE2J1Q9Y385 318 aaPredicted RBP3.45□□□□□ -1.86
LIG3-211ENST00000588713 TRBV9A0A0B4J1U6 114 aa3.44□□□□□ -1.86
LIG3-211ENST00000588713 KIR2DS1A0A191URI9 304 aa3.44□□□□□ -1.86
LIG3-211ENST00000588713 LOC102725191A0A1B0GVB3 256 aa3.44□□□□□ -1.86
LIG3-211ENST00000588713 A0A1W2PN81 502 aa3.44□□□□□ -1.86
LIG3-211ENST00000588713 AQP7P3A6NL99 342 aa3.44□□□□□ -1.86
LIG3-211ENST00000588713 FAM90A26D6RGX4 464 aa3.44□□□□□ -1.86
LIG3-211ENST00000588713 NPIPB11E5RHQ5 1161 aa3.44□□□□□ -1.86
LIG3-211ENST00000588713 F6UZH7 168 aa3.44□□□□□ -1.86
LIG3-211ENST00000588713 K7EIL1 84 aa3.44□□□□□ -1.86
LIG3-211ENST00000588713 M0R135 149 aa3.44□□□□□ -1.86
LIG3-211ENST00000588713 NDUFS8O00217 210 aa3.44□□□□□ -1.86
LIG3-211ENST00000588713 DEGS1O15121 323 aa3.44□□□□□ -1.86
LIG3-211ENST00000588713 MLNRO43193 412 aa3.44□□□□□ -1.86
LIG3-211ENST00000588713 YPEL1O60688 119 aa3.44□□□□□ -1.86
LIG3-211ENST00000588713 TUSC2O75896 110 aa3.44□□□□□ -1.86
LIG3-211ENST00000588713 SCGB1D1O95968 90 aa3.44□□□□□ -1.86
LIG3-211ENST00000588713 HPRT1P00492 218 aa3.44□□□□□ -1.86
LIG3-211ENST00000588713 GYPAP02724 150 aa3.44□□□□□ -1.86
LIG3-211ENST00000588713 RNASE1P07998 156 aaKnown RBP3.44□□□□□ -1.86
LIG3-211ENST00000588713 CTXN2P0C2S0 81 aa3.44□□□□□ -1.86
LIG3-211ENST00000588713 IRF2P14316 349 aa3.44□□□□□ -1.86
LIG3-211ENST00000588713 GZMHP20718 246 aa3.44□□□□□ -1.86
LIG3-211ENST00000588713 PRTN3P24158 256 aa3.44□□□□□ -1.86
LIG3-211ENST00000588713 FKBP2P26885 142 aaKnown RBP3.44□□□□□ -1.86
LIG3-211ENST00000588713 CHRNA7P36544 502 aa3.44□□□□□ -1.86
LIG3-211ENST00000588713 KIR2DS4P43632 304 aa3.44□□□□□ -1.86
LIG3-211ENST00000588713 EFNA4P52798 201 aa3.44□□□□□ -1.86
LIG3-211ENST00000588713 ELLP55199 621 aaPredicted RBP3.44□□□□□ -1.86
LIG3-211ENST00000588713 PAX9P55771 341 aa3.44□□□□□ -1.86
LIG3-211ENST00000588713 RBM11P57052 281 aaKnown RBP3.44□□□□□ -1.86
LIG3-211ENST00000588713 KRTAP10-3P60369 221 aa3.44□□□□□ -1.86
LIG3-211ENST00000588713 YPEL3P61236 119 aaPredicted RBP3.44□□□□□ -1.86
LIG3-211ENST00000588713 TMEM267Q0VDI3 215 aaPredicted RBP3.44□□□□□ -1.86
LIG3-211ENST00000588713 MALLQ13021 153 aa3.44□□□□□ -1.86
LIG3-211ENST00000588713 KIR2DS1Q14954 304 aa3.44□□□□□ -1.86
LIG3-211ENST00000588713 LRRC75BQ2VPJ9 315 aa3.44□□□□□ -1.86
LIG3-211ENST00000588713 PLPPR5Q32ZL2 321 aa3.44□□□□□ -1.86
LIG3-211ENST00000588713 TPTE2P1Q5T6R2 138 aa3.44□□□□□ -1.86
LIG3-211ENST00000588713 LCE4AQ5TA78 99 aa3.44□□□□□ -1.86
LIG3-211ENST00000588713 PRAMEF20Q5VT98 475 aa3.44□□□□□ -1.86
LIG3-211ENST00000588713 TMEM42Q69YG0 159 aa3.44□□□□□ -1.86
LIG3-211ENST00000588713 ZNF880Q6PDB4 577 aa3.44□□□□□ -1.86
LIG3-211ENST00000588713 TOMM20LQ6UXN7 152 aa3.44□□□□□ -1.86
LIG3-211ENST00000588713 SSX7Q7RTT5 188 aa3.44□□□□□ -1.86
LIG3-211ENST00000588713 NUFIP2Q7Z417 695 aaKnown RBP3.44□□□□□ -1.86
LIG3-211ENST00000588713 C1QL2Q7Z5L3 287 aa3.44□□□□□ -1.86
LIG3-211ENST00000588713 LINC00596Q86U02 117 aa3.44□□□□□ -1.86
LIG3-211ENST00000588713 OSR2Q8N2R0 312 aa3.44□□□□□ -1.86
LIG3-211ENST00000588713 GJC3Q8NFK1 279 aa3.44□□□□□ -1.86
LIG3-211ENST00000588713 CMTM2Q8TAZ6 248 aa3.44□□□□□ -1.86
LIG3-211ENST00000588713 MRPL30Q8TCC3 161 aaKnown RBP3.44□□□□□ -1.86
LIG3-211ENST00000588713 ORAOV1Q8WV07 137 aa3.44□□□□□ -1.86
LIG3-211ENST00000588713 SPTSSAQ969W0 71 aa3.44□□□□□ -1.86
LIG3-211ENST00000588713 STARD4Q96DR4 205 aa3.44□□□□□ -1.86
LIG3-211ENST00000588713 BORCS8Q96FH0 119 aa3.44□□□□□ -1.86
LIG3-211ENST00000588713 NEIL1Q96FI4 390 aaPredicted RBP3.44□□□□□ -1.86
LIG3-211ENST00000588713 ZNF799Q96GE5 643 aa3.44□□□□□ -1.86
LIG3-211ENST00000588713 WDYHV1Q96HA8 205 aa3.44□□□□□ -1.86
LIG3-211ENST00000588713 CYYR1Q96J86 154 aa3.44□□□□□ -1.86
LIG3-211ENST00000588713 YPEL2Q96QA6 119 aa3.44□□□□□ -1.86
LIG3-211ENST00000588713 TXNDC17Q9BRA2 123 aa3.44□□□□□ -1.86
LIG3-211ENST00000588713 RSG1Q9BU20 258 aa3.44□□□□□ -1.86
LIG3-211ENST00000588713 OR2J1Q9GZK6 312 aa3.44□□□□□ -1.86
LIG3-211ENST00000588713 WDR61Q9GZS3 305 aaKnown RBP3.44□□□□□ -1.86
LIG3-211ENST00000588713 WNT5BQ9H1J7 359 aa3.44□□□□□ -1.86
LIG3-211ENST00000588713 RPRMQ9NS64 109 aa3.44□□□□□ -1.86
LIG3-211ENST00000588713 MBNL3Q9NUK0 354 aaKnown RBP3.44□□□□□ -1.86
LIG3-211ENST00000588713 TAAR3PQ9P1P4 343 aa3.44□□□□□ -1.86
LIG3-211ENST00000588713 BOKQ9UMX3 212 aaPredicted RBP3.44□□□□□ -1.86
LIG3-211ENST00000588713 PIGLQ9Y2B2 252 aa3.44□□□□□ -1.86
LIG3-211ENST00000588713 PXMP4Q9Y6I8 212 aa3.44□□□□□ -1.86
LIG3-211ENST00000588713 LYSTQ99698 3801 aa3.44□□□□□ -1.86
LIG3-211ENST00000588713 NCKAP5O14513 1909 aa3.43□□□□□ -1.86
LIG3-211ENST00000588713 TRBV6-6A0A0A6YYG2 114 aa3.43□□□□□ -1.86
LIG3-211ENST00000588713 MDFIC2A0A1B0GVS7 189 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms