RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 C4orf3Q8WVX3 66 aa15.7■□□□□ 0.1
DDX39A-207ENST00000588542 DEDD2Q8WXF8 326 aa15.7■□□□□ 0.1
DDX39A-207ENST00000588542 SEC22AQ96IW7 307 aa15.7■□□□□ 0.1
DDX39A-207ENST00000588542 MS4A10Q96PG2 267 aa15.7■□□□□ 0.1
DDX39A-207ENST00000588542 SPIN2AQ99865 258 aa15.7■□□□□ 0.1
DDX39A-207ENST00000588542 SPIN2BQ9BPZ2 258 aa15.7■□□□□ 0.1
DDX39A-207ENST00000588542 BATF3Q9NR55 127 aa15.7■□□□□ 0.1
DDX39A-207ENST00000588542 C14orf166Q9Y224 244 aaKnown RBP15.7■□□□□ 0.1
DDX39A-207ENST00000588542 VSIG4Q9Y279 399 aa15.7■□□□□ 0.1
DDX39A-207ENST00000588542 NOTCH1P46531 2555 aa15.69■□□□□ 0.1
DDX39A-207ENST00000588542 HMX3A6NHT5 357 aa15.69■□□□□ 0.1
DDX39A-207ENST00000588542 BRI3O95415 125 aa15.69■□□□□ 0.1
DDX39A-207ENST00000588542 OR9G9P0C7N8 305 aa15.69■□□□□ 0.1
DDX39A-207ENST00000588542 ZNF45Q02386 682 aa15.69■□□□□ 0.1
DDX39A-207ENST00000588542 DEFB136Q30KP8 78 aa15.69■□□□□ 0.1
DDX39A-207ENST00000588542 SP6Q3SY56 376 aa15.69■□□□□ 0.1
DDX39A-207ENST00000588542 ADAD2Q8NCV1 583 aaKnown RBP15.69■□□□□ 0.1
DDX39A-207ENST00000588542 RAX2Q96IS3 184 aa15.69■□□□□ 0.1
DDX39A-207ENST00000588542 AKIP1Q9NQ31 210 aa15.69■□□□□ 0.1
DDX39A-207ENST00000588542 H3BUA1 57 aa15.68■□□□□ 0.1
DDX39A-207ENST00000588542 I3L521 148 aa15.68■□□□□ 0.1
DDX39A-207ENST00000588542 PF4P02776 101 aa15.68■□□□□ 0.1
DDX39A-207ENST00000588542 SERPINE2P07093 398 aa15.68■□□□□ 0.1
DDX39A-207ENST00000588542 TPPP2P59282 170 aa15.68■□□□□ 0.1
DDX39A-207ENST00000588542 OR2B8PP59922 312 aa15.68■□□□□ 0.1
DDX39A-207ENST00000588542 ZNF57Q68EA5 555 aaPredicted RBP15.68■□□□□ 0.1
DDX39A-207ENST00000588542 LINC00299Q6ZSB3 139 aa15.68■□□□□ 0.1
DDX39A-207ENST00000588542 TTC9CQ8N5M4 171 aa15.68■□□□□ 0.1
DDX39A-207ENST00000588542 TMEM230Q96A57 120 aa15.68■□□□□ 0.1
DDX39A-207ENST00000588542 DUX3Q96PT4 197 aa15.68■□□□□ 0.1
DDX39A-207ENST00000588542 P2RX4Q99571 388 aa15.68■□□□□ 0.1
DDX39A-207ENST00000588542 SLA2Q9H6Q3 261 aa15.68■□□□□ 0.1
DDX39A-207ENST00000588542 CRYM-AS1A6NIL9 109 aa15.67■□□□□ 0.1
DDX39A-207ENST00000588542 TRGV3P03979 118 aa15.67■□□□□ 0.1
DDX39A-207ENST00000588542 UCP1P25874 307 aa15.67■□□□□ 0.1
DDX39A-207ENST00000588542 CD40LGP29965 261 aa15.67■□□□□ 0.1
DDX39A-207ENST00000588542 MYCNOSP40205 109 aa15.67■□□□□ 0.1
DDX39A-207ENST00000588542 RUNX1Q01196 453 aa15.67■□□□□ 0.1
DDX39A-207ENST00000588542 TRIQKQ629K1 86 aa15.67■□□□□ 0.1
DDX39A-207ENST00000588542 LINC00482Q8N8I6 264 aa15.67■□□□□ 0.1
DDX39A-207ENST00000588542 WFDC9Q8NEX5 89 aa15.67■□□□□ 0.1
DDX39A-207ENST00000588542 FYTTD1Q96QD9 318 aaKnown RBP15.67■□□□□ 0.1
DDX39A-207ENST00000588542 NAA60Q9H7X0 242 aa15.67■□□□□ 0.1
DDX39A-207ENST00000588542 ZNF355PQ9NSJ1 428 aa15.67■□□□□ 0.1
DDX39A-207ENST00000588542 COA4Q9NYJ1 87 aa15.67■□□□□ 0.1
DDX39A-207ENST00000588542 NSG2Q9Y328 171 aa15.67■□□□□ 0.1
DDX39A-207ENST00000588542 NOTCH3Q9UM47 2321 aa15.66■□□□□ 0.1
DDX39A-207ENST00000588542 CCL24O00175 119 aa15.66■□□□□ 0.1
DDX39A-207ENST00000588542 RBMXL2O75526 392 aaKnown RBP15.66■□□□□ 0.1
DDX39A-207ENST00000588542 IGKV1-5P01602 117 aa15.66■□□□□ 0.1
DDX39A-207ENST00000588542 IL7P13232 177 aa15.66■□□□□ 0.1
DDX39A-207ENST00000588542 MRPL41Q8IXM3 137 aaKnown RBP15.66■□□□□ 0.1
DDX39A-207ENST00000588542 GLYATL2Q8WU03 294 aa15.66■□□□□ 0.1
DDX39A-207ENST00000588542 SCGB3A2Q96PL1 93 aa15.66■□□□□ 0.1
DDX39A-207ENST00000588542 OR5B12Q96R08 314 aa15.66■□□□□ 0.1
DDX39A-207ENST00000588542 PTTG2Q9NZH5 202 aa15.66■□□□□ 0.1
DDX39A-207ENST00000588542 MEGF8Q7Z7M0 2845 aa15.65■□□□□ 0.1
DDX39A-207ENST00000588542 TEX13DA0A0J9YY54 714 aaPredicted RBP15.65■□□□□ 0.1
DDX39A-207ENST00000588542 TEX50A0A1B0GTY4 177 aa15.65■□□□□ 0.1
DDX39A-207ENST00000588542 DBX1A6NMT0 343 aa15.65■□□□□ 0.1
DDX39A-207ENST00000588542 B3GALNT1O75752 331 aa15.65■□□□□ 0.1
DDX39A-207ENST00000588542 OR5AC1P0C628 307 aa15.65■□□□□ 0.1
DDX39A-207ENST00000588542 P0C879 139 aa15.65■□□□□ 0.1
DDX39A-207ENST00000588542 AREGP15514 252 aa15.65■□□□□ 0.1
DDX39A-207ENST00000588542 C19orf35Q6ZS72 473 aa15.65■□□□□ 0.1
DDX39A-207ENST00000588542 COMMD5Q9GZQ3 224 aa15.65■□□□□ 0.1
DDX39A-207ENST00000588542 TMEM222Q9H0R3 208 aa15.65■□□□□ 0.1
DDX39A-207ENST00000588542 ALX4Q9H161 411 aaPredicted RBP15.65■□□□□ 0.1
DDX39A-207ENST00000588542 DNAH3Q8TD57 4116 aa15.65■□□□□ 0.1
DDX39A-207ENST00000588542 NPIPB5A8MRT5 1133 aa15.64■□□□□ 0.09
DDX39A-207ENST00000588542 SNAPC5O75971 98 aa15.64■□□□□ 0.09
DDX39A-207ENST00000588542 IGHV3-11P01762 117 aa15.64■□□□□ 0.09
DDX39A-207ENST00000588542 PRH1P02810 166 aa15.64■□□□□ 0.09
DDX39A-207ENST00000588542 DEFA5Q01523 94 aa15.64■□□□□ 0.09
DDX39A-207ENST00000588542 FHL3Q13643 280 aa15.64■□□□□ 0.09
DDX39A-207ENST00000588542 IZUMO4Q1ZYL8 232 aa15.64■□□□□ 0.09
DDX39A-207ENST00000588542 H2BFWTQ7Z2G1 175 aa15.64■□□□□ 0.09
DDX39A-207ENST00000588542 SLC25A42Q86VD7 318 aa15.64■□□□□ 0.09
DDX39A-207ENST00000588542 LHFPL5Q8TAF8 219 aa15.64■□□□□ 0.09
DDX39A-207ENST00000588542 TMEM14BQ9NUH8 114 aa15.64■□□□□ 0.09
DDX39A-207ENST00000588542 TRBV9A0A0B4J1U6 114 aa15.63■□□□□ 0.09
DDX39A-207ENST00000588542 IGLC7A0M8Q6 106 aa15.63■□□□□ 0.09
DDX39A-207ENST00000588542 C15orf61A6NNL5 157 aa15.63■□□□□ 0.09
DDX39A-207ENST00000588542 CDS2O95674 445 aa15.63■□□□□ 0.09
DDX39A-207ENST00000588542 CRYGCP07315 174 aa15.63■□□□□ 0.09
DDX39A-207ENST00000588542 LGALS1P09382 135 aaKnown RBP15.63■□□□□ 0.09
DDX39A-207ENST00000588542 CTRB1P17538 263 aa15.63■□□□□ 0.09
DDX39A-207ENST00000588542 CD33P20138 364 aa15.63■□□□□ 0.09
DDX39A-207ENST00000588542 INPP1P49441 399 aa15.63■□□□□ 0.09
DDX39A-207ENST00000588542 SUPT4H1P63272 117 aaKnown RBP15.63■□□□□ 0.09
DDX39A-207ENST00000588542 TRIM16LQ309B1 348 aa15.63■□□□□ 0.09
DDX39A-207ENST00000588542 CTRB2Q6GPI1 263 aa15.63■□□□□ 0.09
DDX39A-207ENST00000588542 OR11H1Q8NG94 326 aa15.63■□□□□ 0.09
DDX39A-207ENST00000588542 OR10W1Q8NGF6 305 aa15.63■□□□□ 0.09
DDX39A-207ENST00000588542 OR1L8Q8NGR8 309 aa15.63■□□□□ 0.09
DDX39A-207ENST00000588542 GALNT14Q96FL9 552 aa15.63■□□□□ 0.09
DDX39A-207ENST00000588542 TSC22D3Q99576 134 aa15.63■□□□□ 0.09
DDX39A-207ENST00000588542 SLC25A21Q9BQT8 299 aaPredicted RBP15.63■□□□□ 0.09
DDX39A-207ENST00000588542 QTRT1Q9BXR0 403 aaKnown RBP15.63■□□□□ 0.09
DDX39A-207ENST00000588542 NDUFA4L2Q9NRX3 87 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 198.9 ms