RNA–Protein interactions for RNA: ENST00000588423.1

RETREG3-206, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-206ENST00000588423 SLC2A9Q9NRM0 540 aa12.41□□□□□ -0.42
RETREG3-206ENST00000588423 TMEM140Q9NV12 185 aa12.41□□□□□ -0.42
RETREG3-206ENST00000588423 ZMAT5Q9UDW3 170 aaKnown RBP12.41□□□□□ -0.42
RETREG3-206ENST00000588423 ZNF257Q9Y2Q1 563 aa12.41□□□□□ -0.42
RETREG3-206ENST00000588423 TRBV9A0A0B4J1U6 114 aa12.4□□□□□ -0.42
RETREG3-206ENST00000588423 FABP12A6NFH5 140 aa12.4□□□□□ -0.42
RETREG3-206ENST00000588423 FAM223BA6NKX1 122 aa12.4□□□□□ -0.42
RETREG3-206ENST00000588423 E7EUB6 86 aa12.4□□□□□ -0.42
RETREG3-206ENST00000588423 IGHV3-11P01762 117 aa12.4□□□□□ -0.42
RETREG3-206ENST00000588423 APELAP0DMC3 54 aa12.4□□□□□ -0.42
RETREG3-206ENST00000588423 PGAM2P15259 253 aa12.4□□□□□ -0.42
RETREG3-206ENST00000588423 LPAR6P43657 344 aa12.4□□□□□ -0.42
RETREG3-206ENST00000588423 C9orf66Q5T8R8 295 aa12.4□□□□□ -0.42
RETREG3-206ENST00000588423 FAM223AQ8IWN6 122 aa12.4□□□□□ -0.42
RETREG3-206ENST00000588423 ZFAND1Q8TCF1 268 aa12.4□□□□□ -0.42
RETREG3-206ENST00000588423 SRSF8Q9BRL6 282 aaKnown RBP12.4□□□□□ -0.42
RETREG3-206ENST00000588423 PTTG2Q9NZH5 202 aa12.4□□□□□ -0.42
RETREG3-206ENST00000588423 IGHV4OR15-8A0A075B7B6 117 aa12.39□□□□□ -0.43
RETREG3-206ENST00000588423 A0A087WW49 117 aa12.39□□□□□ -0.43
RETREG3-206ENST00000588423 A0A1B0GW64 132 aa12.39□□□□□ -0.43
RETREG3-206ENST00000588423 HMX3A6NHT5 357 aa12.39□□□□□ -0.43
RETREG3-206ENST00000588423 CRYGCP07315 174 aa12.39□□□□□ -0.43
RETREG3-206ENST00000588423 AKAIN1P0CW23 69 aa12.39□□□□□ -0.43
RETREG3-206ENST00000588423 OR2B8PP59922 312 aa12.39□□□□□ -0.43
RETREG3-206ENST00000588423 KLK9Q2XQG4 91 aa12.39□□□□□ -0.43
RETREG3-206ENST00000588423 THOC7Q6I9Y2 204 aaKnown RBP12.39□□□□□ -0.43
RETREG3-206ENST00000588423 ZNF343Q6P1L6 599 aa12.39□□□□□ -0.43
RETREG3-206ENST00000588423 COMMD5Q9GZQ3 224 aa12.39□□□□□ -0.43
RETREG3-206ENST00000588423 RANGRFQ9HD47 186 aaPredicted RBP12.39□□□□□ -0.43
RETREG3-206ENST00000588423 AURKAIP1Q9NWT8 199 aaPredicted RBP12.39□□□□□ -0.43
RETREG3-206ENST00000588423 KLK9Q9UKQ9 250 aa12.39□□□□□ -0.43
RETREG3-206ENST00000588423 TRAV3A0A0B4J244 114 aa12.38□□□□□ -0.43
RETREG3-206ENST00000588423 ANKRD20A5PA0PJZ0 165 aa12.38□□□□□ -0.43
RETREG3-206ENST00000588423 CGB1A6NKQ9 187 aa12.38□□□□□ -0.43
RETREG3-206ENST00000588423 DISC1C4P0D8 188 aa12.38□□□□□ -0.43
RETREG3-206ENST00000588423 RPA2P15927 270 aa12.38□□□□□ -0.43
RETREG3-206ENST00000588423 PSMB6P28072 239 aa12.38□□□□□ -0.43
RETREG3-206ENST00000588423 S100A5P33763 92 aa12.38□□□□□ -0.43
RETREG3-206ENST00000588423 INSL3P51460 131 aa12.38□□□□□ -0.43
RETREG3-206ENST00000588423 PIGPP57054 158 aa12.38□□□□□ -0.43
RETREG3-206ENST00000588423 SURF2Q15527 256 aaPredicted RBP12.38□□□□□ -0.43
RETREG3-206ENST00000588423 SCGB2B2Q4G0G5 96 aa12.38□□□□□ -0.43
RETREG3-206ENST00000588423 LINC00299Q6ZSB3 139 aa12.38□□□□□ -0.43
RETREG3-206ENST00000588423 OR6Q1Q8NGQ2 317 aa12.38□□□□□ -0.43
RETREG3-206ENST00000588423 DCUN1D4Q92564 292 aa12.38□□□□□ -0.43
RETREG3-206ENST00000588423 FYTTD1Q96QD9 318 aaKnown RBP12.38□□□□□ -0.43
RETREG3-206ENST00000588423 SEC14L6B5MCN3 397 aa12.37□□□□□ -0.43
RETREG3-206ENST00000588423 H0Y980 276 aa12.37□□□□□ -0.43
RETREG3-206ENST00000588423 OVOL1O14753 267 aa12.37□□□□□ -0.43
RETREG3-206ENST00000588423 DHFRP00374 187 aa12.37□□□□□ -0.43
RETREG3-206ENST00000588423 KRASP01116 189 aa12.37□□□□□ -0.43
RETREG3-206ENST00000588423 CTRB1P17538 263 aa12.37□□□□□ -0.43
RETREG3-206ENST00000588423 ZP3P21754 424 aa12.37□□□□□ -0.43
RETREG3-206ENST00000588423 G6PCP35575 357 aa12.37□□□□□ -0.43
RETREG3-206ENST00000588423 PPP5CP53041 499 aa12.37□□□□□ -0.43
RETREG3-206ENST00000588423 SLURP1P55000 103 aa12.37□□□□□ -0.43
RETREG3-206ENST00000588423 KRTAP10-11P60412 298 aa12.37□□□□□ -0.43
RETREG3-206ENST00000588423 RHOGP84095 191 aa12.37□□□□□ -0.43
RETREG3-206ENST00000588423 ZNF45Q02386 682 aa12.37□□□□□ -0.43
RETREG3-206ENST00000588423 FAM209BQ5JX69 171 aa12.37□□□□□ -0.43
RETREG3-206ENST00000588423 CTRB2Q6GPI1 263 aa12.37□□□□□ -0.43
RETREG3-206ENST00000588423 CCDC71LQ8N9Z2 235 aa12.37□□□□□ -0.43
RETREG3-206ENST00000588423 NECAP1Q8NC96 275 aa12.37□□□□□ -0.43
RETREG3-206ENST00000588423 OR4C16Q8NGL9 310 aa12.37□□□□□ -0.43
RETREG3-206ENST00000588423 DLX4Q92988 240 aaPredicted RBP12.37□□□□□ -0.43
RETREG3-206ENST00000588423 MRGPRFQ96AM1 343 aa12.37□□□□□ -0.43
RETREG3-206ENST00000588423 TSC22D3Q99576 134 aa12.37□□□□□ -0.43
RETREG3-206ENST00000588423 AKIP1Q9NQ31 210 aa12.37□□□□□ -0.43
RETREG3-206ENST00000588423 SLC2A8Q9NY64 477 aa12.37□□□□□ -0.43
RETREG3-206ENST00000588423 NOTCH1P46531 2555 aa12.37□□□□□ -0.43
RETREG3-206ENST00000588423 DNAH3Q8TD57 4116 aa12.37□□□□□ -0.43
RETREG3-206ENST00000588423 RBMXL2O75526 392 aaKnown RBP12.36□□□□□ -0.43
RETREG3-206ENST00000588423 B3GALNT1O75752 331 aa12.36□□□□□ -0.43
RETREG3-206ENST00000588423 SNAPC5O75971 98 aa12.36□□□□□ -0.43
RETREG3-206ENST00000588423 PRB2P02812 416 aaPredicted RBP12.36□□□□□ -0.43
RETREG3-206ENST00000588423 SERPINE2P07093 398 aa12.36□□□□□ -0.43
RETREG3-206ENST00000588423 CTSDP07339 412 aaPredicted RBP12.36□□□□□ -0.43
RETREG3-206ENST00000588423 MYOD1P15172 320 aa12.36□□□□□ -0.43
RETREG3-206ENST00000588423 AREGP15514 252 aa12.36□□□□□ -0.43
RETREG3-206ENST00000588423 HIST1H1BP16401 226 aaKnown RBP12.36□□□□□ -0.43
RETREG3-206ENST00000588423 HOXD3P31249 432 aaPredicted RBP12.36□□□□□ -0.43
RETREG3-206ENST00000588423 ATP5G2Q06055 141 aa12.36□□□□□ -0.43
RETREG3-206ENST00000588423 FAAP20Q6NZ36 180 aa12.36□□□□□ -0.43
RETREG3-206ENST00000588423 HSD17B13Q7Z5P4 300 aaPredicted RBP12.36□□□□□ -0.43
RETREG3-206ENST00000588423 CCDC190Q86UF4 302 aa12.36□□□□□ -0.43
RETREG3-206ENST00000588423 OR13C8Q8NGS7 320 aa12.36□□□□□ -0.43
RETREG3-206ENST00000588423 SEC22AQ96IW7 307 aa12.36□□□□□ -0.43
RETREG3-206ENST00000588423 PRRT1Q99946 306 aa12.36□□□□□ -0.43
RETREG3-206ENST00000588423 QTRT1Q9BXR0 403 aaKnown RBP12.36□□□□□ -0.43
RETREG3-206ENST00000588423 FKBP11Q9NYL4 201 aa12.36□□□□□ -0.43
RETREG3-206ENST00000588423 COPZ2Q9P299 210 aa12.36□□□□□ -0.43
RETREG3-206ENST00000588423 PEF1Q9UBV8 284 aaKnown RBP12.36□□□□□ -0.43
RETREG3-206ENST00000588423 V9GYH0 126 aa12.36□□□□□ -0.43
RETREG3-206ENST00000588423 TEX50A0A1B0GTY4 177 aa12.35□□□□□ -0.43
RETREG3-206ENST00000588423 IGLC7A0M8Q6 106 aa12.35□□□□□ -0.43
RETREG3-206ENST00000588423 IGKV1-39P01597 117 aa12.35□□□□□ -0.43
RETREG3-206ENST00000588423 PRH1P02810 166 aa12.35□□□□□ -0.43
RETREG3-206ENST00000588423 IGKV1D-39P04432 117 aa12.35□□□□□ -0.43
RETREG3-206ENST00000588423 PI3P19957 117 aa12.35□□□□□ -0.43
RETREG3-206ENST00000588423 ZNF429Q86V71 674 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms