RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 HRASLSQ9HDD0 168 aa12.56□□□□□ -0.4
ERBB2-222ENST00000584908 ZNF355PQ9NSJ1 428 aa12.56□□□□□ -0.4
ERBB2-222ENST00000584908 COA4Q9NYJ1 87 aa12.56□□□□□ -0.4
ERBB2-222ENST00000584908 NDUFA13Q9P0J0 144 aa12.56□□□□□ -0.4
ERBB2-222ENST00000584908 V9GYH0 126 aa12.56□□□□□ -0.4
ERBB2-222ENST00000584908 PRKDCP78527 4128 aaKnown RBP12.55□□□□□ -0.4
ERBB2-222ENST00000584908 TRAV3A0A0B4J244 114 aa12.55□□□□□ -0.4
ERBB2-222ENST00000584908 CGB1A6NKQ9 187 aa12.55□□□□□ -0.4
ERBB2-222ENST00000584908 MPPED1O15442 326 aa12.55□□□□□ -0.4
ERBB2-222ENST00000584908 CRYGCP07315 174 aa12.55□□□□□ -0.4
ERBB2-222ENST00000584908 APELAP0DMC3 54 aa12.55□□□□□ -0.4
ERBB2-222ENST00000584908 ECI1P42126 302 aa12.55□□□□□ -0.4
ERBB2-222ENST00000584908 OR2B8PP59922 312 aa12.55□□□□□ -0.4
ERBB2-222ENST00000584908 ERVK-16P61578 105 aa12.55□□□□□ -0.4
ERBB2-222ENST00000584908 SURF2Q15527 256 aaPredicted RBP12.55□□□□□ -0.4
ERBB2-222ENST00000584908 PDLIM3Q53GG5 364 aaPredicted RBP12.55□□□□□ -0.4
ERBB2-222ENST00000584908 OR4C16Q8NGL9 310 aa12.55□□□□□ -0.4
ERBB2-222ENST00000584908 ZFAND1Q8TCF1 268 aa12.55□□□□□ -0.4
ERBB2-222ENST00000584908 SLC2A8Q9NY64 477 aa12.55□□□□□ -0.4
ERBB2-222ENST00000584908 ZNF257Q9Y2Q1 563 aa12.55□□□□□ -0.4
ERBB2-222ENST00000584908 C13orf42A0A1B0GVH6 325 aa12.54□□□□□ -0.4
ERBB2-222ENST00000584908 HMX3A6NHT5 357 aa12.54□□□□□ -0.4
ERBB2-222ENST00000584908 DISC1C4P0D8 188 aa12.54□□□□□ -0.4
ERBB2-222ENST00000584908 LINC01619G3V211 115 aa12.54□□□□□ -0.4
ERBB2-222ENST00000584908 RBMXL2O75526 392 aaKnown RBP12.54□□□□□ -0.4
ERBB2-222ENST00000584908 IGKV1-39P01597 117 aa12.54□□□□□ -0.4
ERBB2-222ENST00000584908 IGHV3-11P01762 117 aa12.54□□□□□ -0.4
ERBB2-222ENST00000584908 IGKV1D-39P04432 117 aa12.54□□□□□ -0.4
ERBB2-222ENST00000584908 HSPB1P04792 205 aaKnown RBP12.54□□□□□ -0.4
ERBB2-222ENST00000584908 PGAM2P15259 253 aa12.54□□□□□ -0.4
ERBB2-222ENST00000584908 S100A5P33763 92 aa12.54□□□□□ -0.4
ERBB2-222ENST00000584908 ETV6P41212 452 aa12.54□□□□□ -0.4
ERBB2-222ENST00000584908 PIGPP57054 158 aa12.54□□□□□ -0.4
ERBB2-222ENST00000584908 ZNF45Q02386 682 aa12.54□□□□□ -0.4
ERBB2-222ENST00000584908 FAAP20Q6NZ36 180 aa12.54□□□□□ -0.4
ERBB2-222ENST00000584908 REC114Q7Z4M0 266 aa12.54□□□□□ -0.4
ERBB2-222ENST00000584908 SEC22AQ96IW7 307 aa12.54□□□□□ -0.4
ERBB2-222ENST00000584908 SRSF8Q9BRL6 282 aaKnown RBP12.54□□□□□ -0.4
ERBB2-222ENST00000584908 IGHV4OR15-8A0A075B7B6 117 aa12.53□□□□□ -0.4
ERBB2-222ENST00000584908 A0A087WW49 117 aa12.53□□□□□ -0.4
ERBB2-222ENST00000584908 FAM223BA6NKX1 122 aa12.53□□□□□ -0.4
ERBB2-222ENST00000584908 H0Y980 276 aa12.53□□□□□ -0.4
ERBB2-222ENST00000584908 KRASP01116 189 aa12.53□□□□□ -0.4
ERBB2-222ENST00000584908 CTSDP07339 412 aaPredicted RBP12.53□□□□□ -0.4
ERBB2-222ENST00000584908 MYOD1P15172 320 aa12.53□□□□□ -0.4
ERBB2-222ENST00000584908 RPA2P15927 270 aa12.53□□□□□ -0.4
ERBB2-222ENST00000584908 CTRB1P17538 263 aa12.53□□□□□ -0.4
ERBB2-222ENST00000584908 PI3P19957 117 aa12.53□□□□□ -0.4
ERBB2-222ENST00000584908 G6PCP35575 357 aa12.53□□□□□ -0.4
ERBB2-222ENST00000584908 PPP5CP53041 499 aa12.53□□□□□ -0.4
ERBB2-222ENST00000584908 RAB25P57735 213 aa12.53□□□□□ -0.4
ERBB2-222ENST00000584908 ZNF79Q15937 498 aa12.53□□□□□ -0.4
ERBB2-222ENST00000584908 SCGB2B2Q4G0G5 96 aa12.53□□□□□ -0.4
ERBB2-222ENST00000584908 CTRB2Q6GPI1 263 aa12.53□□□□□ -0.4
ERBB2-222ENST00000584908 THOC7Q6I9Y2 204 aaKnown RBP12.53□□□□□ -0.4
ERBB2-222ENST00000584908 ZNF343Q6P1L6 599 aa12.53□□□□□ -0.4
ERBB2-222ENST00000584908 FAM223AQ8IWN6 122 aa12.53□□□□□ -0.4
ERBB2-222ENST00000584908 OR13C8Q8NGS7 320 aa12.53□□□□□ -0.4
ERBB2-222ENST00000584908 MARCH1Q8TCQ1 289 aa12.53□□□□□ -0.4
ERBB2-222ENST00000584908 DPF1Q92782 380 aa12.53□□□□□ -0.4
ERBB2-222ENST00000584908 TRIM63Q969Q1 353 aa12.53□□□□□ -0.4
ERBB2-222ENST00000584908 PRRT1Q99946 306 aa12.53□□□□□ -0.4
ERBB2-222ENST00000584908 THAP7Q9BT49 309 aaPredicted RBP12.53□□□□□ -0.4
ERBB2-222ENST00000584908 COMMD5Q9GZQ3 224 aa12.53□□□□□ -0.4
ERBB2-222ENST00000584908 B3GALNT1O75752 331 aa12.52□□□□□ -0.41
ERBB2-222ENST00000584908 AREGP15514 252 aa12.52□□□□□ -0.41
ERBB2-222ENST00000584908 PSMB6P28072 239 aa12.52□□□□□ -0.41
ERBB2-222ENST00000584908 NECAP1Q8NC96 275 aa12.52□□□□□ -0.41
ERBB2-222ENST00000584908 FYTTD1Q96QD9 318 aaKnown RBP12.52□□□□□ -0.41
ERBB2-222ENST00000584908 TSC22D3Q99576 134 aa12.52□□□□□ -0.41
ERBB2-222ENST00000584908 QTRT1Q9BXR0 403 aaKnown RBP12.52□□□□□ -0.41
ERBB2-222ENST00000584908 RANGRFQ9HD47 186 aaPredicted RBP12.52□□□□□ -0.41
ERBB2-222ENST00000584908 AKIP1Q9NQ31 210 aa12.52□□□□□ -0.41
ERBB2-222ENST00000584908 IGLC7A0M8Q6 106 aa12.51□□□□□ -0.41
ERBB2-222ENST00000584908 DPPA5A6NC42 116 aa12.51□□□□□ -0.41
ERBB2-222ENST00000584908 RHOGP84095 191 aa12.51□□□□□ -0.41
ERBB2-222ENST00000584908 C9orf66Q5T8R8 295 aa12.51□□□□□ -0.41
ERBB2-222ENST00000584908 HSD17B13Q7Z5P4 300 aaPredicted RBP12.51□□□□□ -0.41
ERBB2-222ENST00000584908 Q8N402 240 aa12.51□□□□□ -0.41
ERBB2-222ENST00000584908 CCDC71LQ8N9Z2 235 aa12.51□□□□□ -0.41
ERBB2-222ENST00000584908 OR51S1Q8NGJ8 323 aa12.51□□□□□ -0.41
ERBB2-222ENST00000584908 OR6Q1Q8NGQ2 317 aa12.51□□□□□ -0.41
ERBB2-222ENST00000584908 DEDD2Q8WXF8 326 aa12.51□□□□□ -0.41
ERBB2-222ENST00000584908 DCUN1D4Q92564 292 aa12.51□□□□□ -0.41
ERBB2-222ENST00000584908 DLX4Q92988 240 aaPredicted RBP12.51□□□□□ -0.41
ERBB2-222ENST00000584908 FANCD2OSQ96PS1 177 aa12.51□□□□□ -0.41
ERBB2-222ENST00000584908 TP53RKQ96S44 253 aa12.51□□□□□ -0.41
ERBB2-222ENST00000584908 RTBDNQ9BSG5 229 aaPredicted RBP12.51□□□□□ -0.41
ERBB2-222ENST00000584908 NDUFA4L2Q9NRX3 87 aa12.51□□□□□ -0.41
ERBB2-222ENST00000584908 TMEM14BQ9NUH8 114 aa12.51□□□□□ -0.41
ERBB2-222ENST00000584908 COPZ2Q9P299 210 aa12.51□□□□□ -0.41
ERBB2-222ENST00000584908 PRNDQ9UKY0 176 aa12.51□□□□□ -0.41
ERBB2-222ENST00000584908 GPR132Q9UNW8 380 aa12.51□□□□□ -0.41
ERBB2-222ENST00000584908 C3orf85A0A1B0GTC6 90 aa12.5□□□□□ -0.41
ERBB2-222ENST00000584908 TEX50A0A1B0GTY4 177 aa12.5□□□□□ -0.41
ERBB2-222ENST00000584908 OVOL1O14753 267 aa12.5□□□□□ -0.41
ERBB2-222ENST00000584908 DHFRP00374 187 aa12.5□□□□□ -0.41
ERBB2-222ENST00000584908 PRH1P02810 166 aa12.5□□□□□ -0.41
ERBB2-222ENST00000584908 SERPINE2P07093 398 aa12.5□□□□□ -0.41
ERBB2-222ENST00000584908 P0C879 139 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms