RNA–Protein interactions for RNA: ENST00000583441.1

SMCHD1-209, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 657 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-209ENST00000583441 RAB14P61106 215 aa1.42□□□□□ -2.18
SMCHD1-209ENST00000583441 OR2F1Q13607 317 aa1.42□□□□□ -2.18
SMCHD1-209ENST00000583441 PMAIP1Q13794 54 aa1.42□□□□□ -2.18
SMCHD1-209ENST00000583441 ACSM3Q53FZ2 586 aa1.42□□□□□ -2.18
SMCHD1-209ENST00000583441 KTN1-AS1Q86SY8 53 aa1.42□□□□□ -2.18
SMCHD1-209ENST00000583441 C1orf158Q8N1D5 194 aa1.42□□□□□ -2.18
SMCHD1-209ENST00000583441 CHST6Q9GZX3 395 aa1.42□□□□□ -2.18
SMCHD1-209ENST00000583441 RBM7Q9Y580 266 aaKnown RBP1.42□□□□□ -2.18
SMCHD1-209ENST00000583441 PCNX2A6NKB5 2137 aa1.42□□□□□ -2.18
SMCHD1-209ENST00000583441 ICE1Q9Y2F5 2266 aa1.41□□□□□ -2.18
SMCHD1-209ENST00000583441 COL5A3P25940 1745 aaPredicted RBP1.41□□□□□ -2.18
SMCHD1-209ENST00000583441 A0A1B0GVG6 124 aa1.41□□□□□ -2.18
SMCHD1-209ENST00000583441 H3BT86 120 aa1.41□□□□□ -2.18
SMCHD1-209ENST00000583441 LEPROTO15243 131 aa1.41□□□□□ -2.18
SMCHD1-209ENST00000583441 NSA2O95478 260 aaKnown RBP1.41□□□□□ -2.18
SMCHD1-209ENST00000583441 TNNC2P02585 160 aa1.41□□□□□ -2.18
SMCHD1-209ENST00000583441 IFNA16P05015 189 aa1.41□□□□□ -2.18
SMCHD1-209ENST00000583441 CCL5P13501 91 aa1.41□□□□□ -2.18
SMCHD1-209ENST00000583441 NFYAP23511 347 aaPredicted RBP1.41□□□□□ -2.18
SMCHD1-209ENST00000583441 RPL28P46779 137 aaKnown RBP1.41□□□□□ -2.18
SMCHD1-209ENST00000583441 LRRC28Q86X40 367 aaPredicted RBP1.41□□□□□ -2.18
SMCHD1-209ENST00000583441 OR1M1Q8NGA1 313 aa1.41□□□□□ -2.18
SMCHD1-209ENST00000583441 ACOT12Q8WYK0 555 aa1.41□□□□□ -2.18
SMCHD1-209ENST00000583441 ANKRD7Q92527 254 aa1.41□□□□□ -2.18
SMCHD1-209ENST00000583441 SLC35B4Q969S0 331 aa1.41□□□□□ -2.18
SMCHD1-209ENST00000583441 DENND4BO75064 1496 aaPredicted RBP1.41□□□□□ -2.18
SMCHD1-209ENST00000583441 IRGMA1A4Y4 181 aa1.4□□□□□ -2.19
SMCHD1-209ENST00000583441 HMSDA8MTL9 139 aa1.4□□□□□ -2.19
SMCHD1-209ENST00000583441 EEF1E1-BLOC1S5C9J1V9 151 aa1.4□□□□□ -2.19
SMCHD1-209ENST00000583441 NAPSAO96009 420 aa1.4□□□□□ -2.19
SMCHD1-209ENST00000583441 C1QCP02747 245 aa1.4□□□□□ -2.19
SMCHD1-209ENST00000583441 TFPTP0C1Z6 253 aa1.4□□□□□ -2.19
SMCHD1-209ENST00000583441 CD79AP11912 226 aa1.4□□□□□ -2.19
SMCHD1-209ENST00000583441 SPCS3P61009 180 aa1.4□□□□□ -2.19
SMCHD1-209ENST00000583441 PSME3P61289 254 aa1.4□□□□□ -2.19
SMCHD1-209ENST00000583441 RPL18Q07020 188 aaKnown RBP1.4□□□□□ -2.19
SMCHD1-209ENST00000583441 SLC38A11Q08AI6 406 aa1.4□□□□□ -2.19
SMCHD1-209ENST00000583441 GRK1Q15835 563 aa1.4□□□□□ -2.19
SMCHD1-209ENST00000583441 DCXRQ7Z4W1 244 aa1.4□□□□□ -2.19
SMCHD1-209ENST00000583441 C20orf196Q8IYI0 205 aa1.4□□□□□ -2.19
SMCHD1-209ENST00000583441 TMEM86AQ8N2M4 240 aa1.4□□□□□ -2.19
SMCHD1-209ENST00000583441 ERMAPQ96PL5 475 aaPredicted RBP1.4□□□□□ -2.19
SMCHD1-209ENST00000583441 PAQR5Q9NXK6 330 aaPredicted RBP1.4□□□□□ -2.19
SMCHD1-209ENST00000583441 VPS29Q9UBQ0 182 aa1.4□□□□□ -2.19
SMCHD1-209ENST00000583441 NAT8Q9UHE5 227 aa1.4□□□□□ -2.19
SMCHD1-209ENST00000583441 TRPM6Q9BX84 2022 aa1.4□□□□□ -2.19
SMCHD1-209ENST00000583441 REREQ9P2R6 1566 aa1.39□□□□□ -2.19
SMCHD1-209ENST00000583441 TRBV20OR9-2A0A075B6H5 130 aa1.39□□□□□ -2.19
SMCHD1-209ENST00000583441 TRGV2A0A075B6R0 118 aa1.39□□□□□ -2.19
SMCHD1-209ENST00000583441 PSMD12O00232 456 aaPredicted RBP1.39□□□□□ -2.19
SMCHD1-209ENST00000583441 SLC22A1O15245 554 aa1.39□□□□□ -2.19
SMCHD1-209ENST00000583441 SERPINA6P08185 405 aa1.39□□□□□ -2.19
SMCHD1-209ENST00000583441 SULT1A3P0DMM9 295 aa1.39□□□□□ -2.19
SMCHD1-209ENST00000583441 SULT1A4P0DMN0 295 aa1.39□□□□□ -2.19
SMCHD1-209ENST00000583441 OMPP47874 163 aa1.39□□□□□ -2.19
SMCHD1-209ENST00000583441 CCL20P78556 96 aa1.39□□□□□ -2.19
SMCHD1-209ENST00000583441 IFITM2Q01629 132 aa1.39□□□□□ -2.19
SMCHD1-209ENST00000583441 IBA57Q5T440 356 aaKnown RBP1.39□□□□□ -2.19
SMCHD1-209ENST00000583441 C8orf74Q6P047 294 aa1.39□□□□□ -2.19
SMCHD1-209ENST00000583441 COA5Q86WW8 74 aa1.39□□□□□ -2.19
SMCHD1-209ENST00000583441 ZNF676Q8N7Q3 588 aa1.39□□□□□ -2.19
SMCHD1-209ENST00000583441 OR8J2Q8NGG1 315 aa1.39□□□□□ -2.19
SMCHD1-209ENST00000583441 EFCAB1Q9HAE3 211 aa1.39□□□□□ -2.19
SMCHD1-209ENST00000583441 FUT9Q9Y231 359 aa1.39□□□□□ -2.19
SMCHD1-209ENST00000583441 INMT-MINDY4F8WBC2 141 aa1.38□□□□□ -2.19
SMCHD1-209ENST00000583441 E2F6O75461 281 aa1.38□□□□□ -2.19
SMCHD1-209ENST00000583441 RPP14O95059 124 aaKnown RBP1.38□□□□□ -2.19
SMCHD1-209ENST00000583441 PRM2P04554 102 aa1.38□□□□□ -2.19
SMCHD1-209ENST00000583441 FXYD2P54710 66 aa1.38□□□□□ -2.19
SMCHD1-209ENST00000583441 ITGB3BPQ13352 177 aaPredicted RBP1.38□□□□□ -2.19
SMCHD1-209ENST00000583441 NDUFA5Q16718 116 aa1.38□□□□□ -2.19
SMCHD1-209ENST00000583441 GUK1Q16774 197 aa1.38□□□□□ -2.19
SMCHD1-209ENST00000583441 SYPL2Q5VXT5 272 aa1.38□□□□□ -2.19
SMCHD1-209ENST00000583441 LRRC25Q8N386 305 aaPredicted RBP1.38□□□□□ -2.19
SMCHD1-209ENST00000583441 DEFB119Q8N690 84 aa1.38□□□□□ -2.19
SMCHD1-209ENST00000583441 OR51D1Q8NGF3 324 aa1.38□□□□□ -2.19
SMCHD1-209ENST00000583441 SPACA4Q8TDM5 124 aa1.38□□□□□ -2.19
SMCHD1-209ENST00000583441 DCUN1D1Q96GG9 259 aa1.38□□□□□ -2.19
SMCHD1-209ENST00000583441 CST9LQ9H4G1 147 aa1.38□□□□□ -2.19
SMCHD1-209ENST00000583441 PRTFDC1Q9NRG1 225 aa1.38□□□□□ -2.19
SMCHD1-209ENST00000583441 IL36BQ9NZH7 164 aa1.38□□□□□ -2.19
SMCHD1-209ENST00000583441 TIMM22Q9Y584 194 aa1.38□□□□□ -2.19
SMCHD1-209ENST00000583441 DSCAMO60469 2012 aa1.38□□□□□ -2.19
SMCHD1-209ENST00000583441 SLX4Q8IY92 1834 aa1.38□□□□□ -2.19
SMCHD1-209ENST00000583441 CHD5Q8TDI0 1954 aa1.38□□□□□ -2.19
SMCHD1-209ENST00000583441 SNAPC4Q5SXM2 1469 aa1.37□□□□□ -2.19
SMCHD1-209ENST00000583441 PLXNA3P51805 1871 aa1.37□□□□□ -2.19
SMCHD1-209ENST00000583441 DISP1Q96F81 1524 aa1.37□□□□□ -2.19
SMCHD1-209ENST00000583441 ATG2BQ96BY7 2078 aa1.37□□□□□ -2.19
SMCHD1-209ENST00000583441 A0A0D9SEW6 157 aa1.37□□□□□ -2.19
SMCHD1-209ENST00000583441 A0A0J9YY10 115 aa1.37□□□□□ -2.19
SMCHD1-209ENST00000583441 A0A1B0GX78 115 aa1.37□□□□□ -2.19
SMCHD1-209ENST00000583441 MEIS3P1A6NDR6 274 aa1.37□□□□□ -2.19
SMCHD1-209ENST00000583441 OR51F1A6NGY5 319 aa1.37□□□□□ -2.19
SMCHD1-209ENST00000583441 FABP5P3A8MUU1 101 aa1.37□□□□□ -2.19
SMCHD1-209ENST00000583441 PGLYRP1O75594 196 aaPredicted RBP1.37□□□□□ -2.19
SMCHD1-209ENST00000583441 IGHV3-7P01780 117 aa1.37□□□□□ -2.19
SMCHD1-209ENST00000583441 HLA-DMBP28068 263 aa1.37□□□□□ -2.19
SMCHD1-209ENST00000583441 AKR1C3P42330 323 aa1.37□□□□□ -2.19
SMCHD1-209ENST00000583441 EVX1P49640 407 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms