RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 ERVK-16P61578 105 aa11.17□□□□□ -0.62
MKS1-207ENST00000578789 EGFEM1PQ0D2K5 195 aa11.17□□□□□ -0.62
MKS1-207ENST00000578789 SLC25A42Q86VD7 318 aa11.17□□□□□ -0.62
MKS1-207ENST00000578789 DMBX1Q8NFW5 382 aa11.17□□□□□ -0.62
MKS1-207ENST00000578789 TERB2Q8NHR7 220 aa11.17□□□□□ -0.62
MKS1-207ENST00000578789 IGHV4OR15-8A0A075B7B6 117 aa11.16□□□□□ -0.62
MKS1-207ENST00000578789 A0A087WW49 117 aa11.16□□□□□ -0.62
MKS1-207ENST00000578789 TRBV9A0A0B4J1U6 114 aa11.16□□□□□ -0.62
MKS1-207ENST00000578789 TRAV3A0A0B4J244 114 aa11.16□□□□□ -0.62
MKS1-207ENST00000578789 C13orf42A0A1B0GVH6 325 aa11.16□□□□□ -0.62
MKS1-207ENST00000578789 ANKRD20A5PA0PJZ0 165 aa11.16□□□□□ -0.62
MKS1-207ENST00000578789 HMX3A6NHT5 357 aa11.16□□□□□ -0.62
MKS1-207ENST00000578789 CGB1A6NKQ9 187 aa11.16□□□□□ -0.62
MKS1-207ENST00000578789 NPIPB5A8MRT5 1133 aa11.16□□□□□ -0.62
MKS1-207ENST00000578789 LINC01619G3V211 115 aa11.16□□□□□ -0.62
MKS1-207ENST00000578789 HSPB1P04792 205 aaKnown RBP11.16□□□□□ -0.62
MKS1-207ENST00000578789 AKAIN1P0CW23 69 aa11.16□□□□□ -0.62
MKS1-207ENST00000578789 PGAM2P15259 253 aa11.16□□□□□ -0.62
MKS1-207ENST00000578789 FAAP20Q6NZ36 180 aa11.16□□□□□ -0.62
MKS1-207ENST00000578789 REC114Q7Z4M0 266 aa11.16□□□□□ -0.62
MKS1-207ENST00000578789 OR4C16Q8NGL9 310 aa11.16□□□□□ -0.62
MKS1-207ENST00000578789 MRGPRFQ96AM1 343 aa11.16□□□□□ -0.62
MKS1-207ENST00000578789 USMG5Q96IX5 58 aa11.16□□□□□ -0.62
MKS1-207ENST00000578789 ZNF257Q9Y2Q1 563 aa11.16□□□□□ -0.62
MKS1-207ENST00000578789 V9GYH0 126 aa11.16□□□□□ -0.62
MKS1-207ENST00000578789 FAM223BA6NKX1 122 aa11.15□□□□□ -0.62
MKS1-207ENST00000578789 DISC1C4P0D8 188 aa11.15□□□□□ -0.62
MKS1-207ENST00000578789 RBMXL2O75526 392 aaKnown RBP11.15□□□□□ -0.62
MKS1-207ENST00000578789 CRYGCP07315 174 aa11.15□□□□□ -0.62
MKS1-207ENST00000578789 MYOD1P15172 320 aa11.15□□□□□ -0.62
MKS1-207ENST00000578789 ECI1P42126 302 aa11.15□□□□□ -0.62
MKS1-207ENST00000578789 PIGPP57054 158 aa11.15□□□□□ -0.62
MKS1-207ENST00000578789 OR2B8PP59922 312 aa11.15□□□□□ -0.62
MKS1-207ENST00000578789 ZNF45Q02386 682 aa11.15□□□□□ -0.62
MKS1-207ENST00000578789 KLK9Q2XQG4 91 aa11.15□□□□□ -0.62
MKS1-207ENST00000578789 SCGB2B2Q4G0G5 96 aa11.15□□□□□ -0.62
MKS1-207ENST00000578789 THOC7Q6I9Y2 204 aaKnown RBP11.15□□□□□ -0.62
MKS1-207ENST00000578789 CCDC190Q86UF4 302 aa11.15□□□□□ -0.62
MKS1-207ENST00000578789 FAM223AQ8IWN6 122 aa11.15□□□□□ -0.62
MKS1-207ENST00000578789 OR13C8Q8NGS7 320 aa11.15□□□□□ -0.62
MKS1-207ENST00000578789 ZFAND1Q8TCF1 268 aa11.15□□□□□ -0.62
MKS1-207ENST00000578789 DPF1Q92782 380 aa11.15□□□□□ -0.62
MKS1-207ENST00000578789 FYTTD1Q96QD9 318 aaKnown RBP11.15□□□□□ -0.62
MKS1-207ENST00000578789 SRSF8Q9BRL6 282 aaKnown RBP11.15□□□□□ -0.62
MKS1-207ENST00000578789 AURKAIP1Q9NWT8 199 aaPredicted RBP11.15□□□□□ -0.62
MKS1-207ENST00000578789 KLK9Q9UKQ9 250 aa11.15□□□□□ -0.62
MKS1-207ENST00000578789 H0Y980 276 aa11.14□□□□□ -0.63
MKS1-207ENST00000578789 IGKV1-39P01597 117 aa11.14□□□□□ -0.63
MKS1-207ENST00000578789 IGKV1D-39P04432 117 aa11.14□□□□□ -0.63
MKS1-207ENST00000578789 CTSDP07339 412 aaPredicted RBP11.14□□□□□ -0.63
MKS1-207ENST00000578789 AREGP15514 252 aa11.14□□□□□ -0.63
MKS1-207ENST00000578789 PI3P19957 117 aa11.14□□□□□ -0.63
MKS1-207ENST00000578789 PSMB6P28072 239 aa11.14□□□□□ -0.63
MKS1-207ENST00000578789 S100A5P33763 92 aa11.14□□□□□ -0.63
MKS1-207ENST00000578789 G6PCP35575 357 aa11.14□□□□□ -0.63
MKS1-207ENST00000578789 SLURP1P55000 103 aa11.14□□□□□ -0.63
MKS1-207ENST00000578789 DEFA5Q01523 94 aa11.14□□□□□ -0.63
MKS1-207ENST00000578789 SURF2Q15527 256 aaPredicted RBP11.14□□□□□ -0.63
MKS1-207ENST00000578789 C9orf66Q5T8R8 295 aa11.14□□□□□ -0.63
MKS1-207ENST00000578789 ZNF343Q6P1L6 599 aa11.14□□□□□ -0.63
MKS1-207ENST00000578789 MARCH1Q8TCQ1 289 aa11.14□□□□□ -0.63
MKS1-207ENST00000578789 DCUN1D4Q92564 292 aa11.14□□□□□ -0.63
MKS1-207ENST00000578789 TRIM63Q969Q1 353 aa11.14□□□□□ -0.63
MKS1-207ENST00000578789 COMMD5Q9GZQ3 224 aa11.14□□□□□ -0.63
MKS1-207ENST00000578789 SLC2A8Q9NY64 477 aa11.14□□□□□ -0.63
MKS1-207ENST00000578789 IGLC7A0M8Q6 106 aa11.13□□□□□ -0.63
MKS1-207ENST00000578789 DPPA5A6NC42 116 aa11.13□□□□□ -0.63
MKS1-207ENST00000578789 KRASP01116 189 aa11.13□□□□□ -0.63
MKS1-207ENST00000578789 PRH1P02810 166 aa11.13□□□□□ -0.63
MKS1-207ENST00000578789 PRB2P02812 416 aaPredicted RBP11.13□□□□□ -0.63
MKS1-207ENST00000578789 RPA2P15927 270 aa11.13□□□□□ -0.63
MKS1-207ENST00000578789 CTRB1P17538 263 aa11.13□□□□□ -0.63
MKS1-207ENST00000578789 HOXD3P31249 432 aaPredicted RBP11.13□□□□□ -0.63
MKS1-207ENST00000578789 KRTAP10-11P60412 298 aa11.13□□□□□ -0.63
MKS1-207ENST00000578789 RHOGP84095 191 aa11.13□□□□□ -0.63
MKS1-207ENST00000578789 ZNF79Q15937 498 aa11.13□□□□□ -0.63
MKS1-207ENST00000578789 CTRB2Q6GPI1 263 aa11.13□□□□□ -0.63
MKS1-207ENST00000578789 CCDC71LQ8N9Z2 235 aa11.13□□□□□ -0.63
MKS1-207ENST00000578789 NECAP1Q8NC96 275 aa11.13□□□□□ -0.63
MKS1-207ENST00000578789 DLX4Q92988 240 aaPredicted RBP11.13□□□□□ -0.63
MKS1-207ENST00000578789 SEC22AQ96IW7 307 aa11.13□□□□□ -0.63
MKS1-207ENST00000578789 TSC22D3Q99576 134 aa11.13□□□□□ -0.63
MKS1-207ENST00000578789 PRRT1Q99946 306 aa11.13□□□□□ -0.63
MKS1-207ENST00000578789 QTRT1Q9BXR0 403 aaKnown RBP11.13□□□□□ -0.63
MKS1-207ENST00000578789 RANGRFQ9HD47 186 aaPredicted RBP11.13□□□□□ -0.63
MKS1-207ENST00000578789 AKIP1Q9NQ31 210 aa11.13□□□□□ -0.63
MKS1-207ENST00000578789 NDUFA13Q9P0J0 144 aa11.13□□□□□ -0.63
MKS1-207ENST00000578789 SEC14L6B5MCN3 397 aa11.12□□□□□ -0.63
MKS1-207ENST00000578789 OVOL1O14753 267 aa11.12□□□□□ -0.63
MKS1-207ENST00000578789 ZP3P21754 424 aa11.12□□□□□ -0.63
MKS1-207ENST00000578789 ETV6P41212 452 aa11.12□□□□□ -0.63
MKS1-207ENST00000578789 HSD17B13Q7Z5P4 300 aaPredicted RBP11.12□□□□□ -0.63
MKS1-207ENST00000578789 FANCD2OSQ96PS1 177 aa11.12□□□□□ -0.63
MKS1-207ENST00000578789 TP53RKQ96S44 253 aa11.12□□□□□ -0.63
MKS1-207ENST00000578789 THAP7Q9BT49 309 aaPredicted RBP11.12□□□□□ -0.63
MKS1-207ENST00000578789 PLA2G2EQ9NZK7 142 aa11.12□□□□□ -0.63
MKS1-207ENST00000578789 COPZ2Q9P299 210 aa11.12□□□□□ -0.63
MKS1-207ENST00000578789 PRNDQ9UKY0 176 aa11.12□□□□□ -0.63
MKS1-207ENST00000578789 PRKDCP78527 4128 aaKnown RBP11.11□□□□□ -0.63
MKS1-207ENST00000578789 C3orf85A0A1B0GTC6 90 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms