RNA–Protein interactions for RNA: ENST00000577393.1

PPP4R1-204, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-204ENST00000577393 SLC38A6Q8IZM9 456 aa20.29■□□□□ 0.84
PPP4R1-204ENST00000577393 DIRAS2Q96HU8 199 aa20.29■□□□□ 0.84
PPP4R1-204ENST00000577393 CGB1A6NKQ9 187 aa20.28■□□□□ 0.84
PPP4R1-204ENST00000577393 FAM223BA6NKX1 122 aa20.28■□□□□ 0.84
PPP4R1-204ENST00000577393 NPIPB5A8MRT5 1133 aa20.28■□□□□ 0.84
PPP4R1-204ENST00000577393 AREGP15514 252 aa20.28■□□□□ 0.84
PPP4R1-204ENST00000577393 TBPP20226 339 aa20.28■□□□□ 0.84
PPP4R1-204ENST00000577393 ZP3P21754 424 aa20.28■□□□□ 0.84
PPP4R1-204ENST00000577393 ECI1P42126 302 aa20.28■□□□□ 0.84
PPP4R1-204ENST00000577393 ERVK-16P61578 105 aa20.28■□□□□ 0.84
PPP4R1-204ENST00000577393 DEFB121Q5J5C9 76 aa20.28■□□□□ 0.84
PPP4R1-204ENST00000577393 C19orf35Q6ZS72 473 aa20.28■□□□□ 0.84
PPP4R1-204ENST00000577393 FAM223AQ8IWN6 122 aa20.28■□□□□ 0.84
PPP4R1-204ENST00000577393 TMEM229BQ8NBD8 167 aa20.28■□□□□ 0.84
PPP4R1-204ENST00000577393 SLIRPQ9GZT3 109 aaKnown RBP20.28■□□□□ 0.84
PPP4R1-204ENST00000577393 C6orf62Q9GZU0 229 aaPredicted RBP20.28■□□□□ 0.84
PPP4R1-204ENST00000577393 PEF1Q9UBV8 284 aaKnown RBP20.28■□□□□ 0.84
PPP4R1-204ENST00000577393 MARCH11A6NNE9 402 aa20.27■□□□□ 0.84
PPP4R1-204ENST00000577393 TRBV12-3P01733 135 aa20.27■□□□□ 0.84
PPP4R1-204ENST00000577393 OR2B8PP59922 312 aa20.27■□□□□ 0.84
PPP4R1-204ENST00000577393 MRPS10P82664 201 aaKnown RBP20.27■□□□□ 0.84
PPP4R1-204ENST00000577393 ATP5G2Q06055 141 aa20.27■□□□□ 0.84
PPP4R1-204ENST00000577393 ACSM6Q6P461 480 aa20.27■□□□□ 0.84
PPP4R1-204ENST00000577393 TBC1D26Q86UD7 250 aa20.27■□□□□ 0.84
PPP4R1-204ENST00000577393 ZNF429Q86V71 674 aa20.27■□□□□ 0.84
PPP4R1-204ENST00000577393 LHFPL1Q86WI0 220 aa20.27■□□□□ 0.84
PPP4R1-204ENST00000577393 ARRDC1Q8N5I2 433 aa20.27■□□□□ 0.84
PPP4R1-204ENST00000577393 OR4D10Q8NGI6 311 aa20.27■□□□□ 0.84
PPP4R1-204ENST00000577393 SAP30O75446 220 aa20.26■□□□□ 0.83
PPP4R1-204ENST00000577393 OR2J3O76001 311 aa20.26■□□□□ 0.83
PPP4R1-204ENST00000577393 KRASP01116 189 aa20.26■□□□□ 0.83
PPP4R1-204ENST00000577393 CD74P04233 296 aa20.26■□□□□ 0.83
PPP4R1-204ENST00000577393 CRYGCP07315 174 aa20.26■□□□□ 0.83
PPP4R1-204ENST00000577393 PSMB6P28072 239 aa20.26■□□□□ 0.83
PPP4R1-204ENST00000577393 TAS2R19P59542 299 aa20.26■□□□□ 0.83
PPP4R1-204ENST00000577393 IL18Q14116 193 aa20.26■□□□□ 0.83
PPP4R1-204ENST00000577393 NECAP1Q8NC96 275 aa20.26■□□□□ 0.83
PPP4R1-204ENST00000577393 COMMD5Q9GZQ3 224 aa20.26■□□□□ 0.83
PPP4R1-204ENST00000577393 FGF2P09038 288 aa20.25■□□□□ 0.83
PPP4R1-204ENST00000577393 PGAM2P15259 253 aa20.25■□□□□ 0.83
PPP4R1-204ENST00000577393 G6PCP35575 357 aa20.25■□□□□ 0.83
PPP4R1-204ENST00000577393 SSBP1Q04837 148 aaKnown RBP20.25■□□□□ 0.83
PPP4R1-204ENST00000577393 EXOSC2Q13868 293 aaKnown RBP20.25■□□□□ 0.83
PPP4R1-204ENST00000577393 SMIM4Q8WVI0 70 aa20.25■□□□□ 0.83
PPP4R1-204ENST00000577393 CTDSPLO15194 276 aa20.24■□□□□ 0.83
PPP4R1-204ENST00000577393 RAB3DO95716 219 aa20.24■□□□□ 0.83
PPP4R1-204ENST00000577393 REG1AP05451 166 aa20.24■□□□□ 0.83
PPP4R1-204ENST00000577393 CTRB1P17538 263 aa20.24■□□□□ 0.83
PPP4R1-204ENST00000577393 KLF5Q13887 457 aaPredicted RBP20.24■□□□□ 0.83
PPP4R1-204ENST00000577393 CTRB2Q6GPI1 263 aa20.24■□□□□ 0.83
PPP4R1-204ENST00000577393 STEAP1BQ6NZ63 245 aa20.24■□□□□ 0.83
PPP4R1-204ENST00000577393 PRR25Q96S07 402 aa20.24■□□□□ 0.83
PPP4R1-204ENST00000577393 FAM212BQ9NTI7 297 aaPredicted RBP20.24■□□□□ 0.83
PPP4R1-204ENST00000577393 RABL2AQ9UBK7 228 aaPredicted RBP20.24■□□□□ 0.83
PPP4R1-204ENST00000577393 RABL2BQ9UNT1 228 aa20.24■□□□□ 0.83
PPP4R1-204ENST00000577393 PI3P19957 117 aa20.23■□□□□ 0.83
PPP4R1-204ENST00000577393 C15orf32Q32M92 178 aa20.23■□□□□ 0.83
PPP4R1-204ENST00000577393 CADM3Q8N126 398 aa20.23■□□□□ 0.83
PPP4R1-204ENST00000577393 MCFD2Q8NI22 146 aa20.23■□□□□ 0.83
PPP4R1-204ENST00000577393 FANCD2OSQ96PS1 177 aa20.23■□□□□ 0.83
PPP4R1-204ENST00000577393 NXF2Q9GZY0 626 aaKnown RBP20.23■□□□□ 0.83
PPP4R1-204ENST00000577393 FBXL7Q9UJT9 491 aa20.23■□□□□ 0.83
PPP4R1-204ENST00000577393 CCDC160A6NGH7 325 aa20.22■□□□□ 0.83
PPP4R1-204ENST00000577393 DHFRP00374 187 aa20.22■□□□□ 0.83
PPP4R1-204ENST00000577393 RND3P61587 244 aa20.22■□□□□ 0.83
PPP4R1-204ENST00000577393 TERB2Q8NHR7 220 aa20.22■□□□□ 0.83
PPP4R1-204ENST00000577393 ZNF486Q96H40 463 aaPredicted RBP20.22■□□□□ 0.83
PPP4R1-204ENST00000577393 OR4C12Q96R67 309 aa20.22■□□□□ 0.83
PPP4R1-204ENST00000577393 QTRT1Q9BXR0 403 aaKnown RBP20.22■□□□□ 0.83
PPP4R1-204ENST00000577393 ZNF256Q9Y2P7 627 aaPredicted RBP20.22■□□□□ 0.83
PPP4R1-204ENST00000577393 NSG2Q9Y328 171 aa20.22■□□□□ 0.83
PPP4R1-204ENST00000577393 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP20.21■□□□□ 0.83
PPP4R1-204ENST00000577393 TEX50A0A1B0GTY4 177 aa20.21■□□□□ 0.83
PPP4R1-204ENST00000577393 IGLC7A0M8Q6 106 aa20.21■□□□□ 0.83
PPP4R1-204ENST00000577393 TNFSF8P32971 234 aa20.21■□□□□ 0.83
PPP4R1-204ENST00000577393 PPP5CP53041 499 aa20.21■□□□□ 0.83
PPP4R1-204ENST00000577393 SYNJ2BPP57105 145 aa20.21■□□□□ 0.83
PPP4R1-204ENST00000577393 KLK9Q2XQG4 91 aa20.21■□□□□ 0.83
PPP4R1-204ENST00000577393 SCGB2B2Q4G0G5 96 aa20.21■□□□□ 0.83
PPP4R1-204ENST00000577393 SRSF8Q9BRL6 282 aaKnown RBP20.21■□□□□ 0.83
PPP4R1-204ENST00000577393 ELOVL1Q9BW60 279 aa20.21■□□□□ 0.83
PPP4R1-204ENST00000577393 KLK9Q9UKQ9 250 aa20.21■□□□□ 0.83
PPP4R1-204ENST00000577393 SORL1Q92673 2214 aa20.21■□□□□ 0.83
PPP4R1-204ENST00000577393 SNAPC5O75971 98 aa20.2■□□□□ 0.82
PPP4R1-204ENST00000577393 NDUFB8O95169 186 aa20.2■□□□□ 0.82
PPP4R1-204ENST00000577393 DEFA4P12838 97 aa20.2■□□□□ 0.82
PPP4R1-204ENST00000577393 PTBP1P26599 531 aaKnown RBP eCLIP20.2■□□□□ 0.82
PPP4R1-204ENST00000577393 PIGPP57054 158 aa20.2■□□□□ 0.82
PPP4R1-204ENST00000577393 RPEL1Q2QD12 228 aa20.2■□□□□ 0.82
PPP4R1-204ENST00000577393 FAAP20Q6NZ36 180 aa20.2■□□□□ 0.82
PPP4R1-204ENST00000577393 OR10W1Q8NGF6 305 aa20.2■□□□□ 0.82
PPP4R1-204ENST00000577393 OR1L8Q8NGR8 309 aa20.2■□□□□ 0.82
PPP4R1-204ENST00000577393 BMPR1BO00238 502 aa20.19■□□□□ 0.82
PPP4R1-204ENST00000577393 IGKV1-39P01597 117 aa20.19■□□□□ 0.82
PPP4R1-204ENST00000577393 IGKV1D-39P04432 117 aa20.19■□□□□ 0.82
PPP4R1-204ENST00000577393 TRAPPC2P0DI81 140 aa20.19■□□□□ 0.82
PPP4R1-204ENST00000577393 TRAPPC2BP0DI82 140 aa20.19■□□□□ 0.82
PPP4R1-204ENST00000577393 HIST1H1BP16401 226 aaKnown RBP20.19■□□□□ 0.82
PPP4R1-204ENST00000577393 MEF2DQ14814 521 aa20.19■□□□□ 0.82
PPP4R1-204ENST00000577393 SEC22AQ96IW7 307 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms