RNA–Protein interactions for RNA: ENST00000577390.5

CDH8-203, Transcript of cadherin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH8, Length 9,721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-203ENST00000577390 TNFSF13O75888 250 aa7.68□□□□□ -1.18
CDH8-203ENST00000577390 EGR3Q06889 387 aa7.68□□□□□ -1.18
CDH8-203ENST00000577390 OR13A1Q8NGR1 328 aa7.68□□□□□ -1.18
CDH8-203ENST00000577390 SLC25A28Q96A46 364 aa7.68□□□□□ -1.18
CDH8-203ENST00000577390 TEX48A0A1B0GUV7 120 aa7.68□□□□□ -1.18
CDH8-203ENST00000577390 VWC2LB2RUY7 222 aa7.68□□□□□ -1.18
CDH8-203ENST00000577390 HMGN4O00479 90 aa7.68□□□□□ -1.18
CDH8-203ENST00000577390 LINC00158P58513 81 aa7.68□□□□□ -1.18
CDH8-203ENST00000577390 MEF2CQ06413 473 aaPredicted RBP7.68□□□□□ -1.18
CDH8-203ENST00000577390 RPL18Q07020 188 aaKnown RBP7.68□□□□□ -1.18
CDH8-203ENST00000577390 IGHV3OR16-13A0A075B7E8 117 aa7.68□□□□□ -1.18
CDH8-203ENST00000577390 IGHV3-74A0A0B4J1X5 117 aa7.68□□□□□ -1.18
CDH8-203ENST00000577390 SPINT1O43278 529 aa7.68□□□□□ -1.18
CDH8-203ENST00000577390 RAMP1O60894 148 aa7.68□□□□□ -1.18
CDH8-203ENST00000577390 ERVK11-1P61568 191 aa7.68□□□□□ -1.18
CDH8-203ENST00000577390 PRB3Q04118 309 aaPredicted RBP7.68□□□□□ -1.18
CDH8-203ENST00000577390 ANKRD37Q7Z713 158 aa7.68□□□□□ -1.18
CDH8-203ENST00000577390 A0A1W2PPE3 182 aa7.68□□□□□ -1.18
CDH8-203ENST00000577390 SAP30O75446 220 aa7.68□□□□□ -1.18
CDH8-203ENST00000577390 MFAP2P55001 183 aa7.68□□□□□ -1.18
CDH8-203ENST00000577390 ACVR1Q04771 509 aa7.68□□□□□ -1.18
CDH8-203ENST00000577390 LSM10Q969L4 123 aaKnown RBP7.68□□□□□ -1.18
CDH8-203ENST00000577390 ZMAT4Q9H898 229 aa7.68□□□□□ -1.18
CDH8-203ENST00000577390 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.67□□□□□ -1.18
CDH8-203ENST00000577390 A0A0U1RRA0 63 aa7.67□□□□□ -1.18
CDH8-203ENST00000577390 KLF4O43474 513 aa7.67□□□□□ -1.18
CDH8-203ENST00000577390 RAB40CQ96S21 281 aa7.67□□□□□ -1.18
CDH8-203ENST00000577390 DKK4Q9UBT3 224 aa7.67□□□□□ -1.18
CDH8-203ENST00000577390 J3QR06 171 aa7.67□□□□□ -1.18
CDH8-203ENST00000577390 SSTR5P35346 364 aa7.67□□□□□ -1.18
CDH8-203ENST00000577390 VSTM2LQ96N03 204 aa7.67□□□□□ -1.18
CDH8-203ENST00000577390 ADAMTSL4Q6UY14 1074 aa7.67□□□□□ -1.18
CDH8-203ENST00000577390 ABHD12Q8N2K0 398 aa7.67□□□□□ -1.18
CDH8-203ENST00000577390 LOC105371242A0A075B767 164 aa7.67□□□□□ -1.18
CDH8-203ENST00000577390 PCOLCEQ15113 449 aa7.67□□□□□ -1.18
CDH8-203ENST00000577390 FCRL6Q6DN72 434 aa7.67□□□□□ -1.18
CDH8-203ENST00000577390 SLC25A34Q6PIV7 304 aa7.67□□□□□ -1.18
CDH8-203ENST00000577390 CITED1Q99966 193 aa7.67□□□□□ -1.18
CDH8-203ENST00000577390 FAM206AQ9NX38 181 aa7.67□□□□□ -1.18
CDH8-203ENST00000577390 H0YL77 283 aa7.67□□□□□ -1.18
CDH8-203ENST00000577390 HYPMO75409 117 aa7.67□□□□□ -1.18
CDH8-203ENST00000577390 GZMMP51124 257 aa7.67□□□□□ -1.18
CDH8-203ENST00000577390 HS3ST3B1Q9Y662 390 aa7.67□□□□□ -1.18
CDH8-203ENST00000577390 SIRT4Q9Y6E7 314 aaPredicted RBP7.67□□□□□ -1.18
CDH8-203ENST00000577390 A0A1B0GW15 77 aa7.67□□□□□ -1.18
CDH8-203ENST00000577390 LINC01553A4QN01 128 aa7.67□□□□□ -1.18
CDH8-203ENST00000577390 CEACAM18A8MTB9 384 aa7.67□□□□□ -1.18
CDH8-203ENST00000577390 CDIPTO14735 213 aa7.67□□□□□ -1.18
CDH8-203ENST00000577390 CA11O75493 328 aa7.67□□□□□ -1.18
CDH8-203ENST00000577390 SMIM13P0DJ93 91 aa7.67□□□□□ -1.18
CDH8-203ENST00000577390 C20orf144Q9BQM9 153 aa7.67□□□□□ -1.18
CDH8-203ENST00000577390 TRAV41A0A0B4J266 112 aa7.67□□□□□ -1.18
CDH8-203ENST00000577390 ADARB2-AS1A8MUL3 147 aa7.67□□□□□ -1.18
CDH8-203ENST00000577390 IGHV3-23P01764 117 aa7.67□□□□□ -1.18
CDH8-203ENST00000577390 MAGEA5P43359 124 aa7.67□□□□□ -1.18
CDH8-203ENST00000577390 THAP8Q8NA92 274 aa7.67□□□□□ -1.18
CDH8-203ENST00000577390 MRPS18AQ9NVS2 196 aaKnown RBP7.67□□□□□ -1.18
CDH8-203ENST00000577390 PRNDQ9UKY0 176 aa7.67□□□□□ -1.18
CDH8-203ENST00000577390 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.67□□□□□ -1.18
CDH8-203ENST00000577390 F8VVB4 439 aa7.67□□□□□ -1.18
CDH8-203ENST00000577390 F8VWA3 439 aa7.67□□□□□ -1.18
CDH8-203ENST00000577390 DYNLT3P51808 116 aa7.67□□□□□ -1.18
CDH8-203ENST00000577390 LCN2P80188 198 aa7.67□□□□□ -1.18
CDH8-203ENST00000577390 DUSP5Q16690 384 aa7.67□□□□□ -1.18
CDH8-203ENST00000577390 GPR146Q96CH1 333 aa7.67□□□□□ -1.18
CDH8-203ENST00000577390 PGLYRP4Q96LB8 373 aa7.67□□□□□ -1.18
CDH8-203ENST00000577390 ANAPC13Q9BS18 74 aa7.67□□□□□ -1.18
CDH8-203ENST00000577390 C3orf85A0A1B0GTC6 90 aa7.66□□□□□ -1.18
CDH8-203ENST00000577390 EDIL3O43854 480 aa7.66□□□□□ -1.18
CDH8-203ENST00000577390 MST1P26927 711 aa7.66□□□□□ -1.18
CDH8-203ENST00000577390 RPS4XP62701 263 aaKnown RBP7.66□□□□□ -1.18
CDH8-203ENST00000577390 WDFY1Q8IWB7 410 aa7.66□□□□□ -1.18
CDH8-203ENST00000577390 PRRC2AP48634 2157 aaKnown RBP7.66□□□□□ -1.18
CDH8-203ENST00000577390 TOMM40O96008 361 aa7.66□□□□□ -1.18
CDH8-203ENST00000577390 OTX1P32242 354 aaPredicted RBP7.66□□□□□ -1.18
CDH8-203ENST00000577390 H1FOOQ8IZA3 346 aaPredicted RBP7.66□□□□□ -1.18
CDH8-203ENST00000577390 NRXN2Q9P2S2 1712 aa7.66□□□□□ -1.18
CDH8-203ENST00000577390 TRBV20OR9-2A0A075B6H5 130 aa7.66□□□□□ -1.18
CDH8-203ENST00000577390 C5orf47Q569G3 176 aa7.66□□□□□ -1.18
CDH8-203ENST00000577390 TMEM255AQ5JRV8 349 aa7.66□□□□□ -1.18
CDH8-203ENST00000577390 DMKNQ6E0U4 476 aaPredicted RBP7.66□□□□□ -1.18
CDH8-203ENST00000577390 TRAV30A0A087WSZ9 112 aa7.66□□□□□ -1.18
CDH8-203ENST00000577390 FOXH1O75593 365 aa7.66□□□□□ -1.18
CDH8-203ENST00000577390 SFT2D2O95562 160 aa7.66□□□□□ -1.18
CDH8-203ENST00000577390 FOXF1Q12946 379 aa7.66□□□□□ -1.18
CDH8-203ENST00000577390 PCSK4Q6UW60 755 aa7.66□□□□□ -1.18
CDH8-203ENST00000577390 Q8NFD4 153 aa7.66□□□□□ -1.18
CDH8-203ENST00000577390 ATP6V0BQ99437 205 aa7.66□□□□□ -1.18
CDH8-203ENST00000577390 KLF16Q9BXK1 252 aaPredicted RBP7.66□□□□□ -1.18
CDH8-203ENST00000577390 CXorf36Q9H7Y0 433 aa7.66□□□□□ -1.18
CDH8-203ENST00000577390 TMEM242Q9NWH2 141 aa7.66□□□□□ -1.18
CDH8-203ENST00000577390 PRSS21Q9Y6M0 314 aa7.66□□□□□ -1.18
CDH8-203ENST00000577390 FOXI3A8MTJ6 420 aaPredicted RBP7.66□□□□□ -1.18
CDH8-203ENST00000577390 PSG9Q00887 426 aa7.66□□□□□ -1.18
CDH8-203ENST00000577390 IL13RA2Q14627 380 aa7.66□□□□□ -1.18
CDH8-203ENST00000577390 SLC23A3Q6PIS1 610 aa7.66□□□□□ -1.18
CDH8-203ENST00000577390 MVB12AQ96EY5 273 aa7.66□□□□□ -1.18
CDH8-203ENST00000577390 REG1AP05451 166 aa7.66□□□□□ -1.18
CDH8-203ENST00000577390 MRGPRGQ86SM5 289 aa7.66□□□□□ -1.18
CDH8-203ENST00000577390 SMRP1Q8NCR6 262 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms