RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 AURKAIP1Q9NWT8 199 aaPredicted RBP18.15■□□□□ 0.5
SNF8-217ENST00000576353 IGHV4OR15-8A0A075B7B6 117 aa18.14■□□□□ 0.49
SNF8-217ENST00000576353 A0A087WW49 117 aa18.14■□□□□ 0.49
SNF8-217ENST00000576353 FABP12A6NFH5 140 aa18.14■□□□□ 0.49
SNF8-217ENST00000576353 HMX3A6NHT5 357 aa18.14■□□□□ 0.49
SNF8-217ENST00000576353 MARCH11A6NNE9 402 aa18.14■□□□□ 0.49
SNF8-217ENST00000576353 SEC14L6B5MCN3 397 aa18.14■□□□□ 0.49
SNF8-217ENST00000576353 ZNF585BQ52M93 769 aa18.14■□□□□ 0.49
SNF8-217ENST00000576353 CADM3Q8N126 398 aa18.14■□□□□ 0.49
SNF8-217ENST00000576353 OR4D10Q8NGI6 311 aa18.14■□□□□ 0.49
SNF8-217ENST00000576353 DCUN1D4Q92564 292 aa18.14■□□□□ 0.49
SNF8-217ENST00000576353 COMMD5Q9GZQ3 224 aa18.14■□□□□ 0.49
SNF8-217ENST00000576353 RANGRFQ9HD47 186 aaPredicted RBP18.14■□□□□ 0.49
SNF8-217ENST00000576353 ZNF257Q9Y2Q1 563 aa18.14■□□□□ 0.49
SNF8-217ENST00000576353 FAM223BA6NKX1 122 aa18.13■□□□□ 0.49
SNF8-217ENST00000576353 NPIPB5A8MRT5 1133 aa18.13■□□□□ 0.49
SNF8-217ENST00000576353 E7EUB6 86 aa18.13■□□□□ 0.49
SNF8-217ENST00000576353 OVOL1O14753 267 aa18.13■□□□□ 0.49
SNF8-217ENST00000576353 GSTZ1O43708 216 aaPredicted RBP18.13■□□□□ 0.49
SNF8-217ENST00000576353 KRASP01116 189 aa18.13■□□□□ 0.49
SNF8-217ENST00000576353 FAM223AQ8IWN6 122 aa18.13■□□□□ 0.49
SNF8-217ENST00000576353 TRBV9A0A0B4J1U6 114 aa18.12■□□□□ 0.49
SNF8-217ENST00000576353 TRAV3A0A0B4J244 114 aa18.12■□□□□ 0.49
SNF8-217ENST00000576353 DHFRP00374 187 aa18.12■□□□□ 0.49
SNF8-217ENST00000576353 RPA2P15927 270 aa18.12■□□□□ 0.49
SNF8-217ENST00000576353 SLURP1P55000 103 aa18.12■□□□□ 0.49
SNF8-217ENST00000576353 KRTAP10-11P60412 298 aa18.12■□□□□ 0.49
SNF8-217ENST00000576353 RND3P61587 244 aa18.12■□□□□ 0.49
SNF8-217ENST00000576353 RHOGP84095 191 aa18.12■□□□□ 0.49
SNF8-217ENST00000576353 SCGB2B2Q4G0G5 96 aa18.12■□□□□ 0.49
SNF8-217ENST00000576353 ZFAND1Q8TCF1 268 aa18.12■□□□□ 0.49
SNF8-217ENST00000576353 DLX4Q92988 240 aaPredicted RBP18.12■□□□□ 0.49
SNF8-217ENST00000576353 SOSTQ9BQB4 213 aa18.12■□□□□ 0.49
SNF8-217ENST00000576353 A0A1B0GW64 132 aa18.11■□□□□ 0.49
SNF8-217ENST00000576353 DISC1C4P0D8 188 aa18.11■□□□□ 0.49
SNF8-217ENST00000576353 PRH1P02810 166 aa18.11■□□□□ 0.49
SNF8-217ENST00000576353 ZP3P21754 424 aa18.11■□□□□ 0.49
SNF8-217ENST00000576353 INSL3P51460 131 aa18.11■□□□□ 0.49
SNF8-217ENST00000576353 OR2B8PP59922 312 aa18.11■□□□□ 0.49
SNF8-217ENST00000576353 ATP5G2Q06055 141 aa18.11■□□□□ 0.49
SNF8-217ENST00000576353 ZNF343Q6P1L6 599 aa18.11■□□□□ 0.49
SNF8-217ENST00000576353 NECAP1Q8NC96 275 aa18.11■□□□□ 0.49
SNF8-217ENST00000576353 SRSF8Q9BRL6 282 aaKnown RBP18.11■□□□□ 0.49
SNF8-217ENST00000576353 AKIP1Q9NQ31 210 aa18.11■□□□□ 0.49
SNF8-217ENST00000576353 ANKRD34BA5PLL1 514 aa18.1■□□□□ 0.49
SNF8-217ENST00000576353 SNAPC5O75971 98 aa18.1■□□□□ 0.49
SNF8-217ENST00000576353 CRYGCP07315 174 aa18.1■□□□□ 0.49
SNF8-217ENST00000576353 AKAIN1P0CW23 69 aa18.1■□□□□ 0.49
SNF8-217ENST00000576353 MYOD1P15172 320 aa18.1■□□□□ 0.49
SNF8-217ENST00000576353 PTBP1P26599 531 aaKnown RBP eCLIP18.1■□□□□ 0.49
SNF8-217ENST00000576353 PSMB6P28072 239 aa18.1■□□□□ 0.49
SNF8-217ENST00000576353 S100A5P33763 92 aa18.1■□□□□ 0.49
SNF8-217ENST00000576353 G6PCP35575 357 aa18.1■□□□□ 0.49
SNF8-217ENST00000576353 ECI1P42126 302 aa18.1■□□□□ 0.49
SNF8-217ENST00000576353 PPP5CP53041 499 aa18.1■□□□□ 0.49
SNF8-217ENST00000576353 PIGPP57054 158 aa18.1■□□□□ 0.49
SNF8-217ENST00000576353 ZNF45Q02386 682 aa18.1■□□□□ 0.49
SNF8-217ENST00000576353 MRAPQ8TCY5 172 aa18.1■□□□□ 0.49
SNF8-217ENST00000576353 PEF1Q9UBV8 284 aaKnown RBP18.1■□□□□ 0.49
SNF8-217ENST00000576353 RBMXL2O75526 392 aaKnown RBP18.09■□□□□ 0.49
SNF8-217ENST00000576353 SERPINE2P07093 398 aa18.09■□□□□ 0.49
SNF8-217ENST00000576353 AREGP15514 252 aa18.09■□□□□ 0.49
SNF8-217ENST00000576353 PI3P19957 117 aa18.09■□□□□ 0.49
SNF8-217ENST00000576353 DEFA5Q01523 94 aa18.09■□□□□ 0.49
SNF8-217ENST00000576353 THOC7Q6I9Y2 204 aaKnown RBP18.09■□□□□ 0.49
SNF8-217ENST00000576353 TSC22D3Q99576 134 aa18.09■□□□□ 0.49
SNF8-217ENST00000576353 QTRT1Q9BXR0 403 aaKnown RBP18.09■□□□□ 0.49
SNF8-217ENST00000576353 COPZ2Q9P299 210 aa18.09■□□□□ 0.49
SNF8-217ENST00000576353 CGB1A6NKQ9 187 aa18.08■□□□□ 0.48
SNF8-217ENST00000576353 HIST1H1BP16401 226 aaKnown RBP18.08■□□□□ 0.48
SNF8-217ENST00000576353 FAM209BQ5JX69 171 aa18.08■□□□□ 0.48
SNF8-217ENST00000576353 ZNF429Q86V71 674 aa18.08■□□□□ 0.48
SNF8-217ENST00000576353 CCDC71LQ8N9Z2 235 aa18.08■□□□□ 0.48
SNF8-217ENST00000576353 OR1L8Q8NGR8 309 aa18.08■□□□□ 0.48
SNF8-217ENST00000576353 OR13C8Q8NGS7 320 aa18.08■□□□□ 0.48
SNF8-217ENST00000576353 FKBP11Q9NYL4 201 aa18.08■□□□□ 0.48
SNF8-217ENST00000576353 PRNDQ9UKY0 176 aa18.08■□□□□ 0.48
SNF8-217ENST00000576353 ANKRD20A5PA0PJZ0 165 aa18.07■□□□□ 0.48
SNF8-217ENST00000576353 OR2J3O76001 311 aa18.07■□□□□ 0.48
SNF8-217ENST00000576353 CTSDP07339 412 aaPredicted RBP18.07■□□□□ 0.48
SNF8-217ENST00000576353 TRAPPC2P0DI81 140 aa18.07■□□□□ 0.48
SNF8-217ENST00000576353 TRAPPC2BP0DI82 140 aa18.07■□□□□ 0.48
SNF8-217ENST00000576353 DEFA4P12838 97 aa18.07■□□□□ 0.48
SNF8-217ENST00000576353 CTRB1P17538 263 aa18.07■□□□□ 0.48
SNF8-217ENST00000576353 CTRB2Q6GPI1 263 aa18.07■□□□□ 0.48
SNF8-217ENST00000576353 FAAP20Q6NZ36 180 aa18.07■□□□□ 0.48
SNF8-217ENST00000576353 HSD17B13Q7Z5P4 300 aaPredicted RBP18.07■□□□□ 0.48
SNF8-217ENST00000576353 OR4C16Q8NGL9 310 aa18.07■□□□□ 0.48
SNF8-217ENST00000576353 MARCH1Q8TCQ1 289 aa18.07■□□□□ 0.48
SNF8-217ENST00000576353 PRRT1Q99946 306 aa18.07■□□□□ 0.48
SNF8-217ENST00000576353 THAP7Q9BT49 309 aaPredicted RBP18.07■□□□□ 0.48
SNF8-217ENST00000576353 FBXL7Q9UJT9 491 aa18.07■□□□□ 0.48
SNF8-217ENST00000576353 TEX50A0A1B0GTY4 177 aa18.06■□□□□ 0.48
SNF8-217ENST00000576353 IGLC7A0M8Q6 106 aa18.06■□□□□ 0.48
SNF8-217ENST00000576353 H0Y980 276 aa18.06■□□□□ 0.48
SNF8-217ENST00000576353 EXOSC2Q13868 293 aaKnown RBP18.06■□□□□ 0.48
SNF8-217ENST00000576353 SURF2Q15527 256 aaPredicted RBP18.06■□□□□ 0.48
SNF8-217ENST00000576353 KLK9Q2XQG4 91 aa18.06■□□□□ 0.48
SNF8-217ENST00000576353 C15orf32Q32M92 178 aa18.06■□□□□ 0.48
SNF8-217ENST00000576353 H2BFWTQ7Z2G1 175 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms