RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 FAM223AQ8IWN6 122 aa11.79□□□□□ -0.52
SMG6-220ENST00000576218 ARRDC1Q8N5I2 433 aa11.79□□□□□ -0.52
SMG6-220ENST00000576218 DLX4Q92988 240 aaPredicted RBP11.79□□□□□ -0.52
SMG6-220ENST00000576218 RSRP1Q9BUV0 290 aa11.79□□□□□ -0.52
SMG6-220ENST00000576218 ELOVL1Q9BW60 279 aa11.79□□□□□ -0.52
SMG6-220ENST00000576218 ZNF257Q9Y2Q1 563 aa11.79□□□□□ -0.52
SMG6-220ENST00000576218 SERPINE2P07093 398 aa11.78□□□□□ -0.52
SMG6-220ENST00000576218 INSL3P51460 131 aa11.78□□□□□ -0.52
SMG6-220ENST00000576218 SSBP1Q04837 148 aaKnown RBP11.78□□□□□ -0.52
SMG6-220ENST00000576218 EXOSC2Q13868 293 aaKnown RBP11.78□□□□□ -0.52
SMG6-220ENST00000576218 STEAP1BQ6NZ63 245 aa11.78□□□□□ -0.52
SMG6-220ENST00000576218 ZNF429Q86V71 674 aa11.78□□□□□ -0.52
SMG6-220ENST00000576218 TTC9CQ8N5M4 171 aa11.78□□□□□ -0.52
SMG6-220ENST00000576218 TMEM229BQ8NBD8 167 aa11.78□□□□□ -0.52
SMG6-220ENST00000576218 OR4C12Q96R67 309 aa11.78□□□□□ -0.52
SMG6-220ENST00000576218 HINT2Q9BX68 163 aa11.78□□□□□ -0.52
SMG6-220ENST00000576218 SLC2A9Q9NRM0 540 aa11.78□□□□□ -0.52
SMG6-220ENST00000576218 PEF1Q9UBV8 284 aaKnown RBP11.78□□□□□ -0.52
SMG6-220ENST00000576218 NPIPB5A8MRT5 1133 aa11.77□□□□□ -0.53
SMG6-220ENST00000576218 DISC1C4P0D8 188 aa11.77□□□□□ -0.53
SMG6-220ENST00000576218 TEX22C9J3V5 150 aa11.77□□□□□ -0.53
SMG6-220ENST00000576218 UPK2O00526 184 aa11.77□□□□□ -0.53
SMG6-220ENST00000576218 RBMXL2O75526 392 aaKnown RBP11.77□□□□□ -0.53
SMG6-220ENST00000576218 OR2J3O76001 311 aa11.77□□□□□ -0.53
SMG6-220ENST00000576218 REG1AP05451 166 aa11.77□□□□□ -0.53
SMG6-220ENST00000576218 IL6RP08887 468 aaPredicted RBP11.77□□□□□ -0.53
SMG6-220ENST00000576218 ZNF735P0CB33 412 aa11.77□□□□□ -0.53
SMG6-220ENST00000576218 MYOD1P15172 320 aa11.77□□□□□ -0.53
SMG6-220ENST00000576218 S100A5P33763 92 aa11.77□□□□□ -0.53
SMG6-220ENST00000576218 G6PCP35575 357 aa11.77□□□□□ -0.53
SMG6-220ENST00000576218 MECP2P51608 486 aaKnown RBP11.77□□□□□ -0.53
SMG6-220ENST00000576218 UCP3P55916 312 aa11.77□□□□□ -0.53
SMG6-220ENST00000576218 DCTN2Q13561 401 aaKnown RBP11.77□□□□□ -0.53
SMG6-220ENST00000576218 MEF2DQ14814 521 aa11.77□□□□□ -0.53
SMG6-220ENST00000576218 TATDN3Q17R31 274 aa11.77□□□□□ -0.53
SMG6-220ENST00000576218 RPEL1Q2QD12 228 aa11.77□□□□□ -0.53
SMG6-220ENST00000576218 CCDC71LQ8N9Z2 235 aa11.77□□□□□ -0.53
SMG6-220ENST00000576218 NECAP1Q8NC96 275 aa11.77□□□□□ -0.53
SMG6-220ENST00000576218 ZFAND1Q8TCF1 268 aa11.77□□□□□ -0.53
SMG6-220ENST00000576218 SMIM4Q8WVI0 70 aa11.77□□□□□ -0.53
SMG6-220ENST00000576218 AKIP1Q9NQ31 210 aa11.77□□□□□ -0.53
SMG6-220ENST00000576218 COPZ2Q9P299 210 aa11.77□□□□□ -0.53
SMG6-220ENST00000576218 RSL24D1Q9UHA3 163 aaKnown RBP11.77□□□□□ -0.53
SMG6-220ENST00000576218 CEPT1Q9Y6K0 416 aa11.77□□□□□ -0.53
SMG6-220ENST00000576218 TRAV3A0A0B4J244 114 aa11.76□□□□□ -0.53
SMG6-220ENST00000576218 FABP12A6NFH5 140 aa11.76□□□□□ -0.53
SMG6-220ENST00000576218 CYB5BO43169 146 aa11.76□□□□□ -0.53
SMG6-220ENST00000576218 BRI3O95415 125 aa11.76□□□□□ -0.53
SMG6-220ENST00000576218 AREGP15514 252 aa11.76□□□□□ -0.53
SMG6-220ENST00000576218 PI3P19957 117 aa11.76□□□□□ -0.53
SMG6-220ENST00000576218 PSMB6P28072 239 aa11.76□□□□□ -0.53
SMG6-220ENST00000576218 PIGPP57054 158 aa11.76□□□□□ -0.53
SMG6-220ENST00000576218 POU2AF1Q16633 256 aa11.76□□□□□ -0.53
SMG6-220ENST00000576218 C15orf32Q32M92 178 aa11.76□□□□□ -0.53
SMG6-220ENST00000576218 OR4D10Q8NGI6 311 aa11.76□□□□□ -0.53
SMG6-220ENST00000576218 ZNF486Q96H40 463 aaPredicted RBP11.76□□□□□ -0.53
SMG6-220ENST00000576218 TSC22D3Q99576 134 aa11.76□□□□□ -0.53
SMG6-220ENST00000576218 QTRT1Q9BXR0 403 aaKnown RBP11.76□□□□□ -0.53
SMG6-220ENST00000576218 SLIRPQ9GZT3 109 aaKnown RBP11.76□□□□□ -0.53
SMG6-220ENST00000576218 FBXL7Q9UJT9 491 aa11.76□□□□□ -0.53
SMG6-220ENST00000576218 TNCP24821 2201 aa11.76□□□□□ -0.53
SMG6-220ENST00000576218 WI2-2373I1.2A0A1W2PRP0 233 aa11.75□□□□□ -0.53
SMG6-220ENST00000576218 K7EIL1 84 aa11.75□□□□□ -0.53
SMG6-220ENST00000576218 AKAIN1P0CW23 69 aa11.75□□□□□ -0.53
SMG6-220ENST00000576218 TRAPPC2P0DI81 140 aa11.75□□□□□ -0.53
SMG6-220ENST00000576218 TRAPPC2BP0DI82 140 aa11.75□□□□□ -0.53
SMG6-220ENST00000576218 HIST1H1BP16401 226 aaKnown RBP11.75□□□□□ -0.53
SMG6-220ENST00000576218 OR2B8PP59922 312 aa11.75□□□□□ -0.53
SMG6-220ENST00000576218 FAM209BQ5JX69 171 aa11.75□□□□□ -0.53
SMG6-220ENST00000576218 ZNF343Q6P1L6 599 aa11.75□□□□□ -0.53
SMG6-220ENST00000576218 H2BFWTQ7Z2G1 175 aa11.75□□□□□ -0.53
SMG6-220ENST00000576218 TERB2Q8NHR7 220 aa11.75□□□□□ -0.53
SMG6-220ENST00000576218 RNASE11Q8TAA1 199 aaKnown RBP11.75□□□□□ -0.53
SMG6-220ENST00000576218 C14orf166Q9Y224 244 aaKnown RBP11.75□□□□□ -0.53
SMG6-220ENST00000576218 E7EUB6 86 aa11.74□□□□□ -0.53
SMG6-220ENST00000576218 CTDSPLO15194 276 aa11.74□□□□□ -0.53
SMG6-220ENST00000576218 ATG12O94817 140 aa11.74□□□□□ -0.53
SMG6-220ENST00000576218 CD74P04233 296 aa11.74□□□□□ -0.53
SMG6-220ENST00000576218 AKR1C2P52895 323 aa11.74□□□□□ -0.53
SMG6-220ENST00000576218 SYNJ2BPP57105 145 aa11.74□□□□□ -0.53
SMG6-220ENST00000576218 ZNF45Q02386 682 aa11.74□□□□□ -0.53
SMG6-220ENST00000576218 TRIM16LQ309B1 348 aa11.74□□□□□ -0.53
SMG6-220ENST00000576218 THOC7Q6I9Y2 204 aaKnown RBP11.74□□□□□ -0.53
SMG6-220ENST00000576218 FAAP20Q6NZ36 180 aa11.74□□□□□ -0.53
SMG6-220ENST00000576218 C19orf35Q6ZS72 473 aa11.74□□□□□ -0.53
SMG6-220ENST00000576218 OR6Q1Q8NGQ2 317 aa11.74□□□□□ -0.53
SMG6-220ENST00000576218 OR1L8Q8NGR8 309 aa11.74□□□□□ -0.53
SMG6-220ENST00000576218 OR4A16Q8NH70 328 aa11.74□□□□□ -0.53
SMG6-220ENST00000576218 EEF1AKMT3Q96AZ1 226 aa11.74□□□□□ -0.53
SMG6-220ENST00000576218 PRR25Q96S07 402 aa11.74□□□□□ -0.53
SMG6-220ENST00000576218 FAM212BQ9NTI7 297 aaPredicted RBP11.74□□□□□ -0.53
SMG6-220ENST00000576218 FKBP11Q9NYL4 201 aa11.74□□□□□ -0.53
SMG6-220ENST00000576218 THYN1Q9P016 225 aa11.74□□□□□ -0.53
SMG6-220ENST00000576218 PRNDQ9UKY0 176 aa11.74□□□□□ -0.53
SMG6-220ENST00000576218 ZNF256Q9Y2P7 627 aaPredicted RBP11.74□□□□□ -0.53
SMG6-220ENST00000576218 NSG2Q9Y328 171 aa11.74□□□□□ -0.53
SMG6-220ENST00000576218 OR51B2Q9Y5P1 312 aa11.74□□□□□ -0.53
SMG6-220ENST00000576218 TRBV9A0A0B4J1U6 114 aa11.73□□□□□ -0.53
SMG6-220ENST00000576218 TNFSF8P32971 234 aa11.73□□□□□ -0.53
SMG6-220ENST00000576218 ZNF585BQ52M93 769 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms