RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 HSPA13P48723 471 aa4.48□□□□□ -1.69
HERPUD1-217ENST00000569429 HNRNPA3P51991 378 aaKnown RBP4.48□□□□□ -1.69
HERPUD1-217ENST00000569429 UBE2KP61086 200 aa4.48□□□□□ -1.69
HERPUD1-217ENST00000569429 NUTF2P61970 127 aaKnown RBP4.48□□□□□ -1.69
HERPUD1-217ENST00000569429 VMA21Q3ZAQ7 101 aa4.48□□□□□ -1.69
HERPUD1-217ENST00000569429 C10orf55Q5SWW7 151 aa4.48□□□□□ -1.69
HERPUD1-217ENST00000569429 UBE2UQ5VVX9 321 aa4.48□□□□□ -1.69
HERPUD1-217ENST00000569429 TTC23Q5W5X9 447 aa4.48□□□□□ -1.69
HERPUD1-217ENST00000569429 SPSB3Q6PJ21 355 aa4.48□□□□□ -1.69
HERPUD1-217ENST00000569429 SLC35F2Q8IXU6 374 aa4.48□□□□□ -1.69
HERPUD1-217ENST00000569429 DHRSXQ8N5I4 330 aa4.48□□□□□ -1.69
HERPUD1-217ENST00000569429 TMEM116Q8NCL8 245 aa4.48□□□□□ -1.69
HERPUD1-217ENST00000569429 RFKQ969G6 155 aa4.48□□□□□ -1.69
HERPUD1-217ENST00000569429 CPNE2Q96FN4 548 aaPredicted RBP4.48□□□□□ -1.69
HERPUD1-217ENST00000569429 ZNF414Q96IQ9 312 aa4.48□□□□□ -1.69
HERPUD1-217ENST00000569429 Q96MT0 163 aa4.48□□□□□ -1.69
HERPUD1-217ENST00000569429 ZNF184Q99676 751 aaPredicted RBP4.48□□□□□ -1.69
HERPUD1-217ENST00000569429 ARPC5LQ9BPX5 153 aa4.48□□□□□ -1.69
HERPUD1-217ENST00000569429 MS4A6AQ9H2W1 248 aa4.48□□□□□ -1.69
HERPUD1-217ENST00000569429 ZNF430Q9H8G1 570 aaPredicted RBP4.48□□□□□ -1.69
HERPUD1-217ENST00000569429 C8orf4Q9NR00 106 aa4.48□□□□□ -1.69
HERPUD1-217ENST00000569429 XCL2Q9UBD3 114 aa4.48□□□□□ -1.69
HERPUD1-217ENST00000569429 YTHDF2Q9Y5A9 579 aaKnown RBP4.48□□□□□ -1.69
HERPUD1-217ENST00000569429 TNFRSF18Q9Y5U5 241 aa4.48□□□□□ -1.69
HERPUD1-217ENST00000569429 IGHV3OR16-8A0A075B7F1 116 aa4.47□□□□□ -1.69
HERPUD1-217ENST00000569429 DPPA5A6NC42 116 aa4.47□□□□□ -1.69
HERPUD1-217ENST00000569429 METTL15A6NJ78 407 aa4.47□□□□□ -1.69
HERPUD1-217ENST00000569429 F5H768 121 aa4.47□□□□□ -1.69
HERPUD1-217ENST00000569429 CASQ2O14958 399 aaPredicted RBP4.47□□□□□ -1.69
HERPUD1-217ENST00000569429 SULT1C4O75897 302 aa4.47□□□□□ -1.69
HERPUD1-217ENST00000569429 RPSAP08865 295 aaKnown RBP4.47□□□□□ -1.69
HERPUD1-217ENST00000569429 PTBP1P26599 531 aaKnown RBP eCLIP4.47□□□□□ -1.69
HERPUD1-217ENST00000569429 HMGN3Q15651 99 aa4.47□□□□□ -1.69
HERPUD1-217ENST00000569429 ESRGQ1W209 222 aa4.47□□□□□ -1.69
HERPUD1-217ENST00000569429 ACTL10Q5JWF8 245 aa4.47□□□□□ -1.69
HERPUD1-217ENST00000569429 C12orf73Q69YU5 71 aa4.47□□□□□ -1.69
HERPUD1-217ENST00000569429 IDO2Q6ZQW0 420 aa4.47□□□□□ -1.69
HERPUD1-217ENST00000569429 SSX6Q7RTT6 188 aa4.47□□□□□ -1.69
HERPUD1-217ENST00000569429 TCF24Q7RTU0 167 aa4.47□□□□□ -1.69
HERPUD1-217ENST00000569429 LRRTM1Q86UE6 522 aa4.47□□□□□ -1.69
HERPUD1-217ENST00000569429 GID4Q8IVV7 300 aa4.47□□□□□ -1.69
HERPUD1-217ENST00000569429 MMD2Q8IY49 270 aa4.47□□□□□ -1.69
HERPUD1-217ENST00000569429 PACRGLQ8N7B6 248 aa4.47□□□□□ -1.69
HERPUD1-217ENST00000569429 DUSP18Q8NEJ0 188 aa4.47□□□□□ -1.69
HERPUD1-217ENST00000569429 OR8J1Q8NGP2 316 aa4.47□□□□□ -1.69
HERPUD1-217ENST00000569429 MRPL30Q8TCC3 161 aaKnown RBP4.47□□□□□ -1.69
HERPUD1-217ENST00000569429 TRUB1Q8WWH5 349 aaKnown RBP4.47□□□□□ -1.69
HERPUD1-217ENST00000569429 BSCL2Q96G97 398 aaPredicted RBP4.47□□□□□ -1.69
HERPUD1-217ENST00000569429 GRAMD2BQ96HH9 432 aa4.47□□□□□ -1.69
HERPUD1-217ENST00000569429 UHRF2Q96PU4 802 aa4.47□□□□□ -1.69
HERPUD1-217ENST00000569429 TBX5Q99593 518 aa4.47□□□□□ -1.69
HERPUD1-217ENST00000569429 GABARAPL3Q9BY60 117 aa4.47□□□□□ -1.69
HERPUD1-217ENST00000569429 METTL9Q9H1A3 318 aa4.47□□□□□ -1.69
HERPUD1-217ENST00000569429 AMBNQ9NP70 447 aa4.47□□□□□ -1.69
HERPUD1-217ENST00000569429 TRAV3A0A0B4J244 114 aa4.46□□□□□ -1.7
HERPUD1-217ENST00000569429 DAPL1A0PJW8 107 aa4.46□□□□□ -1.7
HERPUD1-217ENST00000569429 CDRT1O95170 752 aa4.46□□□□□ -1.7
HERPUD1-217ENST00000569429 GLAP06280 429 aa4.46□□□□□ -1.7
HERPUD1-217ENST00000569429 IL6RP08887 468 aaPredicted RBP4.46□□□□□ -1.7
HERPUD1-217ENST00000569429 OR2B8PP59922 312 aa4.46□□□□□ -1.7
HERPUD1-217ENST00000569429 PLA2G7Q13093 441 aa4.46□□□□□ -1.7
HERPUD1-217ENST00000569429 CBX3Q13185 183 aa4.46□□□□□ -1.7
HERPUD1-217ENST00000569429 C4orf46Q504U0 113 aa4.46□□□□□ -1.7
HERPUD1-217ENST00000569429 OGFRL1Q5TC84 451 aaPredicted RBP4.46□□□□□ -1.7
HERPUD1-217ENST00000569429 MEDAGQ5VYS4 303 aa4.46□□□□□ -1.7
HERPUD1-217ENST00000569429 RAB12Q6IQ22 244 aa4.46□□□□□ -1.7
HERPUD1-217ENST00000569429 Q6ZRU5 148 aa4.46□□□□□ -1.7
HERPUD1-217ENST00000569429 SCXQ7RTU7 201 aa4.46□□□□□ -1.7
HERPUD1-217ENST00000569429 C8orf59Q8N0T1 100 aaPredicted RBP4.46□□□□□ -1.7
HERPUD1-217ENST00000569429 OR10H4Q8NGA5 316 aa4.46□□□□□ -1.7
HERPUD1-217ENST00000569429 OR51A4Q8NGJ6 313 aa4.46□□□□□ -1.7
HERPUD1-217ENST00000569429 OR5D14Q8NGL3 314 aa4.46□□□□□ -1.7
HERPUD1-217ENST00000569429 SVIPQ8NHG7 77 aa4.46□□□□□ -1.7
HERPUD1-217ENST00000569429 NRG4Q8WWG1 115 aa4.46□□□□□ -1.7
HERPUD1-217ENST00000569429 PTX4Q96A99 478 aa4.46□□□□□ -1.7
HERPUD1-217ENST00000569429 DGCR14Q96DF8 476 aaKnown RBP4.46□□□□□ -1.7
HERPUD1-217ENST00000569429 DAZAP1Q96EP5 407 aaKnown RBP4.46□□□□□ -1.7
HERPUD1-217ENST00000569429 OR10C1Q96KK4 312 aa4.46□□□□□ -1.7
HERPUD1-217ENST00000569429 ATP6V0BQ99437 205 aa4.46□□□□□ -1.7
HERPUD1-217ENST00000569429 GPER1Q99527 375 aa4.46□□□□□ -1.7
HERPUD1-217ENST00000569429 FAM192AQ9GZU8 254 aa4.46□□□□□ -1.7
HERPUD1-217ENST00000569429 C11orf54Q9H0W9 315 aaPredicted RBP4.46□□□□□ -1.7
HERPUD1-217ENST00000569429 WARS2Q9UGM6 360 aaKnown RBP4.46□□□□□ -1.7
HERPUD1-217ENST00000569429 IGHV3-49A0A0A0MS15 119 aa4.45□□□□□ -1.7
HERPUD1-217ENST00000569429 OR2T8A6NH00 312 aa4.45□□□□□ -1.7
HERPUD1-217ENST00000569429 LINC00473A8K010 186 aa4.45□□□□□ -1.7
HERPUD1-217ENST00000569429 E7EUB6 86 aa4.45□□□□□ -1.7
HERPUD1-217ENST00000569429 PTGES3LE9PB15 166 aa4.45□□□□□ -1.7
HERPUD1-217ENST00000569429 M0R1X1 148 aa4.45□□□□□ -1.7
HERPUD1-217ENST00000569429 SLC16A6O15403 523 aa4.45□□□□□ -1.7
HERPUD1-217ENST00000569429 ZNF780AO75290 641 aaPredicted RBP4.45□□□□□ -1.7
HERPUD1-217ENST00000569429 ZNF735P0CB33 412 aa4.45□□□□□ -1.7
HERPUD1-217ENST00000569429 RRASP10301 218 aa4.45□□□□□ -1.7
HERPUD1-217ENST00000569429 GTF2F2P13984 249 aa4.45□□□□□ -1.7
HERPUD1-217ENST00000569429 AREGP15514 252 aa4.45□□□□□ -1.7
HERPUD1-217ENST00000569429 SERPINA2P20848 420 aa4.45□□□□□ -1.7
HERPUD1-217ENST00000569429 AQP4P55087 323 aa4.45□□□□□ -1.7
HERPUD1-217ENST00000569429 EFNB1P98172 346 aa4.45□□□□□ -1.7
HERPUD1-217ENST00000569429 CDK10Q15131 360 aa4.45□□□□□ -1.7
HERPUD1-217ENST00000569429 AADACL4Q5VUY2 407 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms