RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 OR4S2Q8NH73 311 aa6.27□□□□□ -1.41
SMG1-216ENST00000569122 PGLYRP3Q96LB9 341 aa6.27□□□□□ -1.41
SMG1-216ENST00000569122 NICN1Q9BSH3 213 aa6.27□□□□□ -1.41
SMG1-216ENST00000569122 HDHD3Q9BSH5 251 aaPredicted RBP6.27□□□□□ -1.41
SMG1-216ENST00000569122 CABLES2Q9BTV7 478 aa6.27□□□□□ -1.41
SMG1-216ENST00000569122 RHPN1-AS1Q9BWJ2 59 aa6.27□□□□□ -1.41
SMG1-216ENST00000569122 DMBT1Q9UGM3 2413 aaPredicted RBP6.27□□□□□ -1.41
SMG1-216ENST00000569122 OR2T8A6NH00 312 aa6.26□□□□□ -1.41
SMG1-216ENST00000569122 SAC3D1A6NKF1 404 aa6.26□□□□□ -1.41
SMG1-216ENST00000569122 LINC00473A8K010 186 aa6.26□□□□□ -1.41
SMG1-216ENST00000569122 EPM2AB3EWF7 344 aa6.26□□□□□ -1.41
SMG1-216ENST00000569122 DNASE2O00115 360 aaPredicted RBP6.26□□□□□ -1.41
SMG1-216ENST00000569122 CHEK1O14757 476 aa6.26□□□□□ -1.41
SMG1-216ENST00000569122 SOCS1O15524 211 aa6.26□□□□□ -1.41
SMG1-216ENST00000569122 CDK1P06493 297 aa6.26□□□□□ -1.41
SMG1-216ENST00000569122 EIF4EP06730 217 aaKnown RBP6.26□□□□□ -1.41
SMG1-216ENST00000569122 CD3GP09693 182 aa6.26□□□□□ -1.41
SMG1-216ENST00000569122 CRHBPP24387 322 aa6.26□□□□□ -1.41
SMG1-216ENST00000569122 TFPI2P48307 235 aa6.26□□□□□ -1.41
SMG1-216ENST00000569122 PLA2G7Q13093 441 aa6.26□□□□□ -1.41
SMG1-216ENST00000569122 C12orf74Q32Q52 190 aa6.26□□□□□ -1.41
SMG1-216ENST00000569122 ZIK1Q3SY52 487 aaPredicted RBP6.26□□□□□ -1.41
SMG1-216ENST00000569122 THOC7Q6I9Y2 204 aaKnown RBP6.26□□□□□ -1.41
SMG1-216ENST00000569122 KCTD9Q7L273 389 aa6.26□□□□□ -1.41
SMG1-216ENST00000569122 HSD17B13Q7Z5P4 300 aaPredicted RBP6.26□□□□□ -1.41
SMG1-216ENST00000569122 PUSL1Q8N0Z8 303 aaKnown RBP6.26□□□□□ -1.41
SMG1-216ENST00000569122 TMEM116Q8NCL8 245 aa6.26□□□□□ -1.41
SMG1-216ENST00000569122 CCDC197Q8NCU1 140 aa6.26□□□□□ -1.41
SMG1-216ENST00000569122 DUSP18Q8NEJ0 188 aa6.26□□□□□ -1.41
SMG1-216ENST00000569122 OR56B1Q8NGI3 324 aa6.26□□□□□ -1.41
SMG1-216ENST00000569122 GIMAP1Q8WWP7 306 aa6.26□□□□□ -1.41
SMG1-216ENST00000569122 PHYHIPQ92561 330 aa6.26□□□□□ -1.41
SMG1-216ENST00000569122 CYYR1Q96J86 154 aa6.26□□□□□ -1.41
SMG1-216ENST00000569122 RNF2Q99496 336 aa6.26□□□□□ -1.41
SMG1-216ENST00000569122 HSD17B10Q99714 261 aaKnown RBP6.26□□□□□ -1.41
SMG1-216ENST00000569122 CHRDL1Q9BU40 450 aa6.26□□□□□ -1.41
SMG1-216ENST00000569122 LPAR5Q9H1C0 372 aa6.26□□□□□ -1.41
SMG1-216ENST00000569122 TMEM14BQ9NUH8 114 aa6.26□□□□□ -1.41
SMG1-216ENST00000569122 AASSQ9UDR5 926 aa6.26□□□□□ -1.41
SMG1-216ENST00000569122 TBC1D24Q9ULP9 559 aa6.26□□□□□ -1.41
SMG1-216ENST00000569122 ELOA3CA0A087WX78 387 aaPredicted RBP6.25□□□□□ -1.41
SMG1-216ENST00000569122 TRAV2A0A0B4J234 112 aa6.25□□□□□ -1.41
SMG1-216ENST00000569122 IGHV7-4-1A0A0J9YVY3 117 aa6.25□□□□□ -1.41
SMG1-216ENST00000569122 NUPL2O15504 423 aaKnown RBP6.25□□□□□ -1.41
SMG1-216ENST00000569122 INAFM2P0DMQ5 153 aa6.25□□□□□ -1.41
SMG1-216ENST00000569122 HLA-GP17693 338 aa6.25□□□□□ -1.41
SMG1-216ENST00000569122 QRFPP83859 136 aa6.25□□□□□ -1.41
SMG1-216ENST00000569122 UNC119Q13432 240 aa6.25□□□□□ -1.41
SMG1-216ENST00000569122 P2RY14Q15391 338 aa6.25□□□□□ -1.41
SMG1-216ENST00000569122 ZNF124Q15973 351 aa6.25□□□□□ -1.41
SMG1-216ENST00000569122 IGSF11Q5DX21 431 aa6.25□□□□□ -1.41
SMG1-216ENST00000569122 C19orf35Q6ZS72 473 aa6.25□□□□□ -1.41
SMG1-216ENST00000569122 MS4A15Q8N5U1 240 aa6.25□□□□□ -1.41
SMG1-216ENST00000569122 PECRQ9BY49 303 aa6.25□□□□□ -1.41
SMG1-216ENST00000569122 ZNF446Q9NWS9 450 aa6.25□□□□□ -1.41
SMG1-216ENST00000569122 C21orf62Q9NYP8 219 aa6.25□□□□□ -1.41
SMG1-216ENST00000569122 DIMT1Q9UNQ2 313 aaKnown RBP6.25□□□□□ -1.41
SMG1-216ENST00000569122 IGKV3-7A0A075B6H7 116 aa6.24□□□□□ -1.41
SMG1-216ENST00000569122 TRAV14DV4A0A0A6YYC5 116 aa6.24□□□□□ -1.41
SMG1-216ENST00000569122 TEX48A0A1B0GUV7 120 aa6.24□□□□□ -1.41
SMG1-216ENST00000569122 LOC100130705A0A1B0GUX0 176 aa6.24□□□□□ -1.41
SMG1-216ENST00000569122 TMEM189A5PLL7 270 aa6.24□□□□□ -1.41
SMG1-216ENST00000569122 E7EUB6 86 aa6.24□□□□□ -1.41
SMG1-216ENST00000569122 EI24O14681 340 aa6.24□□□□□ -1.41
SMG1-216ENST00000569122 REG1AP05451 166 aa6.24□□□□□ -1.41
SMG1-216ENST00000569122 FGF2P09038 288 aa6.24□□□□□ -1.41
SMG1-216ENST00000569122 CTXN2P0C2S0 81 aa6.24□□□□□ -1.41
SMG1-216ENST00000569122 SPART-AS1P0CW21 52 aa6.24□□□□□ -1.41
SMG1-216ENST00000569122 DEFB131AP59861 70 aa6.24□□□□□ -1.41
SMG1-216ENST00000569122 NUTF2P61970 127 aaKnown RBP6.24□□□□□ -1.41
SMG1-216ENST00000569122 TNP2Q05952 138 aa6.24□□□□□ -1.41
SMG1-216ENST00000569122 C1orf146Q5VVC0 180 aa6.24□□□□□ -1.41
SMG1-216ENST00000569122 SLC25A24Q6NUK1 477 aa6.24□□□□□ -1.41
SMG1-216ENST00000569122 VKORC1L1Q8N0U8 176 aa6.24□□□□□ -1.41
SMG1-216ENST00000569122 DGCR14Q96DF8 476 aaKnown RBP6.24□□□□□ -1.41
SMG1-216ENST00000569122 C5orf30Q96GV9 206 aa6.24□□□□□ -1.41
SMG1-216ENST00000569122 TMEM80Q96HE8 168 aa6.24□□□□□ -1.41
SMG1-216ENST00000569122 ARHGAP5-AS1Q96IT6 56 aa6.24□□□□□ -1.41
SMG1-216ENST00000569122 GINS3Q9BRX5 216 aa6.24□□□□□ -1.41
SMG1-216ENST00000569122 C1QTNF4Q9BXJ3 329 aa6.24□□□□□ -1.41
SMG1-216ENST00000569122 COMMD5Q9GZQ3 224 aa6.24□□□□□ -1.41
SMG1-216ENST00000569122 BET1LQ9NYM9 111 aa6.24□□□□□ -1.41
SMG1-216ENST00000569122 TMED3Q9Y3Q3 217 aa6.24□□□□□ -1.41
SMG1-216ENST00000569122 LRP1BQ9NZR2 4599 aa6.23□□□□□ -1.41
SMG1-216ENST00000569122 A0A0A6YYD4 124 aa6.23□□□□□ -1.41
SMG1-216ENST00000569122 A0A1B0GW64 132 aa6.23□□□□□ -1.41
SMG1-216ENST00000569122 ZNF207O43670 478 aaKnown RBP6.23□□□□□ -1.41
SMG1-216ENST00000569122 YIF1AO95070 293 aa6.23□□□□□ -1.41
SMG1-216ENST00000569122 LALBAP00709 142 aa6.23□□□□□ -1.41
SMG1-216ENST00000569122 FCGR3AP08637 254 aa6.23□□□□□ -1.41
SMG1-216ENST00000569122 GNB3P16520 340 aa6.23□□□□□ -1.41
SMG1-216ENST00000569122 TALDO1P37837 337 aa6.23□□□□□ -1.41
SMG1-216ENST00000569122 TMEM50BP56557 158 aa6.23□□□□□ -1.41
SMG1-216ENST00000569122 OR2B8PP59922 312 aa6.23□□□□□ -1.41
SMG1-216ENST00000569122 RBM48Q5RL73 367 aaKnown RBP6.23□□□□□ -1.41
SMG1-216ENST00000569122 FAM90A2PQ658T7 463 aa6.23□□□□□ -1.41
SMG1-216ENST00000569122 H1FOOQ8IZA3 346 aaPredicted RBP6.23□□□□□ -1.41
SMG1-216ENST00000569122 C6orf223Q8N319 242 aa6.23□□□□□ -1.41
SMG1-216ENST00000569122 GBGT1Q8N5D6 347 aa6.23□□□□□ -1.41
SMG1-216ENST00000569122 ZFP41Q8N8Y5 198 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms