RNA–Protein interactions for RNA: ENST00000565517.5

COMMD4-212, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-212ENST00000565517 ZMAT5Q9UDW3 170 aaKnown RBP11.92□□□□□ -0.5
COMMD4-212ENST00000565517 ZNF257Q9Y2Q1 563 aa11.92□□□□□ -0.5
COMMD4-212ENST00000565517 TRBV9A0A0B4J1U6 114 aa11.91□□□□□ -0.5
COMMD4-212ENST00000565517 FABP12A6NFH5 140 aa11.91□□□□□ -0.5
COMMD4-212ENST00000565517 MARCH11A6NNE9 402 aa11.91□□□□□ -0.5
COMMD4-212ENST00000565517 NPIPB5A8MRT5 1133 aa11.91□□□□□ -0.5
COMMD4-212ENST00000565517 C9orf66Q5T8R8 295 aa11.91□□□□□ -0.5
COMMD4-212ENST00000565517 OR4D10Q8NGI6 311 aa11.91□□□□□ -0.5
COMMD4-212ENST00000565517 SRSF8Q9BRL6 282 aaKnown RBP11.91□□□□□ -0.5
COMMD4-212ENST00000565517 RANGRFQ9HD47 186 aaPredicted RBP11.91□□□□□ -0.5
COMMD4-212ENST00000565517 IGHV4OR15-8A0A075B7B6 117 aa11.9□□□□□ -0.5
COMMD4-212ENST00000565517 A0A087WW49 117 aa11.9□□□□□ -0.5
COMMD4-212ENST00000565517 A0A1B0GW64 132 aa11.9□□□□□ -0.5
COMMD4-212ENST00000565517 HMX3A6NHT5 357 aa11.9□□□□□ -0.5
COMMD4-212ENST00000565517 FAM223BA6NKX1 122 aa11.9□□□□□ -0.5
COMMD4-212ENST00000565517 CRYGCP07315 174 aa11.9□□□□□ -0.5
COMMD4-212ENST00000565517 PGAM2P15259 253 aa11.9□□□□□ -0.5
COMMD4-212ENST00000565517 ECI1P42126 302 aa11.9□□□□□ -0.5
COMMD4-212ENST00000565517 INSL3P51460 131 aa11.9□□□□□ -0.5
COMMD4-212ENST00000565517 KLK9Q2XQG4 91 aa11.9□□□□□ -0.5
COMMD4-212ENST00000565517 ZNF343Q6P1L6 599 aa11.9□□□□□ -0.5
COMMD4-212ENST00000565517 FAM223AQ8IWN6 122 aa11.9□□□□□ -0.5
COMMD4-212ENST00000565517 ZFAND1Q8TCF1 268 aa11.9□□□□□ -0.5
COMMD4-212ENST00000565517 DCUN1D4Q92564 292 aa11.9□□□□□ -0.5
COMMD4-212ENST00000565517 FYTTD1Q96QD9 318 aaKnown RBP11.9□□□□□ -0.5
COMMD4-212ENST00000565517 COMMD5Q9GZQ3 224 aa11.9□□□□□ -0.5
COMMD4-212ENST00000565517 AURKAIP1Q9NWT8 199 aaPredicted RBP11.9□□□□□ -0.5
COMMD4-212ENST00000565517 KLK9Q9UKQ9 250 aa11.9□□□□□ -0.5
COMMD4-212ENST00000565517 TRAV3A0A0B4J244 114 aa11.89□□□□□ -0.51
COMMD4-212ENST00000565517 ANKRD20A5PA0PJZ0 165 aa11.89□□□□□ -0.51
COMMD4-212ENST00000565517 DPPA5A6NC42 116 aa11.89□□□□□ -0.51
COMMD4-212ENST00000565517 CGB1A6NKQ9 187 aa11.89□□□□□ -0.51
COMMD4-212ENST00000565517 SEC14L6B5MCN3 397 aa11.89□□□□□ -0.51
COMMD4-212ENST00000565517 DISC1C4P0D8 188 aa11.89□□□□□ -0.51
COMMD4-212ENST00000565517 OVOL1O14753 267 aa11.89□□□□□ -0.51
COMMD4-212ENST00000565517 KRASP01116 189 aa11.89□□□□□ -0.51
COMMD4-212ENST00000565517 PRB2P02812 416 aaPredicted RBP11.89□□□□□ -0.51
COMMD4-212ENST00000565517 AKAIN1P0CW23 69 aa11.89□□□□□ -0.51
COMMD4-212ENST00000565517 RPA2P15927 270 aa11.89□□□□□ -0.51
COMMD4-212ENST00000565517 S100A5P33763 92 aa11.89□□□□□ -0.51
COMMD4-212ENST00000565517 OR2B8PP59922 312 aa11.89□□□□□ -0.51
COMMD4-212ENST00000565517 ZNF45Q02386 682 aa11.89□□□□□ -0.51
COMMD4-212ENST00000565517 SCGB2B2Q4G0G5 96 aa11.89□□□□□ -0.51
COMMD4-212ENST00000565517 THOC7Q6I9Y2 204 aaKnown RBP11.89□□□□□ -0.51
COMMD4-212ENST00000565517 NECAP1Q8NC96 275 aa11.89□□□□□ -0.51
COMMD4-212ENST00000565517 DLX4Q92988 240 aaPredicted RBP11.89□□□□□ -0.51
COMMD4-212ENST00000565517 DNAH3Q8TD57 4116 aa11.88□□□□□ -0.51
COMMD4-212ENST00000565517 RBMXL2O75526 392 aaKnown RBP11.88□□□□□ -0.51
COMMD4-212ENST00000565517 SNAPC5O75971 98 aa11.88□□□□□ -0.51
COMMD4-212ENST00000565517 DHFRP00374 187 aa11.88□□□□□ -0.51
COMMD4-212ENST00000565517 CTRB1P17538 263 aa11.88□□□□□ -0.51
COMMD4-212ENST00000565517 ZP3P21754 424 aa11.88□□□□□ -0.51
COMMD4-212ENST00000565517 PSMB6P28072 239 aa11.88□□□□□ -0.51
COMMD4-212ENST00000565517 HOXD3P31249 432 aaPredicted RBP11.88□□□□□ -0.51
COMMD4-212ENST00000565517 G6PCP35575 357 aa11.88□□□□□ -0.51
COMMD4-212ENST00000565517 SLURP1P55000 103 aa11.88□□□□□ -0.51
COMMD4-212ENST00000565517 PIGPP57054 158 aa11.88□□□□□ -0.51
COMMD4-212ENST00000565517 KRTAP10-11P60412 298 aa11.88□□□□□ -0.51
COMMD4-212ENST00000565517 RHOGP84095 191 aa11.88□□□□□ -0.51
COMMD4-212ENST00000565517 SURF2Q15527 256 aaPredicted RBP11.88□□□□□ -0.51
COMMD4-212ENST00000565517 FAM209BQ5JX69 171 aa11.88□□□□□ -0.51
COMMD4-212ENST00000565517 CTRB2Q6GPI1 263 aa11.88□□□□□ -0.51
COMMD4-212ENST00000565517 HSD17B13Q7Z5P4 300 aaPredicted RBP11.88□□□□□ -0.51
COMMD4-212ENST00000565517 OR4C16Q8NGL9 310 aa11.88□□□□□ -0.51
COMMD4-212ENST00000565517 TSC22D3Q99576 134 aa11.88□□□□□ -0.51
COMMD4-212ENST00000565517 QTRT1Q9BXR0 403 aaKnown RBP11.88□□□□□ -0.51
COMMD4-212ENST00000565517 AKIP1Q9NQ31 210 aa11.88□□□□□ -0.51
COMMD4-212ENST00000565517 FKBP11Q9NYL4 201 aa11.88□□□□□ -0.51
COMMD4-212ENST00000565517 NDUFA13Q9P0J0 144 aa11.88□□□□□ -0.51
COMMD4-212ENST00000565517 PEF1Q9UBV8 284 aaKnown RBP11.88□□□□□ -0.51
COMMD4-212ENST00000565517 H0Y980 276 aa11.87□□□□□ -0.51
COMMD4-212ENST00000565517 B3GALNT1O75752 331 aa11.87□□□□□ -0.51
COMMD4-212ENST00000565517 PRH1P02810 166 aa11.87□□□□□ -0.51
COMMD4-212ENST00000565517 SERPINE2P07093 398 aa11.87□□□□□ -0.51
COMMD4-212ENST00000565517 CTSDP07339 412 aaPredicted RBP11.87□□□□□ -0.51
COMMD4-212ENST00000565517 MYOD1P15172 320 aa11.87□□□□□ -0.51
COMMD4-212ENST00000565517 AREGP15514 252 aa11.87□□□□□ -0.51
COMMD4-212ENST00000565517 HIST1H1BP16401 226 aaKnown RBP11.87□□□□□ -0.51
COMMD4-212ENST00000565517 PI3P19957 117 aa11.87□□□□□ -0.51
COMMD4-212ENST00000565517 PPP5CP53041 499 aa11.87□□□□□ -0.51
COMMD4-212ENST00000565517 ATP5G2Q06055 141 aa11.87□□□□□ -0.51
COMMD4-212ENST00000565517 CCDC71LQ8N9Z2 235 aa11.87□□□□□ -0.51
COMMD4-212ENST00000565517 OR1L8Q8NGR8 309 aa11.87□□□□□ -0.51
COMMD4-212ENST00000565517 OR13C8Q8NGS7 320 aa11.87□□□□□ -0.51
COMMD4-212ENST00000565517 MARCH1Q8TCQ1 289 aa11.87□□□□□ -0.51
COMMD4-212ENST00000565517 MRGPRFQ96AM1 343 aa11.87□□□□□ -0.51
COMMD4-212ENST00000565517 SEC22AQ96IW7 307 aa11.87□□□□□ -0.51
COMMD4-212ENST00000565517 FANCD2OSQ96PS1 177 aa11.87□□□□□ -0.51
COMMD4-212ENST00000565517 PRRT1Q99946 306 aa11.87□□□□□ -0.51
COMMD4-212ENST00000565517 THAP7Q9BT49 309 aaPredicted RBP11.87□□□□□ -0.51
COMMD4-212ENST00000565517 COPZ2Q9P299 210 aa11.87□□□□□ -0.51
COMMD4-212ENST00000565517 PRNDQ9UKY0 176 aa11.87□□□□□ -0.51
COMMD4-212ENST00000565517 TEX50A0A1B0GTY4 177 aa11.86□□□□□ -0.51
COMMD4-212ENST00000565517 IGLC7A0M8Q6 106 aa11.86□□□□□ -0.51
COMMD4-212ENST00000565517 ANKRD34BA5PLL1 514 aa11.86□□□□□ -0.51
COMMD4-212ENST00000565517 IGKV1-39P01597 117 aa11.86□□□□□ -0.51
COMMD4-212ENST00000565517 IGKV1D-39P04432 117 aa11.86□□□□□ -0.51
COMMD4-212ENST00000565517 TRAPPC2P0DI81 140 aa11.86□□□□□ -0.51
COMMD4-212ENST00000565517 TRAPPC2BP0DI82 140 aa11.86□□□□□ -0.51
COMMD4-212ENST00000565517 FAAP20Q6NZ36 180 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms