RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 TRAV14DV4A0A0A6YYC5 116 aa8.84□□□□□ -0.99
SF3B3-205ENST00000564899 NCBP2LA6PVI3 153 aaKnown RBP8.84□□□□□ -0.99
SF3B3-205ENST00000564899 H3BUX3 64 aa8.84□□□□□ -0.99
SF3B3-205ENST00000564899 K7EPK0 472 aa8.84□□□□□ -0.99
SF3B3-205ENST00000564899 WRBO00258 174 aa8.84□□□□□ -0.99
SF3B3-205ENST00000564899 ST8SIA3O43173 380 aa8.84□□□□□ -0.99
SF3B3-205ENST00000564899 NDUFA3O95167 84 aa8.84□□□□□ -0.99
SF3B3-205ENST00000564899 MPC2O95563 127 aa8.84□□□□□ -0.99
SF3B3-205ENST00000564899 MBPP02686 304 aaPredicted RBP8.84□□□□□ -0.99
SF3B3-205ENST00000564899 CRYGBP07316 175 aa8.84□□□□□ -0.99
SF3B3-205ENST00000564899 PET100P0DJ07 73 aa8.84□□□□□ -0.99
SF3B3-205ENST00000564899 PSMB6P28072 239 aa8.84□□□□□ -0.99
SF3B3-205ENST00000564899 F2RL1P55085 397 aa8.84□□□□□ -0.99
SF3B3-205ENST00000564899 RPL8P62917 257 aaKnown RBP8.84□□□□□ -0.99
SF3B3-205ENST00000564899 FGL1Q08830 312 aa8.84□□□□□ -0.99
SF3B3-205ENST00000564899 ZFP69Q49AA0 526 aa8.84□□□□□ -0.99
SF3B3-205ENST00000564899 Q5BKY6 102 aa8.84□□□□□ -0.99
SF3B3-205ENST00000564899 CXorf66Q5JRM2 361 aaPredicted RBP8.84□□□□□ -0.99
SF3B3-205ENST00000564899 FAM71E2Q8N5Q1 922 aa8.84□□□□□ -0.99
SF3B3-205ENST00000564899 NPBQ8NG41 125 aa8.84□□□□□ -0.99
SF3B3-205ENST00000564899 OR8H1Q8NGG4 311 aa8.84□□□□□ -0.99
SF3B3-205ENST00000564899 ZDHHC16Q969W1 377 aa8.84□□□□□ -0.99
SF3B3-205ENST00000564899 C1RLQ9NZP8 487 aa8.84□□□□□ -0.99
SF3B3-205ENST00000564899 TCF19Q9Y242 345 aa8.84□□□□□ -0.99
SF3B3-205ENST00000564899 FOXA2Q9Y261 457 aaPredicted RBP8.84□□□□□ -0.99
SF3B3-205ENST00000564899 SIGLEC9Q9Y336 463 aa8.84□□□□□ -0.99
SF3B3-205ENST00000564899 POMT1Q9Y6A1 747 aa8.84□□□□□ -0.99
SF3B3-205ENST00000564899 FAM90A26D6RGX4 464 aa8.83□□□□□ -1
SF3B3-205ENST00000564899 G3V3Q6 166 aa8.83□□□□□ -1
SF3B3-205ENST00000564899 IFNA17P01571 189 aa8.83□□□□□ -1
SF3B3-205ENST00000564899 C1QBP02746 253 aa8.83□□□□□ -1
SF3B3-205ENST00000564899 POLR2GP62487 172 aaKnown RBP eCLIP8.83□□□□□ -1
SF3B3-205ENST00000564899 ID3Q02535 119 aa8.83□□□□□ -1
SF3B3-205ENST00000564899 TNFRSF9Q07011 255 aa8.83□□□□□ -1
SF3B3-205ENST00000564899 LY6EQ16553 131 aa8.83□□□□□ -1
SF3B3-205ENST00000564899 PRSS8Q16651 343 aa8.83□□□□□ -1
SF3B3-205ENST00000564899 C5orf64Q2M2E5 130 aa8.83□□□□□ -1
SF3B3-205ENST00000564899 AARDQ4LEZ3 155 aa8.83□□□□□ -1
SF3B3-205ENST00000564899 C12orf54Q6X4T0 127 aa8.83□□□□□ -1
SF3B3-205ENST00000564899 ZNF429Q86V71 674 aa8.83□□□□□ -1
SF3B3-205ENST00000564899 MMD2Q8IY49 270 aa8.83□□□□□ -1
SF3B3-205ENST00000564899 PIFOQ8TCI5 191 aa8.83□□□□□ -1
SF3B3-205ENST00000564899 ZNF48Q96MX3 618 aaPredicted RBP8.83□□□□□ -1
SF3B3-205ENST00000564899 CLCC1Q96S66 551 aa8.83□□□□□ -1
SF3B3-205ENST00000564899 MAGT1Q9H0U3 335 aa8.83□□□□□ -1
SF3B3-205ENST00000564899 ZNF430Q9H8G1 570 aaPredicted RBP8.83□□□□□ -1
SF3B3-205ENST00000564899 PLSCR3Q9NRY6 295 aa8.83□□□□□ -1
SF3B3-205ENST00000564899 TMEM14BQ9NUH8 114 aa8.83□□□□□ -1
SF3B3-205ENST00000564899 MBD2Q9UBB5 411 aa8.83□□□□□ -1
SF3B3-205ENST00000564899 HSPB7Q9UBY9 170 aa8.83□□□□□ -1
SF3B3-205ENST00000564899 RCL1Q9Y2P8 373 aaKnown RBP8.83□□□□□ -1
SF3B3-205ENST00000564899 OR51B2Q9Y5P1 312 aa8.83□□□□□ -1
SF3B3-205ENST00000564899 NOTCH1P46531 2555 aa8.82□□□□□ -1
SF3B3-205ENST00000564899 FXYD6-FXYD2A0A087WZ82 144 aa8.82□□□□□ -1
SF3B3-205ENST00000564899 A6NDX4 124 aa8.82□□□□□ -1
SF3B3-205ENST00000564899 BTBD17A6NE02 478 aa8.82□□□□□ -1
SF3B3-205ENST00000564899 CEBPZOSA8MTT3 80 aa8.82□□□□□ -1
SF3B3-205ENST00000564899 H0YIZ8 118 aa8.82□□□□□ -1
SF3B3-205ENST00000564899 BOLA2-SMG1P6H3BVE0 249 aa8.82□□□□□ -1
SF3B3-205ENST00000564899 TCF21O43680 179 aa8.82□□□□□ -1
SF3B3-205ENST00000564899 SSSCA1O60232 199 aa8.82□□□□□ -1
SF3B3-205ENST00000564899 MED6O75586 246 aa8.82□□□□□ -1
SF3B3-205ENST00000564899 DEDDO75618 318 aa8.82□□□□□ -1
SF3B3-205ENST00000564899 ACTL6BO94805 426 aa8.82□□□□□ -1
SF3B3-205ENST00000564899 OR2F2O95006 317 aa8.82□□□□□ -1
SF3B3-205ENST00000564899 IGHV4-59P01825 116 aa8.82□□□□□ -1
SF3B3-205ENST00000564899 RLN2P04090 185 aa8.82□□□□□ -1
SF3B3-205ENST00000564899 HNRNPCP07910 306 aaKnown RBP eCLIP8.82□□□□□ -14e-6■■■□□ 18.9
SF3B3-205ENST00000564899 FGF2P09038 288 aa8.82□□□□□ -1
SF3B3-205ENST00000564899 MYOD1P15172 320 aa8.82□□□□□ -1
SF3B3-205ENST00000564899 SPCS3P61009 180 aa8.82□□□□□ -1
SF3B3-205ENST00000564899 HSPE1P61604 102 aaKnown RBP8.82□□□□□ -1
SF3B3-205ENST00000564899 GNB1P62873 340 aa8.82□□□□□ -1
SF3B3-205ENST00000564899 SPINK9Q5DT21 86 aa8.82□□□□□ -1
SF3B3-205ENST00000564899 C11orf87Q6NUJ2 197 aa8.82□□□□□ -1
SF3B3-205ENST00000564899 PRSS54Q6PEW0 395 aa8.82□□□□□ -1
SF3B3-205ENST00000564899 PPP1R27Q86WC6 154 aa8.82□□□□□ -1
SF3B3-205ENST00000564899 TMEM219Q86XT9 240 aa8.82□□□□□ -1
SF3B3-205ENST00000564899 OR52E5Q8NH55 327 aa8.82□□□□□ -1
SF3B3-205ENST00000564899 OR5R1Q8NH85 324 aa8.82□□□□□ -1
SF3B3-205ENST00000564899 THAP6Q8TBB0 222 aa8.82□□□□□ -1
SF3B3-205ENST00000564899 PPP1R14BQ96C90 147 aa8.82□□□□□ -1
SF3B3-205ENST00000564899 RBM14Q96PK6 669 aaKnown RBP8.82□□□□□ -1
SF3B3-205ENST00000564899 SLC25A33Q9BSK2 321 aa8.82□□□□□ -1
SF3B3-205ENST00000564899 COMMD5Q9GZQ3 224 aa8.82□□□□□ -1
SF3B3-205ENST00000564899 RBKSQ9H477 322 aa8.82□□□□□ -1
SF3B3-205ENST00000564899 FKBP11Q9NYL4 201 aa8.82□□□□□ -1
SF3B3-205ENST00000564899 OR5AC2Q9NZP5 309 aa8.82□□□□□ -1
SF3B3-205ENST00000564899 CACFD1Q9UGQ2 172 aa8.82□□□□□ -1
SF3B3-205ENST00000564899 PITPNC1Q9UKF7 332 aa8.82□□□□□ -1
SF3B3-205ENST00000564899 ZNF257Q9Y2Q1 563 aa8.82□□□□□ -1
SF3B3-205ENST00000564899 MOB4Q9Y3A3 225 aa8.82□□□□□ -1
SF3B3-205ENST00000564899 TEX50A0A1B0GTY4 177 aa8.81□□□□□ -1
SF3B3-205ENST00000564899 L7N2F9 121 aa8.81□□□□□ -1
SF3B3-205ENST00000564899 SYNGR2O43760 224 aa8.81□□□□□ -1
SF3B3-205ENST00000564899 CA2P00918 260 aa8.81□□□□□ -1
SF3B3-205ENST00000564899 OPN1MWP04001 364 aa8.81□□□□□ -1
SF3B3-205ENST00000564899 OPN1MW2P0DN77 364 aa8.81□□□□□ -1
SF3B3-205ENST00000564899 OPN1MW3P0DN78 364 aa8.81□□□□□ -1
SF3B3-205ENST00000564899 IAPPP10997 89 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms