RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 E7EUB6 86 aa9.21□□□□□ -0.94
GTF3C1-204ENST00000564664 OR2C1O95371 312 aa9.21□□□□□ -0.94
GTF3C1-204ENST00000564664 CLEC2LP0C7M8 214 aa9.21□□□□□ -0.94
GTF3C1-204ENST00000564664 ARL3P36405 182 aa9.21□□□□□ -0.94
GTF3C1-204ENST00000564664 CD81P60033 236 aa9.21□□□□□ -0.94
GTF3C1-204ENST00000564664 ADAMTSL5Q6ZMM2 481 aa9.21□□□□□ -0.94
GTF3C1-204ENST00000564664 HSD17B13Q7Z5P4 300 aaPredicted RBP9.21□□□□□ -0.94
GTF3C1-204ENST00000564664 GVQW1Q8N7I0 195 aa9.21□□□□□ -0.94
GTF3C1-204ENST00000564664 HRASLSQ9HDD0 168 aa9.21□□□□□ -0.94
GTF3C1-204ENST00000564664 A0A1B0GW64 132 aa9.2□□□□□ -0.94
GTF3C1-204ENST00000564664 PPP5D1E7EU14 171 aa9.2□□□□□ -0.94
GTF3C1-204ENST00000564664 UPK2O00526 184 aa9.2□□□□□ -0.94
GTF3C1-204ENST00000564664 NDUFB8O95169 186 aa9.2□□□□□ -0.94
GTF3C1-204ENST00000564664 CLEC3BP05452 202 aa9.2□□□□□ -0.94
GTF3C1-204ENST00000564664 AREGP15514 252 aa9.2□□□□□ -0.94
GTF3C1-204ENST00000564664 CBLN1P23435 193 aa9.2□□□□□ -0.94
GTF3C1-204ENST00000564664 OR2B8PP59922 312 aa9.2□□□□□ -0.94
GTF3C1-204ENST00000564664 ANKRD55Q3KP44 614 aa9.2□□□□□ -0.94
GTF3C1-204ENST00000564664 SSX9Q7RTT3 188 aa9.2□□□□□ -0.94
GTF3C1-204ENST00000564664 MARC2Q969Z3 335 aa9.2□□□□□ -0.94
GTF3C1-204ENST00000564664 COMMD5Q9GZQ3 224 aa9.2□□□□□ -0.94
GTF3C1-204ENST00000564664 CEPT1Q9Y6K0 416 aa9.2□□□□□ -0.94
GTF3C1-204ENST00000564664 IGLV11-55A0A075B6I3 123 aa9.19□□□□□ -0.94
GTF3C1-204ENST00000564664 A8MWP6 167 aa9.19□□□□□ -0.94
GTF3C1-204ENST00000564664 OR11H12B2RN74 326 aa9.19□□□□□ -0.94
GTF3C1-204ENST00000564664 SULT1C2O00338 296 aa9.19□□□□□ -0.94
GTF3C1-204ENST00000564664 TNFSF12O43508 249 aa9.19□□□□□ -0.94
GTF3C1-204ENST00000564664 PTBP1P26599 531 aaKnown RBP eCLIP9.19□□□□□ -0.949e-7■■□□□ 12.9
GTF3C1-204ENST00000564664 ELLP55199 621 aaPredicted RBP9.19□□□□□ -0.94
GTF3C1-204ENST00000564664 HERV-K104P61576 105 aa9.19□□□□□ -0.94
GTF3C1-204ENST00000564664 ZNF57Q68EA5 555 aaPredicted RBP9.19□□□□□ -0.94
GTF3C1-204ENST00000564664 CLEC19AQ6UXS0 136 aa9.19□□□□□ -0.94
GTF3C1-204ENST00000564664 SLC16A13Q7RTY0 426 aa9.19□□□□□ -0.94
GTF3C1-204ENST00000564664 CCDC140Q96MF4 163 aa9.19□□□□□ -0.94
GTF3C1-204ENST00000564664 ATP6V0BQ99437 205 aa9.19□□□□□ -0.94
GTF3C1-204ENST00000564664 RNF167Q9H6Y7 350 aa9.19□□□□□ -0.94
GTF3C1-204ENST00000564664 IFT46Q9NQC8 304 aa9.19□□□□□ -0.94
GTF3C1-204ENST00000564664 COMMD9Q9P000 198 aa9.19□□□□□ -0.94
GTF3C1-204ENST00000564664 TENM2Q9NT68 2774 aa9.19□□□□□ -0.94
GTF3C1-204ENST00000564664 TRAV25A0A0B4J276 109 aa9.18□□□□□ -0.94
GTF3C1-204ENST00000564664 LCE6AA0A183 80 aa9.18□□□□□ -0.94
GTF3C1-204ENST00000564664 ZNF320A2RRD8 509 aa9.18□□□□□ -0.94
GTF3C1-204ENST00000564664 C8orf88P0DMB2 117 aa9.18□□□□□ -0.94
GTF3C1-204ENST00000564664 PTHLHP12272 177 aa9.18□□□□□ -0.94
GTF3C1-204ENST00000564664 GNRHRP30968 328 aa9.18□□□□□ -0.94
GTF3C1-204ENST00000564664 TAS2R46P59540 309 aa9.18□□□□□ -0.94
GTF3C1-204ENST00000564664 FXYD4P59646 89 aa9.18□□□□□ -0.94
GTF3C1-204ENST00000564664 ERVK-16P61578 105 aa9.18□□□□□ -0.94
GTF3C1-204ENST00000564664 NEDD8Q15843 81 aa9.18□□□□□ -0.94
GTF3C1-204ENST00000564664 GUCA2BQ16661 112 aa9.18□□□□□ -0.94
GTF3C1-204ENST00000564664 UBE2NLQ5JXB2 153 aa9.18□□□□□ -0.94
GTF3C1-204ENST00000564664 AADACL3Q5VUY0 350 aa9.18□□□□□ -0.94
GTF3C1-204ENST00000564664 ZNF818PQ6ZRF7 136 aa9.18□□□□□ -0.94
GTF3C1-204ENST00000564664 CMTM1Q8IZ96 169 aa9.18□□□□□ -0.94
GTF3C1-204ENST00000564664 DMBX1Q8NFW5 382 aa9.18□□□□□ -0.94
GTF3C1-204ENST00000564664 VN1R17PQ8TDU5 208 aa9.18□□□□□ -0.94
GTF3C1-204ENST00000564664 GPHA2Q96T91 129 aa9.18□□□□□ -0.94
GTF3C1-204ENST00000564664 QTRT1Q9BXR0 403 aaKnown RBP9.18□□□□□ -0.94
GTF3C1-204ENST00000564664 HIPK2Q9H2X6 1198 aa9.18□□□□□ -0.94
GTF3C1-204ENST00000564664 VCX3AQ9NNX9 186 aa9.18□□□□□ -0.94
GTF3C1-204ENST00000564664 MRPL27Q9P0M9 148 aaKnown RBP9.18□□□□□ -0.94
GTF3C1-204ENST00000564664 SMIM31A0A1B0GVY4 71 aa9.17□□□□□ -0.94
GTF3C1-204ENST00000564664 IGLC7A0M8Q6 106 aa9.17□□□□□ -0.94
GTF3C1-204ENST00000564664 CGB1A6NKQ9 187 aa9.17□□□□□ -0.94
GTF3C1-204ENST00000564664 HLA-AP01891 365 aaKnown RBP9.17□□□□□ -0.94
GTF3C1-204ENST00000564664 CD7P09564 240 aa9.17□□□□□ -0.94
GTF3C1-204ENST00000564664 TRAPPC2P0DI81 140 aa9.17□□□□□ -0.94
GTF3C1-204ENST00000564664 TRAPPC2BP0DI82 140 aa9.17□□□□□ -0.94
GTF3C1-204ENST00000564664 NAT1P18440 290 aa9.17□□□□□ -0.94
GTF3C1-204ENST00000564664 F2RP25116 425 aa9.17□□□□□ -0.94
GTF3C1-204ENST00000564664 LPCAT3Q6P1A2 487 aa9.17□□□□□ -0.94
GTF3C1-204ENST00000564664 UXS1Q8NBZ7 420 aa9.17□□□□□ -0.94
GTF3C1-204ENST00000564664 OR1L6Q8NGR2 347 aa9.17□□□□□ -0.94
GTF3C1-204ENST00000564664 OR1L8Q8NGR8 309 aa9.17□□□□□ -0.94
GTF3C1-204ENST00000564664 ZNF502Q8TBZ5 544 aa9.17□□□□□ -0.94
GTF3C1-204ENST00000564664 MOB3AQ96BX8 217 aa9.17□□□□□ -0.94
GTF3C1-204ENST00000564664 CMTM3Q96MX0 182 aa9.17□□□□□ -0.94
GTF3C1-204ENST00000564664 PLEKHA3Q9HB20 300 aa9.17□□□□□ -0.94
GTF3C1-204ENST00000564664 FAM212BQ9NTI7 297 aaPredicted RBP9.17□□□□□ -0.94
GTF3C1-204ENST00000564664 TMEM140Q9NV12 185 aa9.17□□□□□ -0.94
GTF3C1-204ENST00000564664 FKBP11Q9NYL4 201 aa9.17□□□□□ -0.94
GTF3C1-204ENST00000564664 EHFQ9NZC4 300 aa9.17□□□□□ -0.94
GTF3C1-204ENST00000564664 ANAPC10Q9UM13 185 aa9.17□□□□□ -0.94
GTF3C1-204ENST00000564664 UFC1Q9Y3C8 167 aa9.17□□□□□ -0.94
GTF3C1-204ENST00000564664 TMEM213A2RRL7 107 aa9.16□□□□□ -0.94
GTF3C1-204ENST00000564664 RBMY1BA6NDE4 496 aaKnown RBP9.16□□□□□ -0.94
GTF3C1-204ENST00000564664 RBMY1EA6NEQ0 496 aaKnown RBP9.16□□□□□ -0.94
GTF3C1-204ENST00000564664 PGLYRP1O75594 196 aaPredicted RBP9.16□□□□□ -0.94
GTF3C1-204ENST00000564664 TNFAIP8O95379 198 aa9.16□□□□□ -0.94
GTF3C1-204ENST00000564664 IGHV3-23P01764 117 aa9.16□□□□□ -0.94
GTF3C1-204ENST00000564664 SERPINE2P07093 398 aa9.16□□□□□ -0.94
GTF3C1-204ENST00000564664 RBMY1DP0C7P1 496 aaKnown RBP9.16□□□□□ -0.94
GTF3C1-204ENST00000564664 MYOD1P15172 320 aa9.16□□□□□ -0.94
GTF3C1-204ENST00000564664 S100GP29377 79 aa9.16□□□□□ -0.94
GTF3C1-204ENST00000564664 PRSS3P35030 304 aa9.16□□□□□ -0.94
GTF3C1-204ENST00000564664 RPS19P39019 145 aaKnown RBP9.16□□□□□ -0.94
GTF3C1-204ENST00000564664 RFX2P48378 723 aa9.16□□□□□ -0.94
GTF3C1-204ENST00000564664 TMEM69Q5SWH9 247 aa9.16□□□□□ -0.94
GTF3C1-204ENST00000564664 ZFAND6Q6FIF0 208 aa9.16□□□□□ -0.94
GTF3C1-204ENST00000564664 PLET1Q6UQ28 207 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms