RNA–Protein interactions for RNA: ENST00000563672.5

CMTM3-206, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-206ENST00000563672 MARCH11A6NNE9 402 aa15.66■□□□□ 0.1
CMTM3-206ENST00000563672 RBMXL2O75526 392 aaKnown RBP15.66■□□□□ 0.1
CMTM3-206ENST00000563672 PGAM2P15259 253 aa15.66■□□□□ 0.1
CMTM3-206ENST00000563672 RPA2P15927 270 aa15.66■□□□□ 0.1
CMTM3-206ENST00000563672 PTBP1P26599 531 aaKnown RBP eCLIP15.66■□□□□ 0.1
CMTM3-206ENST00000563672 MRGPRFQ96AM1 343 aa15.66■□□□□ 0.1
CMTM3-206ENST00000563672 USMG5Q96IX5 58 aa15.66■□□□□ 0.1
CMTM3-206ENST00000563672 FYTTD1Q96QD9 318 aaKnown RBP15.66■□□□□ 0.1
CMTM3-206ENST00000563672 IGHV4OR15-8A0A075B7B6 117 aa15.65■□□□□ 0.1
CMTM3-206ENST00000563672 A0A087WW49 117 aa15.65■□□□□ 0.1
CMTM3-206ENST00000563672 TRBV9A0A0B4J1U6 114 aa15.65■□□□□ 0.1
CMTM3-206ENST00000563672 C13orf42A0A1B0GVH6 325 aa15.65■□□□□ 0.1
CMTM3-206ENST00000563672 ANKRD20A5PA0PJZ0 165 aa15.65■□□□□ 0.1
CMTM3-206ENST00000563672 LINC01619G3V211 115 aa15.65■□□□□ 0.1
CMTM3-206ENST00000563672 KRASP01116 189 aa15.65■□□□□ 0.1
CMTM3-206ENST00000563672 PRB2P02812 416 aaPredicted RBP15.65■□□□□ 0.1
CMTM3-206ENST00000563672 HSPB1P04792 205 aaKnown RBP15.65■□□□□ 0.1
CMTM3-206ENST00000563672 AKAIN1P0CW23 69 aa15.65■□□□□ 0.1
CMTM3-206ENST00000563672 PI3P19957 117 aa15.65■□□□□ 0.1
CMTM3-206ENST00000563672 OR2B8PP59922 312 aa15.65■□□□□ 0.1
CMTM3-206ENST00000563672 ERVK-16P61578 105 aa15.65■□□□□ 0.1
CMTM3-206ENST00000563672 ZNF45Q02386 682 aa15.65■□□□□ 0.1
CMTM3-206ENST00000563672 EGFEM1PQ0D2K5 195 aa15.65■□□□□ 0.1
CMTM3-206ENST00000563672 SCGB2B2Q4G0G5 96 aa15.65■□□□□ 0.1
CMTM3-206ENST00000563672 FAAP20Q6NZ36 180 aa15.65■□□□□ 0.1
CMTM3-206ENST00000563672 SLC25A42Q86VD7 318 aa15.65■□□□□ 0.1
CMTM3-206ENST00000563672 NPIPB5A8MRT5 1133 aa15.64■□□□□ 0.09
CMTM3-206ENST00000563672 PRH1P02810 166 aa15.64■□□□□ 0.09
CMTM3-206ENST00000563672 CRYGCP07315 174 aa15.64■□□□□ 0.09
CMTM3-206ENST00000563672 PPP5CP53041 499 aa15.64■□□□□ 0.09
CMTM3-206ENST00000563672 PIGPP57054 158 aa15.64■□□□□ 0.09
CMTM3-206ENST00000563672 DEFA5Q01523 94 aa15.64■□□□□ 0.09
CMTM3-206ENST00000563672 CCDC190Q86UF4 302 aa15.64■□□□□ 0.09
CMTM3-206ENST00000563672 OR4C16Q8NGL9 310 aa15.64■□□□□ 0.09
CMTM3-206ENST00000563672 ZFAND1Q8TCF1 268 aa15.64■□□□□ 0.09
CMTM3-206ENST00000563672 DCUN1D4Q92564 292 aa15.64■□□□□ 0.09
CMTM3-206ENST00000563672 ZNF257Q9Y2Q1 563 aa15.64■□□□□ 0.09
CMTM3-206ENST00000563672 V9GYH0 126 aa15.64■□□□□ 0.09
CMTM3-206ENST00000563672 DISC1C4P0D8 188 aa15.63■□□□□ 0.09
CMTM3-206ENST00000563672 IGKV1-39P01597 117 aa15.63■□□□□ 0.09
CMTM3-206ENST00000563672 IGKV1D-39P04432 117 aa15.63■□□□□ 0.09
CMTM3-206ENST00000563672 HOXD3P31249 432 aaPredicted RBP15.63■□□□□ 0.09
CMTM3-206ENST00000563672 S100A5P33763 92 aa15.63■□□□□ 0.09
CMTM3-206ENST00000563672 G6PCP35575 357 aa15.63■□□□□ 0.09
CMTM3-206ENST00000563672 KRTAP10-11P60412 298 aa15.63■□□□□ 0.09
CMTM3-206ENST00000563672 KLK9Q2XQG4 91 aa15.63■□□□□ 0.09
CMTM3-206ENST00000563672 ZNF343Q6P1L6 599 aa15.63■□□□□ 0.09
CMTM3-206ENST00000563672 REC114Q7Z4M0 266 aa15.63■□□□□ 0.09
CMTM3-206ENST00000563672 OR13C8Q8NGS7 320 aa15.63■□□□□ 0.09
CMTM3-206ENST00000563672 MARCH1Q8TCQ1 289 aa15.63■□□□□ 0.09
CMTM3-206ENST00000563672 THAP7Q9BT49 309 aaPredicted RBP15.63■□□□□ 0.09
CMTM3-206ENST00000563672 COMMD5Q9GZQ3 224 aa15.63■□□□□ 0.09
CMTM3-206ENST00000563672 AKIP1Q9NQ31 210 aa15.63■□□□□ 0.09
CMTM3-206ENST00000563672 KLK9Q9UKQ9 250 aa15.63■□□□□ 0.09
CMTM3-206ENST00000563672 FAM223BA6NKX1 122 aa15.62■□□□□ 0.09
CMTM3-206ENST00000563672 CTSDP07339 412 aaPredicted RBP15.62■□□□□ 0.09
CMTM3-206ENST00000563672 AREGP15514 252 aa15.62■□□□□ 0.09
CMTM3-206ENST00000563672 CTRB1P17538 263 aa15.62■□□□□ 0.09
CMTM3-206ENST00000563672 PSMB6P28072 239 aa15.62■□□□□ 0.09
CMTM3-206ENST00000563672 SLURP1P55000 103 aa15.62■□□□□ 0.09
CMTM3-206ENST00000563672 RHOGP84095 191 aa15.62■□□□□ 0.09
CMTM3-206ENST00000563672 CTRB2Q6GPI1 263 aa15.62■□□□□ 0.09
CMTM3-206ENST00000563672 C19orf35Q6ZS72 473 aa15.62■□□□□ 0.09
CMTM3-206ENST00000563672 FAM223AQ8IWN6 122 aa15.62■□□□□ 0.09
CMTM3-206ENST00000563672 DLX4Q92988 240 aaPredicted RBP15.62■□□□□ 0.09
CMTM3-206ENST00000563672 SEC22AQ96IW7 307 aa15.62■□□□□ 0.09
CMTM3-206ENST00000563672 SRSF8Q9BRL6 282 aaKnown RBP15.62■□□□□ 0.09
CMTM3-206ENST00000563672 RANGRFQ9HD47 186 aaPredicted RBP15.62■□□□□ 0.09
CMTM3-206ENST00000563672 AURKAIP1Q9NWT8 199 aaPredicted RBP15.62■□□□□ 0.09
CMTM3-206ENST00000563672 NDUFA13Q9P0J0 144 aa15.62■□□□□ 0.09
CMTM3-206ENST00000563672 TEX50A0A1B0GTY4 177 aa15.61■□□□□ 0.09
CMTM3-206ENST00000563672 DPPA5A6NC42 116 aa15.61■□□□□ 0.09
CMTM3-206ENST00000563672 SEC14L6B5MCN3 397 aa15.61■□□□□ 0.09
CMTM3-206ENST00000563672 H0Y980 276 aa15.61■□□□□ 0.09
CMTM3-206ENST00000563672 ECI1P42126 302 aa15.61■□□□□ 0.09
CMTM3-206ENST00000563672 SURF2Q15527 256 aaPredicted RBP15.61■□□□□ 0.09
CMTM3-206ENST00000563672 C9orf66Q5T8R8 295 aa15.61■□□□□ 0.09
CMTM3-206ENST00000563672 NECAP1Q8NC96 275 aa15.61■□□□□ 0.09
CMTM3-206ENST00000563672 FANCD2OSQ96PS1 177 aa15.61■□□□□ 0.09
CMTM3-206ENST00000563672 TP53RKQ96S44 253 aa15.61■□□□□ 0.09
CMTM3-206ENST00000563672 SLC2A8Q9NY64 477 aa15.61■□□□□ 0.09
CMTM3-206ENST00000563672 IGLC7A0M8Q6 106 aa15.6■□□□□ 0.09
CMTM3-206ENST00000563672 ANKRD34BA5PLL1 514 aa15.6■□□□□ 0.09
CMTM3-206ENST00000563672 OVOL1O14753 267 aa15.6■□□□□ 0.09
CMTM3-206ENST00000563672 SERPINE2P07093 398 aa15.6■□□□□ 0.09
CMTM3-206ENST00000563672 ETV6P41212 452 aa15.6■□□□□ 0.09
CMTM3-206ENST00000563672 ZNF79Q15937 498 aa15.6■□□□□ 0.09
CMTM3-206ENST00000563672 PYDC2Q56P42 97 aa15.6■□□□□ 0.09
CMTM3-206ENST00000563672 CCDC71LQ8N9Z2 235 aa15.6■□□□□ 0.09
CMTM3-206ENST00000563672 OR51S1Q8NGJ8 323 aa15.6■□□□□ 0.09
CMTM3-206ENST00000563672 TRIM63Q969Q1 353 aa15.6■□□□□ 0.09
CMTM3-206ENST00000563672 PRRT1Q99946 306 aa15.6■□□□□ 0.09
CMTM3-206ENST00000563672 RTBDNQ9BSG5 229 aaPredicted RBP15.6■□□□□ 0.09
CMTM3-206ENST00000563672 QTRT1Q9BXR0 403 aaKnown RBP15.6■□□□□ 0.09
CMTM3-206ENST00000563672 COPZ2Q9P299 210 aa15.6■□□□□ 0.09
CMTM3-206ENST00000563672 NSG2Q9Y328 171 aa15.6■□□□□ 0.09
CMTM3-206ENST00000563672 C3orf85A0A1B0GTC6 90 aa15.59■□□□□ 0.09
CMTM3-206ENST00000563672 SNAPC5O75971 98 aa15.59■□□□□ 0.09
CMTM3-206ENST00000563672 OR2J3O76001 311 aa15.59■□□□□ 0.09
CMTM3-206ENST00000563672 TRAPPC2P0DI81 140 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms