RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 OPTCQ9UBM4 332 aa1.57□□□□□ -2.16
HDGFL3-202ENST00000562702 GLS2Q9UI32 602 aa1.57□□□□□ -2.16
HDGFL3-202ENST00000562702 ERGIC3Q9Y282 383 aa1.57□□□□□ -2.16
HDGFL3-202ENST00000562702 KLF12Q9Y4X4 402 aa1.57□□□□□ -2.16
HDGFL3-202ENST00000562702 HSPB11Q9Y547 144 aa1.57□□□□□ -2.16
HDGFL3-202ENST00000562702 TIMM22Q9Y584 194 aa1.57□□□□□ -2.16
HDGFL3-202ENST00000562702 PCYT1BQ9Y5K3 369 aaPredicted RBP1.57□□□□□ -2.16
HDGFL3-202ENST00000562702 ORC6Q9Y5N6 252 aa1.57□□□□□ -2.16
HDGFL3-202ENST00000562702 ALG5Q9Y673 324 aa1.57□□□□□ -2.16
HDGFL3-202ENST00000562702 MRPS18BQ9Y676 258 aaKnown RBP1.57□□□□□ -2.16
HDGFL3-202ENST00000562702 FBN1P35555 2871 aaKnown RBP1.57□□□□□ -2.16
HDGFL3-202ENST00000562702 SETD2Q9BYW2 2564 aaPredicted RBP1.57□□□□□ -2.16
HDGFL3-202ENST00000562702 POLEQ07864 2286 aa1.57□□□□□ -2.16
HDGFL3-202ENST00000562702 AKAP6Q13023 2319 aa1.57□□□□□ -2.16
HDGFL3-202ENST00000562702 HIVEP1P15822 2718 aa1.57□□□□□ -2.16
HDGFL3-202ENST00000562702 PRRC2CQ9Y520 2896 aaKnown RBP1.57□□□□□ -2.16
HDGFL3-202ENST00000562702 INTS1Q8N201 2190 aaKnown RBP1.57□□□□□ -2.16
HDGFL3-202ENST00000562702 DNAJC13O75165 2243 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 ABCA4P78363 2273 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 NCKAP5O14513 1909 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 KIAA1549Q9HCM3 1950 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 ACANP16112 2415 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 FBN2P35556 2912 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 OTOGQ6ZRI0 2925 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 TRAV8-2A0A0B4J237 113 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 TRAV8-6A0A0B4J262 113 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 LOC105371267A0A1B0GV96 52 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 GMNCA6NCL1 334 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 SMIM9A6NGZ8 99 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 ZNF729A6NN14 1252 aaPredicted RBP1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 CEACAM18A8MTB9 384 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 PPP5D1E7EU14 171 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 J3QT63 122 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 M0QYV0 167 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 M0QZK8 103 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 MANBAO00462 879 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 GABRPO00591 440 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 CTNSO60931 367 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 S1PR2O95136 353 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 IFNA1P01562 189 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 IL4P05112 153 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 IGKV4-1P06312 121 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 CST2P09228 141 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 FAM228BP0C875 321 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 OR5H8P0DN80 308 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 CD37P11049 281 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 SPNP16150 400 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 TAC1P20366 129 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 HIST1H1TP22492 207 aaPredicted RBP1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 APLNRP35414 380 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 CEACAM6P40199 344 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 PPICP45877 212 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 RPL5P46777 297 aaKnown RBP1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 INPP1P49441 399 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 OR10A3P58181 314 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 AP1S1P61966 158 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 RANP62826 216 aaKnown RBP1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 HIST1H3AP68431 136 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 H3F3AP84243 136 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 MXD1Q05195 221 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 ZNF816Q0VGE8 651 aaPredicted RBP1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 IHHQ14623 411 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 PAFAH1B3Q15102 231 aaKnown RBP1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 EBPQ15125 230 aaKnown RBP1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 IRF4Q15306 451 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 RSU1Q15404 277 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 WHAMMP3Q1A5X7 153 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 DEFB109BQ30KR1 87 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 PYCR3Q53H96 274 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 CLEC12AQ5QGZ9 265 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 C1orf195Q5TG92 126 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 TMEM42Q69YG0 159 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 C22orf39Q6P5X5 142 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 SMARCD3Q6STE5 483 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 CASP12Q6UXS9 341 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 HIST2H3AQ71DI3 136 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 TMEM144Q7Z5S9 345 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 S100A7AQ86SG5 101 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 CROCCP2Q86T23 111 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 DHFR2Q86XF0 187 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 DEFB106AQ8N104 65 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 LRRC25Q8N386 305 aaPredicted RBP1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 STX19Q8N4C7 294 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 SLC26A10Q8NG04 563 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 GPR32P1Q8NGA4 272 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 OR11H7Q8NGC8 314 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 OR6N1Q8NGY5 312 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 HAVCR2Q8TDQ0 301 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 SLC37A2Q8TED4 501 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 BORCS7Q96B45 105 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 CPNE2Q96FN4 548 aaPredicted RBP1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 ACY3Q96HD9 319 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 SLC35G5Q96KT7 338 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 SIGMAR1Q99720 223 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 HOPXQ9BPY8 73 aaPredicted RBP1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 EMC6Q9BV81 110 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 EBPLQ9BY08 206 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 SLC19A3Q9BZV2 496 aa1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 SLIRPQ9GZT3 109 aaKnown RBP1.56□□□□□ -2.16
HDGFL3-202ENST00000562702 CCDC90BQ9GZT6 254 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms