RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 MAGEA5P43359 124 aa11.73□□□□□ -0.53
GTF3C1-203ENST00000562609 SLC35B1P78383 322 aa11.73□□□□□ -0.53
GTF3C1-203ENST00000562609 PAX2Q02962 417 aa11.73□□□□□ -0.53
GTF3C1-203ENST00000562609 C3AR1Q16581 482 aa11.73□□□□□ -0.53
GTF3C1-203ENST00000562609 OR4S2Q8NH73 311 aa11.73□□□□□ -0.53
GTF3C1-203ENST00000562609 TRAV38-1A0A0B4J264 116 aa11.73□□□□□ -0.53
GTF3C1-203ENST00000562609 IGKV1-6A0A0C4DH72 117 aa11.73□□□□□ -0.53
GTF3C1-203ENST00000562609 GJE1A6NN92 205 aa11.73□□□□□ -0.53
GTF3C1-203ENST00000562609 M0R1X1 148 aa11.73□□□□□ -0.53
GTF3C1-203ENST00000562609 SMPD2O60906 423 aa11.73□□□□□ -0.53
GTF3C1-203ENST00000562609 RHOBP62745 196 aa11.73□□□□□ -0.53
GTF3C1-203ENST00000562609 FER1L6-AS1Q8NA97 138 aa11.73□□□□□ -0.53
GTF3C1-203ENST00000562609 WFDC12Q8WWY7 111 aa11.73□□□□□ -0.53
GTF3C1-203ENST00000562609 NPCDR1Q9BY65 106 aa11.73□□□□□ -0.53
GTF3C1-203ENST00000562609 LGALS7P47929 136 aa11.72□□□□□ -0.53
GTF3C1-203ENST00000562609 OR1C1Q15619 314 aa11.72□□□□□ -0.53
GTF3C1-203ENST00000562609 CEACAM16Q2WEN9 425 aa11.72□□□□□ -0.53
GTF3C1-203ENST00000562609 GCSAMLQ5JQS6 135 aa11.72□□□□□ -0.53
GTF3C1-203ENST00000562609 TMEM14EPQ6UXP3 125 aa11.72□□□□□ -0.53
GTF3C1-203ENST00000562609 LHFPL2Q6ZUX7 228 aa11.72□□□□□ -0.53
GTF3C1-203ENST00000562609 TMEM147Q9BVK8 224 aa11.72□□□□□ -0.53
GTF3C1-203ENST00000562609 SELENOKQ9Y6D0 94 aa11.72□□□□□ -0.53
GTF3C1-203ENST00000562609 ZNF292O60281 2723 aa11.72□□□□□ -0.53
GTF3C1-203ENST00000562609 CACNA1GO43497 2377 aa11.72□□□□□ -0.53
GTF3C1-203ENST00000562609 G3V4G9 280 aa11.72□□□□□ -0.53
GTF3C1-203ENST00000562609 RAMP3O60896 148 aa11.72□□□□□ -0.53
GTF3C1-203ENST00000562609 RBPJQ06330 500 aa11.72□□□□□ -0.53
GTF3C1-203ENST00000562609 DAZAP2Q15038 168 aaPredicted RBP11.72□□□□□ -0.53
GTF3C1-203ENST00000562609 Q6ZSR3 168 aa11.72□□□□□ -0.53
GTF3C1-203ENST00000562609 LSM10Q969L4 123 aaKnown RBP11.72□□□□□ -0.53
GTF3C1-203ENST00000562609 TMEM186Q96B77 213 aa11.72□□□□□ -0.53
GTF3C1-203ENST00000562609 CHODLQ9H9P2 273 aa11.72□□□□□ -0.53
GTF3C1-203ENST00000562609 PTPRZ1P23471 2315 aaPredicted RBP11.71□□□□□ -0.53
GTF3C1-203ENST00000562609 GNG7O60262 68 aa11.71□□□□□ -0.53
GTF3C1-203ENST00000562609 ZNF16P17020 682 aaPredicted RBP11.71□□□□□ -0.53
GTF3C1-203ENST00000562609 ZNF32P17041 273 aa11.71□□□□□ -0.53
GTF3C1-203ENST00000562609 SAMD13Q5VXD3 122 aa11.71□□□□□ -0.53
GTF3C1-203ENST00000562609 ZNF439Q8NDP4 499 aa11.71□□□□□ -0.53
GTF3C1-203ENST00000562609 BMPR1BO00238 502 aa11.71□□□□□ -0.54
GTF3C1-203ENST00000562609 MT-ND6P03923 174 aa11.71□□□□□ -0.54
GTF3C1-203ENST00000562609 IGLC1P0CG04 106 aa11.71□□□□□ -0.54
GTF3C1-203ENST00000562609 CA7P43166 264 aa11.71□□□□□ -0.54
GTF3C1-203ENST00000562609 TRIP6Q15654 476 aaKnown RBP11.71□□□□□ -0.54
GTF3C1-203ENST00000562609 IGFBP7Q16270 282 aa11.71□□□□□ -0.54
GTF3C1-203ENST00000562609 PLCXD3Q63HM9 321 aa11.71□□□□□ -0.54
GTF3C1-203ENST00000562609 EBLN2Q6P2I7 272 aa11.71□□□□□ -0.54
GTF3C1-203ENST00000562609 TMEM136Q6ZRR5 245 aa11.71□□□□□ -0.54
GTF3C1-203ENST00000562609 OR1B1Q8NGR6 318 aa11.71□□□□□ -0.54
GTF3C1-203ENST00000562609 GATA2P23769 480 aaPredicted RBP11.7□□□□□ -0.54
GTF3C1-203ENST00000562609 FOXG1P55316 489 aaPredicted RBP11.7□□□□□ -0.54
GTF3C1-203ENST00000562609 SRSF6Q13247 344 aaKnown RBP11.7□□□□□ -0.54
GTF3C1-203ENST00000562609 FAM27BQ5VT28 67 aa11.7□□□□□ -0.54
GTF3C1-203ENST00000562609 WDR73Q6P4I2 378 aa11.7□□□□□ -0.54
GTF3C1-203ENST00000562609 PRSS57Q6UWY2 283 aa11.7□□□□□ -0.54
GTF3C1-203ENST00000562609 OR1N2Q8NGR9 330 aa11.7□□□□□ -0.54
GTF3C1-203ENST00000562609 RP1L1Q8IWN7 2480 aaPredicted RBP11.7□□□□□ -0.54
GTF3C1-203ENST00000562609 A0A096LPE4 126 aa11.69□□□□□ -0.54
GTF3C1-203ENST00000562609 A0A1W2PPZ6 126 aa11.69□□□□□ -0.54
GTF3C1-203ENST00000562609 FAM181BA6NEQ2 426 aa11.69□□□□□ -0.54
GTF3C1-203ENST00000562609 Q6ZS49 121 aa11.69□□□□□ -0.54
GTF3C1-203ENST00000562609 FOXB1Q99853 325 aa11.69□□□□□ -0.54
GTF3C1-203ENST00000562609 TMEM38BQ9NVV0 291 aa11.69□□□□□ -0.54
GTF3C1-203ENST00000562609 BOKQ9UMX3 212 aaPredicted RBP11.69□□□□□ -0.54
GTF3C1-203ENST00000562609 PIGBOS1A0A0B4J2F0 54 aa11.69□□□□□ -0.54
GTF3C1-203ENST00000562609 TTTY12Q9BZ98 90 aa11.69□□□□□ -0.54
GTF3C1-203ENST00000562609 PEF1Q9UBV8 284 aaKnown RBP11.69□□□□□ -0.54
GTF3C1-203ENST00000562609 DCHS1Q96JQ0 3298 aa11.69□□□□□ -0.54
GTF3C1-203ENST00000562609 KIR2DS1A0A191URI9 304 aa11.68□□□□□ -0.54
GTF3C1-203ENST00000562609 A0A1W2PPV4 95 aa11.68□□□□□ -0.54
GTF3C1-203ENST00000562609 GAGE10A6NGK3 116 aa11.68□□□□□ -0.54
GTF3C1-203ENST00000562609 HSBP1O75506 76 aa11.68□□□□□ -0.54
GTF3C1-203ENST00000562609 CCL2P13500 99 aa11.68□□□□□ -0.54
GTF3C1-203ENST00000562609 CCNOP22674 350 aa11.68□□□□□ -0.54
GTF3C1-203ENST00000562609 NPY1RP25929 384 aa11.68□□□□□ -0.54
GTF3C1-203ENST00000562609 OTX1P32242 354 aaPredicted RBP11.68□□□□□ -0.54
GTF3C1-203ENST00000562609 KIR2DS4P43632 304 aa11.68□□□□□ -0.54
GTF3C1-203ENST00000562609 TCL1AP56279 114 aa11.68□□□□□ -0.54
GTF3C1-203ENST00000562609 SELENOVP59797 346 aa11.68□□□□□ -0.54
GTF3C1-203ENST00000562609 UBE2G1P62253 170 aa11.68□□□□□ -0.54
GTF3C1-203ENST00000562609 PLGLB1Q02325 96 aa11.68□□□□□ -0.54
GTF3C1-203ENST00000562609 KIR2DS1Q14954 304 aa11.68□□□□□ -0.54
GTF3C1-203ENST00000562609 TNXAQ16473 311 aa11.68□□□□□ -0.54
GTF3C1-203ENST00000562609 C12orf54Q6X4T0 127 aa11.68□□□□□ -0.54
GTF3C1-203ENST00000562609 TUSC5Q8IXB3 177 aa11.68□□□□□ -0.54
GTF3C1-203ENST00000562609 SPTSSAQ969W0 71 aa11.68□□□□□ -0.54
GTF3C1-203ENST00000562609 CRIM1Q9NZV1 1036 aa11.68□□□□□ -0.54
GTF3C1-203ENST00000562609 PPP1R3CQ9UQK1 317 aa11.68□□□□□ -0.54
GTF3C1-203ENST00000562609 V9GYV3 84 aa11.68□□□□□ -0.54
GTF3C1-203ENST00000562609 AKAP13Q12802 2813 aa11.68□□□□□ -0.54
GTF3C1-203ENST00000562609 CEP250Q9BV73 2442 aa11.68□□□□□ -0.54
GTF3C1-203ENST00000562609 SPAARA0A1B0GVQ0 90 aa11.68□□□□□ -0.54
GTF3C1-203ENST00000562609 M0R2Z0 102 aa11.68□□□□□ -0.54
GTF3C1-203ENST00000562609 LINC00869P0C866 280 aa11.68□□□□□ -0.54
GTF3C1-203ENST00000562609 SSTR5P35346 364 aa11.68□□□□□ -0.54
GTF3C1-203ENST00000562609 TGFBR3Q03167 851 aa11.68□□□□□ -0.54
GTF3C1-203ENST00000562609 FOXL2NBQ6ZUU3 175 aa11.68□□□□□ -0.54
GTF3C1-203ENST00000562609 FAM173AQ9BQD7 235 aa11.68□□□□□ -0.54
GTF3C1-203ENST00000562609 PRR14LQ5THK1 2151 aa11.68□□□□□ -0.54
GTF3C1-203ENST00000562609 LRP5LA4QPB2 252 aa11.68□□□□□ -0.54
GTF3C1-203ENST00000562609 J3QR06 171 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms