RNA–Protein interactions for RNA: ENST00000561235.5

TCF12-223, Transcript of transcription factor 12, human

TSL 4

Gene TCF12, Length 818 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF12-223	ENST00000561235	OR9I1	Q8NGQ6	314 aa		3.38	□□□□□ -1.87
TCF12-223	ENST00000561235	RERG	Q96A58	199 aa	Predicted RBP	3.38	□□□□□ -1.87
TCF12-223	ENST00000561235	YIPF6	Q96EC8	236 aa		3.38	□□□□□ -1.87
TCF12-223	ENST00000561235	MRAP2	Q96G30	205 aa		3.38	□□□□□ -1.87
TCF12-223	ENST00000561235	OR8D2	Q9GZM6	311 aa		3.38	□□□□□ -1.87
TCF12-223	ENST00000561235	LHX9	Q9NQ69	397 aa		3.38	□□□□□ -1.87
TCF12-223	ENST00000561235	HEBP1	Q9NRV9	189 aa		3.38	□□□□□ -1.87
TCF12-223	ENST00000561235	PSG8	Q9UQ74	426 aa		3.38	□□□□□ -1.87
TCF12-223	ENST00000561235	C14orf166	Q9Y224	244 aa	Known RBP	3.38	□□□□□ -1.87
TCF12-223	ENST00000561235	FARSA	Q9Y285	508 aa	Known RBP	3.38	□□□□□ -1.87
TCF12-223	ENST00000561235	LAMA1	P25391	3075 aa		3.38	□□□□□ -1.87
TCF12-223	ENST00000561235	CACNA1D	Q01668	2161 aa		3.38	□□□□□ -1.87
TCF12-223	ENST00000561235	ATG2B	Q96BY7	2078 aa		3.37	□□□□□ -1.87
TCF12-223	ENST00000561235	PLXND1	Q9Y4D7	1925 aa		3.37	□□□□□ -1.87
TCF12-223	ENST00000561235	MEIKIN	A0A087WXM9	373 aa		3.37	□□□□□ -1.87
TCF12-223	ENST00000561235	TCRBV3S1	A0A5B6	114 aa		3.37	□□□□□ -1.87
TCF12-223	ENST00000561235	IFITM5	A6NNB3	132 aa		3.37	□□□□□ -1.87
TCF12-223	ENST00000561235		K7EN84	100 aa		3.37	□□□□□ -1.87
TCF12-223	ENST00000561235	ZNF593	O00488	134 aa	Predicted RBP	3.37	□□□□□ -1.87
TCF12-223	ENST00000561235	SLC31A1	O15431	190 aa		3.37	□□□□□ -1.87
TCF12-223	ENST00000561235	ADAP1	O75689	374 aa		3.37	□□□□□ -1.87
TCF12-223	ENST00000561235	ISG15	P05161	165 aa		3.37	□□□□□ -1.87
TCF12-223	ENST00000561235	SPN	P16150	400 aa		3.37	□□□□□ -1.87
TCF12-223	ENST00000561235	ZNF823	P16415	610 aa		3.37	□□□□□ -1.87
TCF12-223	ENST00000561235	CXCR1	P25024	350 aa		3.37	□□□□□ -1.87
TCF12-223	ENST00000561235	IMPA1	P29218	277 aa		3.37	□□□□□ -1.87
TCF12-223	ENST00000561235	BRS3	P32247	399 aa		3.37	□□□□□ -1.87
TCF12-223	ENST00000561235	RPL22	P35268	128 aa	Known RBP	3.37	□□□□□ -1.87
TCF12-223	ENST00000561235	CKS1B	P61024	79 aa		3.37	□□□□□ -1.87
TCF12-223	ENST00000561235	MAX	P61244	160 aa		3.37	□□□□□ -1.87
TCF12-223	ENST00000561235	HERVK_113	P61574	105 aa		3.37	□□□□□ -1.87
TCF12-223	ENST00000561235	RHOG	P84095	191 aa		3.37	□□□□□ -1.87
TCF12-223	ENST00000561235	EBP	Q15125	230 aa	Known RBP	3.37	□□□□□ -1.87
TCF12-223	ENST00000561235	SURF2	Q15527	256 aa	Predicted RBP	3.37	□□□□□ -1.87
TCF12-223	ENST00000561235	OR7A5	Q15622	319 aa		3.37	□□□□□ -1.87
TCF12-223	ENST00000561235	PRSS8	Q16651	343 aa		3.37	□□□□□ -1.87
TCF12-223	ENST00000561235	FAM74A1	Q5RGS3	127 aa		3.37	□□□□□ -1.87
TCF12-223	ENST00000561235	NCMAP	Q5T1S8	102 aa		3.37	□□□□□ -1.87
TCF12-223	ENST00000561235	C1orf194	Q5T5A4	169 aa		3.37	□□□□□ -1.87
TCF12-223	ENST00000561235	FAM78B	Q5VT40	261 aa		3.37	□□□□□ -1.87
TCF12-223	ENST00000561235	TBPL2	Q6SJ96	375 aa		3.37	□□□□□ -1.87
TCF12-223	ENST00000561235	TMEM251	Q8N6I4	163 aa		3.37	□□□□□ -1.87
TCF12-223	ENST00000561235	ZNF555	Q8NEP9	628 aa		3.37	□□□□□ -1.87
TCF12-223	ENST00000561235	OR10X1	Q8NGY0	326 aa		3.37	□□□□□ -1.87
TCF12-223	ENST00000561235	OR1S1	Q8NH92	325 aa		3.37	□□□□□ -1.87
TCF12-223	ENST00000561235	TNFAIP8L1	Q8WVP5	186 aa		3.37	□□□□□ -1.87
TCF12-223	ENST00000561235	CLDN23	Q96B33	292 aa		3.37	□□□□□ -1.87
TCF12-223	ENST00000561235	CPNE2	Q96FN4	548 aa	Predicted RBP	3.37	□□□□□ -1.87
TCF12-223	ENST00000561235	REEP6	Q96HR9	211 aa		3.37	□□□□□ -1.87
TCF12-223	ENST00000561235	TP53RK	Q96S44	253 aa		3.37	□□□□□ -1.87
TCF12-223	ENST00000561235	CST9L	Q9H4G1	147 aa		3.37	□□□□□ -1.87
TCF12-223	ENST00000561235	PRORY	Q9H606	182 aa		3.37	□□□□□ -1.87
TCF12-223	ENST00000561235	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	3.37	□□□□□ -1.87
TCF12-223	ENST00000561235	MED29	Q9NX70	200 aa		3.37	□□□□□ -1.87
TCF12-223	ENST00000561235	TRAPPC2L	Q9UL33	140 aa		3.37	□□□□□ -1.87
TCF12-223	ENST00000561235	MCTS1	Q9ULC4	181 aa	Known RBP	3.37	□□□□□ -1.87
TCF12-223	ENST00000561235	C2orf16	Q68DN1	1984 aa		3.37	□□□□□ -1.87
TCF12-223	ENST00000561235	BAZ2A	Q9UIF9	1905 aa	Known RBP	3.36	□□□□□ -1.87
TCF12-223	ENST00000561235	ITPR2	Q14571	2701 aa		3.36	□□□□□ -1.87
TCF12-223	ENST00000561235	LRRK2	Q5S007	2527 aa		3.36	□□□□□ -1.87
TCF12-223	ENST00000561235	USP9Y	O00507	2555 aa	Predicted RBP	3.36	□□□□□ -1.87
TCF12-223	ENST00000561235	F8	P00451	2351 aa		3.36	□□□□□ -1.87
TCF12-223	ENST00000561235	BORCS7-ASMT	A0A0B4J1R7	106 aa		3.36	□□□□□ -1.87
TCF12-223	ENST00000561235	IGSF23	A1L1A6	192 aa		3.36	□□□□□ -1.87
TCF12-223	ENST00000561235	INMT-MINDY4	F8WBC2	141 aa		3.36	□□□□□ -1.87
TCF12-223	ENST00000561235	INS-IGF2	F8WCM5	200 aa		3.36	□□□□□ -1.87
TCF12-223	ENST00000561235		H0Y980	276 aa		3.36	□□□□□ -1.87
TCF12-223	ENST00000561235	GPR31	O00270	319 aa		3.36	□□□□□ -1.87
TCF12-223	ENST00000561235	ORM1	P02763	201 aa		3.36	□□□□□ -1.87
TCF12-223	ENST00000561235	BCHE	P06276	602 aa		3.36	□□□□□ -1.87
TCF12-223	ENST00000561235	DBI	P07108	87 aa	Known RBP	3.36	□□□□□ -1.87
TCF12-223	ENST00000561235	NFYA	P23511	347 aa	Predicted RBP	3.36	□□□□□ -1.87
TCF12-223	ENST00000561235	ADORA1	P30542	326 aa		3.36	□□□□□ -1.87
TCF12-223	ENST00000561235	AGTR1	P30556	359 aa		3.36	□□□□□ -1.87
TCF12-223	ENST00000561235	ARL2	P36404	184 aa		3.36	□□□□□ -1.87
TCF12-223	ENST00000561235	FABP6	P51161	128 aa		3.36	□□□□□ -1.87
TCF12-223	ENST00000561235	RND2	P52198	227 aa		3.36	□□□□□ -1.87
TCF12-223	ENST00000561235	ARPP19	P56211	112 aa		3.36	□□□□□ -1.87
TCF12-223	ENST00000561235	CLDN12	P56749	244 aa		3.36	□□□□□ -1.87
TCF12-223	ENST00000561235	SNRPD2	P62316	118 aa	Known RBP	3.36	□□□□□ -1.87
TCF12-223	ENST00000561235	CDK5	Q00535	292 aa		3.36	□□□□□ -1.87
TCF12-223	ENST00000561235	SKP2	Q13309	424 aa		3.36	□□□□□ -1.87
TCF12-223	ENST00000561235	PNOC	Q13519	176 aa		3.36	□□□□□ -1.87
TCF12-223	ENST00000561235	ZNF726P1	Q15940	193 aa		3.36	□□□□□ -1.87
TCF12-223	ENST00000561235	DEFB116	Q30KQ4	102 aa		3.36	□□□□□ -1.87
TCF12-223	ENST00000561235	ARHGAP11B	Q3KRB8	267 aa		3.36	□□□□□ -1.87
TCF12-223	ENST00000561235	LGALSL	Q3ZCW2	172 aa	Predicted RBP	3.36	□□□□□ -1.87
TCF12-223	ENST00000561235	TIMM23B	Q5SRD1	257 aa		3.36	□□□□□ -1.87
TCF12-223	ENST00000561235	DRAM2	Q6UX65	266 aa		3.36	□□□□□ -1.87
TCF12-223	ENST00000561235	TMPPE	Q6ZT21	453 aa		3.36	□□□□□ -1.87
TCF12-223	ENST00000561235	FA2H	Q7L5A8	372 aa		3.36	□□□□□ -1.87
TCF12-223	ENST00000561235	OLIG3	Q7RTU3	272 aa		3.36	□□□□□ -1.87
TCF12-223	ENST00000561235	SPIC	Q8N5J4	248 aa		3.36	□□□□□ -1.87
TCF12-223	ENST00000561235	CHST4	Q8NCG5	386 aa		3.36	□□□□□ -1.87
TCF12-223	ENST00000561235	DEFB124	Q8NES8	71 aa		3.36	□□□□□ -1.87
TCF12-223	ENST00000561235	OR10J6P	Q8NGY7	276 aa		3.36	□□□□□ -1.87
TCF12-223	ENST00000561235	ARL11	Q969Q4	196 aa		3.36	□□□□□ -1.87
TCF12-223	ENST00000561235	BTF3L4	Q96K17	158 aa		3.36	□□□□□ -1.87
TCF12-223	ENST00000561235	ZNF681	Q96N22	645 aa		3.36	□□□□□ -1.87
TCF12-223	ENST00000561235	SCGB3A2	Q96PL1	93 aa		3.36	□□□□□ -1.87

Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms