RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 ZNF486Q96H40 463 aaPredicted RBP12.25□□□□□ -0.45
LMX1B-204ENST00000561065 FKBP11Q9NYL4 201 aa12.25□□□□□ -0.45
LMX1B-204ENST00000561065 RSL24D1Q9UHA3 163 aaKnown RBP12.25□□□□□ -0.45
LMX1B-204ENST00000561065 ZNF257Q9Y2Q1 563 aa12.25□□□□□ -0.45
LMX1B-204ENST00000561065 ATG12O94817 140 aa12.24□□□□□ -0.45
LMX1B-204ENST00000561065 TRBV12-3P01733 135 aa12.24□□□□□ -0.45
LMX1B-204ENST00000561065 HIST1H1BP16401 226 aaKnown RBP12.24□□□□□ -0.45
LMX1B-204ENST00000561065 HLA-GP17693 338 aa12.24□□□□□ -0.45
LMX1B-204ENST00000561065 ATP5G2Q06055 141 aa12.24□□□□□ -0.45
LMX1B-204ENST00000561065 POU2AF1Q16633 256 aa12.24□□□□□ -0.45
LMX1B-204ENST00000561065 C10orf55Q5SWW7 151 aa12.24□□□□□ -0.45
LMX1B-204ENST00000561065 HSD17B13Q7Z5P4 300 aaPredicted RBP12.24□□□□□ -0.45
LMX1B-204ENST00000561065 VKORC1L1Q8N0U8 176 aa12.24□□□□□ -0.45
LMX1B-204ENST00000561065 TMEM229BQ8NBD8 167 aa12.24□□□□□ -0.45
LMX1B-204ENST00000561065 OR52I2Q8NH67 350 aa12.24□□□□□ -0.45
LMX1B-204ENST00000561065 FYTTD1Q96QD9 318 aaKnown RBP12.24□□□□□ -0.45
LMX1B-204ENST00000561065 TSC22D3Q99576 134 aa12.24□□□□□ -0.45
LMX1B-204ENST00000561065 ASCL2Q99929 193 aa12.24□□□□□ -0.45
LMX1B-204ENST00000561065 SRSF8Q9BRL6 282 aaKnown RBP12.24□□□□□ -0.45
LMX1B-204ENST00000561065 C6orf62Q9GZU0 229 aaPredicted RBP12.24□□□□□ -0.45
LMX1B-204ENST00000561065 SLC2A9Q9NRM0 540 aa12.24□□□□□ -0.45
LMX1B-204ENST00000561065 KLK11Q9UBX7 282 aa12.24□□□□□ -0.45
LMX1B-204ENST00000561065 NBEAL2Q6ZNJ1 2754 aa12.24□□□□□ -0.45
LMX1B-204ENST00000561065 CTDSP2O14595 271 aa12.23□□□□□ -0.45
LMX1B-204ENST00000561065 RLN1P04808 185 aa12.23□□□□□ -0.45
LMX1B-204ENST00000561065 DEFA4P12838 97 aa12.23□□□□□ -0.45
LMX1B-204ENST00000561065 IL18Q14116 193 aa12.23□□□□□ -0.45
LMX1B-204ENST00000561065 MEF2DQ14814 521 aa12.23□□□□□ -0.45
LMX1B-204ENST00000561065 OR4A47Q6IF82 309 aa12.23□□□□□ -0.45
LMX1B-204ENST00000561065 NECAP1Q8NC96 275 aa12.23□□□□□ -0.45
LMX1B-204ENST00000561065 ADAD2Q8NCV1 583 aaKnown RBP12.23□□□□□ -0.45
LMX1B-204ENST00000561065 DYNC2LI1Q8TCX1 351 aa12.23□□□□□ -0.45
LMX1B-204ENST00000561065 ISOC1Q96CN7 298 aa12.23□□□□□ -0.45
LMX1B-204ENST00000561065 OR4C12Q96R67 309 aa12.23□□□□□ -0.45
LMX1B-204ENST00000561065 ABHD1Q96SE0 405 aa12.23□□□□□ -0.45
LMX1B-204ENST00000561065 RSRP1Q9BUV0 290 aa12.23□□□□□ -0.45
LMX1B-204ENST00000561065 THYN1Q9P016 225 aa12.23□□□□□ -0.45
LMX1B-204ENST00000561065 PEF1Q9UBV8 284 aaKnown RBP12.23□□□□□ -0.45
LMX1B-204ENST00000561065 ANKRD34BA5PLL1 514 aa12.22□□□□□ -0.45
LMX1B-204ENST00000561065 CTDSPLO15194 276 aa12.22□□□□□ -0.45
LMX1B-204ENST00000561065 SERPINE2P07093 398 aa12.22□□□□□ -0.45
LMX1B-204ENST00000561065 PGAM2P15259 253 aa12.22□□□□□ -0.45
LMX1B-204ENST00000561065 S100A5P33763 92 aa12.22□□□□□ -0.45
LMX1B-204ENST00000561065 LPAR6P43657 344 aa12.22□□□□□ -0.45
LMX1B-204ENST00000561065 BRWD1-AS2P59051 145 aa12.22□□□□□ -0.45
LMX1B-204ENST00000561065 WWC2-AS2Q96NR7 200 aa12.22□□□□□ -0.45
LMX1B-204ENST00000561065 GPHA2Q96T91 129 aa12.22□□□□□ -0.45
LMX1B-204ENST00000561065 DYNC2H1Q8NCM8 4307 aaKnown RBP12.22□□□□□ -0.45
LMX1B-204ENST00000561065 MARCH11A6NNE9 402 aa12.21□□□□□ -0.45
LMX1B-204ENST00000561065 NPIPB5A8MRT5 1133 aa12.21□□□□□ -0.45
LMX1B-204ENST00000561065 DISC1C4P0D8 188 aa12.21□□□□□ -0.45
LMX1B-204ENST00000561065 H3BMQ9 156 aa12.21□□□□□ -0.45
LMX1B-204ENST00000561065 UPK2O00526 184 aa12.21□□□□□ -0.45
LMX1B-204ENST00000561065 B3GALNT1O75752 331 aa12.21□□□□□ -0.45
LMX1B-204ENST00000561065 RAB3DO95716 219 aa12.21□□□□□ -0.45
LMX1B-204ENST00000561065 CD3DP04234 171 aa12.21□□□□□ -0.45
LMX1B-204ENST00000561065 ZNF735P0CB33 412 aa12.21□□□□□ -0.45
LMX1B-204ENST00000561065 GP9P14770 177 aa12.21□□□□□ -0.45
LMX1B-204ENST00000561065 RPA2P15927 270 aa12.21□□□□□ -0.45
LMX1B-204ENST00000561065 RHOGP84095 191 aa12.21□□□□□ -0.45
LMX1B-204ENST00000561065 ZNF45Q02386 682 aa12.21□□□□□ -0.45
LMX1B-204ENST00000561065 STEAP1BQ6NZ63 245 aa12.21□□□□□ -0.45
LMX1B-204ENST00000561065 ZNF343Q6P1L6 599 aa12.21□□□□□ -0.45
LMX1B-204ENST00000561065 CCDC71LQ8N9Z2 235 aa12.21□□□□□ -0.45
LMX1B-204ENST00000561065 TERB2Q8NHR7 220 aa12.21□□□□□ -0.45
LMX1B-204ENST00000561065 MCFD2Q8NI22 146 aa12.21□□□□□ -0.45
LMX1B-204ENST00000561065 SMAD5-AS1Q9Y6J3 95 aa12.21□□□□□ -0.45
LMX1B-204ENST00000561065 U3KQK5 164 aa12.21□□□□□ -0.45
LMX1B-204ENST00000561065 FABP12A6NFH5 140 aa12.2□□□□□ -0.46
LMX1B-204ENST00000561065 M0QYG6 137 aa12.2□□□□□ -0.46
LMX1B-204ENST00000561065 KRASP01116 189 aa12.2□□□□□ -0.46
LMX1B-204ENST00000561065 PRH1P02810 166 aa12.2□□□□□ -0.46
LMX1B-204ENST00000561065 NHLRC4P0CG21 123 aaPredicted RBP12.2□□□□□ -0.46
LMX1B-204ENST00000561065 PHLDA2Q53GA4 152 aa12.2□□□□□ -0.46
LMX1B-204ENST00000561065 RNASE12Q5GAN4 147 aaKnown RBP12.2□□□□□ -0.46
LMX1B-204ENST00000561065 C19orf35Q6ZS72 473 aa12.2□□□□□ -0.46
LMX1B-204ENST00000561065 LAX1Q8IWV1 398 aa12.2□□□□□ -0.46
LMX1B-204ENST00000561065 OR6Q1Q8NGQ2 317 aa12.2□□□□□ -0.46
LMX1B-204ENST00000561065 OR1L8Q8NGR8 309 aa12.2□□□□□ -0.46
LMX1B-204ENST00000561065 TMEM56Q96MV1 263 aa12.2□□□□□ -0.46
LMX1B-204ENST00000561065 SCGB3A2Q96PL1 93 aa12.2□□□□□ -0.46
LMX1B-204ENST00000561065 MIXL1Q9H2W2 232 aa12.2□□□□□ -0.46
LMX1B-204ENST00000561065 TMEM140Q9NV12 185 aa12.2□□□□□ -0.46
LMX1B-204ENST00000561065 COPZ2Q9P299 210 aa12.2□□□□□ -0.46
LMX1B-204ENST00000561065 PRNDQ9UKY0 176 aa12.2□□□□□ -0.46
LMX1B-204ENST00000561065 A0A1B0GW64 132 aa12.19□□□□□ -0.46
LMX1B-204ENST00000561065 ZNF701M0R085 212 aaPredicted RBP12.19□□□□□ -0.46
LMX1B-204ENST00000561065 S1PR2O95136 353 aa12.19□□□□□ -0.46
LMX1B-204ENST00000561065 IGLV1-51P01701 117 aa12.19□□□□□ -0.46
LMX1B-204ENST00000561065 AKAIN1P0CW23 69 aa12.19□□□□□ -0.46
LMX1B-204ENST00000561065 TRAPPC2P0DI81 140 aa12.19□□□□□ -0.46
LMX1B-204ENST00000561065 TRAPPC2BP0DI82 140 aa12.19□□□□□ -0.46
LMX1B-204ENST00000561065 PSMB6P28072 239 aa12.19□□□□□ -0.46
LMX1B-204ENST00000561065 KLF5Q13887 457 aaPredicted RBP12.19□□□□□ -0.46
LMX1B-204ENST00000561065 RPEL1Q2QD12 228 aa12.19□□□□□ -0.46
LMX1B-204ENST00000561065 IL34Q6ZMJ4 242 aa12.19□□□□□ -0.46
LMX1B-204ENST00000561065 TBC1D26Q86UD7 250 aa12.19□□□□□ -0.46
LMX1B-204ENST00000561065 OR1L6Q8NGR2 347 aa12.19□□□□□ -0.46
LMX1B-204ENST00000561065 SMIM4Q8WVI0 70 aa12.19□□□□□ -0.46
LMX1B-204ENST00000561065 QTRT1Q9BXR0 403 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms