RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 RPA2P15927 270 aa11.79□□□□□ -0.52
SNRPA1-213ENST00000560856 CD40LGP29965 261 aa11.79□□□□□ -0.52
SNRPA1-213ENST00000560856 ZNF45Q02386 682 aa11.79□□□□□ -0.52
SNRPA1-213ENST00000560856 ZNF616Q08AN1 781 aa11.79□□□□□ -0.52
SNRPA1-213ENST00000560856 MEF2DQ14814 521 aa11.79□□□□□ -0.52
SNRPA1-213ENST00000560856 OR13C8Q8NGS7 320 aa11.79□□□□□ -0.52
SNRPA1-213ENST00000560856 TRIM63Q969Q1 353 aa11.79□□□□□ -0.52
SNRPA1-213ENST00000560856 HRASLSQ9HDD0 168 aa11.79□□□□□ -0.52
SNRPA1-213ENST00000560856 ZNF355PQ9NSJ1 428 aa11.79□□□□□ -0.52
SNRPA1-213ENST00000560856 IGHV4OR15-8A0A075B7B6 117 aa11.78□□□□□ -0.52
SNRPA1-213ENST00000560856 A0A087WW49 117 aa11.78□□□□□ -0.52
SNRPA1-213ENST00000560856 DUS4LO95620 317 aaKnown RBP11.78□□□□□ -0.52
SNRPA1-213ENST00000560856 KRASP01116 189 aa11.78□□□□□ -0.52
SNRPA1-213ENST00000560856 PGAM2P15259 253 aa11.78□□□□□ -0.52
SNRPA1-213ENST00000560856 ETV6P41212 452 aa11.78□□□□□ -0.52
SNRPA1-213ENST00000560856 PPP5CP53041 499 aa11.78□□□□□ -0.52
SNRPA1-213ENST00000560856 PIGPP57054 158 aa11.78□□□□□ -0.52
SNRPA1-213ENST00000560856 OR2B8PP59922 312 aa11.78□□□□□ -0.52
SNRPA1-213ENST00000560856 DEFA5Q01523 94 aa11.78□□□□□ -0.52
SNRPA1-213ENST00000560856 KLK9Q2XQG4 91 aa11.78□□□□□ -0.52
SNRPA1-213ENST00000560856 DMBX1Q8NFW5 382 aa11.78□□□□□ -0.52
SNRPA1-213ENST00000560856 MARCH1Q8TCQ1 289 aa11.78□□□□□ -0.52
SNRPA1-213ENST00000560856 SEC22AQ96IW7 307 aa11.78□□□□□ -0.52
SNRPA1-213ENST00000560856 THAP7Q9BT49 309 aaPredicted RBP11.78□□□□□ -0.52
SNRPA1-213ENST00000560856 COA4Q9NYJ1 87 aa11.78□□□□□ -0.52
SNRPA1-213ENST00000560856 NDUFA13Q9P0J0 144 aa11.78□□□□□ -0.52
SNRPA1-213ENST00000560856 KLK9Q9UKQ9 250 aa11.78□□□□□ -0.52
SNRPA1-213ENST00000560856 PRH1P02810 166 aa11.77□□□□□ -0.53
SNRPA1-213ENST00000560856 PRB2P02812 416 aaPredicted RBP11.77□□□□□ -0.53
SNRPA1-213ENST00000560856 CRYGCP07315 174 aa11.77□□□□□ -0.53
SNRPA1-213ENST00000560856 CTSDP07339 412 aaPredicted RBP11.77□□□□□ -0.53
SNRPA1-213ENST00000560856 AREGP15514 252 aa11.77□□□□□ -0.53
SNRPA1-213ENST00000560856 S100GP29377 79 aa11.77□□□□□ -0.53
SNRPA1-213ENST00000560856 G6PCP35575 357 aa11.77□□□□□ -0.53
SNRPA1-213ENST00000560856 SCGB2B2Q4G0G5 96 aa11.77□□□□□ -0.53
SNRPA1-213ENST00000560856 C19orf35Q6ZS72 473 aa11.77□□□□□ -0.53
SNRPA1-213ENST00000560856 OR6Q1Q8NGQ2 317 aa11.77□□□□□ -0.53
SNRPA1-213ENST00000560856 ZFAND1Q8TCF1 268 aa11.77□□□□□ -0.53
SNRPA1-213ENST00000560856 FANCD2OSQ96PS1 177 aa11.77□□□□□ -0.53
SNRPA1-213ENST00000560856 FYTTD1Q96QD9 318 aaKnown RBP11.77□□□□□ -0.53
SNRPA1-213ENST00000560856 RTBDNQ9BSG5 229 aaPredicted RBP11.77□□□□□ -0.53
SNRPA1-213ENST00000560856 SLC2A8Q9NY64 477 aa11.77□□□□□ -0.53
SNRPA1-213ENST00000560856 A0A0G2JLM5 398 aa11.76□□□□□ -0.53
SNRPA1-213ENST00000560856 IGLC7A0M8Q6 106 aa11.76□□□□□ -0.53
SNRPA1-213ENST00000560856 NPIPB5A8MRT5 1133 aa11.76□□□□□ -0.53
SNRPA1-213ENST00000560856 DISC1C4P0D8 188 aa11.76□□□□□ -0.53
SNRPA1-213ENST00000560856 LINC01619G3V211 115 aa11.76□□□□□ -0.53
SNRPA1-213ENST00000560856 HSPB1P04792 205 aaKnown RBP11.76□□□□□ -0.53
SNRPA1-213ENST00000560856 OR8U8P0C7N1 319 aa11.76□□□□□ -0.53
SNRPA1-213ENST00000560856 CTRB1P17538 263 aa11.76□□□□□ -0.53
SNRPA1-213ENST00000560856 S100A5P33763 92 aa11.76□□□□□ -0.53
SNRPA1-213ENST00000560856 RAB25P57735 213 aa11.76□□□□□ -0.53
SNRPA1-213ENST00000560856 KRTAP10-11P60412 298 aa11.76□□□□□ -0.53
SNRPA1-213ENST00000560856 ERVK-16P61578 105 aa11.76□□□□□ -0.53
SNRPA1-213ENST00000560856 EGFEM1PQ0D2K5 195 aa11.76□□□□□ -0.53
SNRPA1-213ENST00000560856 KLF9Q13886 244 aaPredicted RBP11.76□□□□□ -0.53
SNRPA1-213ENST00000560856 PDLIM3Q53GG5 364 aaPredicted RBP11.76□□□□□ -0.53
SNRPA1-213ENST00000560856 CTRB2Q6GPI1 263 aa11.76□□□□□ -0.53
SNRPA1-213ENST00000560856 ZNF343Q6P1L6 599 aa11.76□□□□□ -0.53
SNRPA1-213ENST00000560856 OR51S1Q8NGJ8 323 aa11.76□□□□□ -0.53
SNRPA1-213ENST00000560856 DCUN1D4Q92564 292 aa11.76□□□□□ -0.53
SNRPA1-213ENST00000560856 USMG5Q96IX5 58 aa11.76□□□□□ -0.53
SNRPA1-213ENST00000560856 TP53RKQ96S44 253 aa11.76□□□□□ -0.53
SNRPA1-213ENST00000560856 MCRIP2Q9BUT9 160 aaKnown RBP11.76□□□□□ -0.53
SNRPA1-213ENST00000560856 C5orf66Q9H5L9 145 aa11.76□□□□□ -0.53
SNRPA1-213ENST00000560856 AKIP1Q9NQ31 210 aa11.76□□□□□ -0.53
SNRPA1-213ENST00000560856 GPR132Q9UNW8 380 aa11.76□□□□□ -0.53
SNRPA1-213ENST00000560856 ZNF257Q9Y2Q1 563 aa11.76□□□□□ -0.53
SNRPA1-213ENST00000560856 NSG2Q9Y328 171 aa11.76□□□□□ -0.53
SNRPA1-213ENST00000560856 TEX50A0A1B0GTY4 177 aa11.75□□□□□ -0.53
SNRPA1-213ENST00000560856 C13orf42A0A1B0GVH6 325 aa11.75□□□□□ -0.53
SNRPA1-213ENST00000560856 DBX1A6NMT0 343 aa11.75□□□□□ -0.53
SNRPA1-213ENST00000560856 H0Y980 276 aa11.75□□□□□ -0.53
SNRPA1-213ENST00000560856 P0C879 139 aa11.75□□□□□ -0.53
SNRPA1-213ENST00000560856 PSMB6P28072 239 aa11.75□□□□□ -0.53
SNRPA1-213ENST00000560856 SLURP1P55000 103 aa11.75□□□□□ -0.53
SNRPA1-213ENST00000560856 RHOGP84095 191 aa11.75□□□□□ -0.53
SNRPA1-213ENST00000560856 SURF2Q15527 256 aaPredicted RBP11.75□□□□□ -0.53
SNRPA1-213ENST00000560856 PYDC2Q56P42 97 aa11.75□□□□□ -0.53
SNRPA1-213ENST00000560856 SLC25A42Q86VD7 318 aa11.75□□□□□ -0.53
SNRPA1-213ENST00000560856 Q8N402 240 aa11.75□□□□□ -0.53
SNRPA1-213ENST00000560856 DPF1Q92782 380 aa11.75□□□□□ -0.53
SNRPA1-213ENST00000560856 DLX4Q92988 240 aaPredicted RBP11.75□□□□□ -0.53
SNRPA1-213ENST00000560856 NDUFA4L2Q9NRX3 87 aa11.75□□□□□ -0.53
SNRPA1-213ENST00000560856 FAM223BA6NKX1 122 aa11.74□□□□□ -0.53
SNRPA1-213ENST00000560856 TRBV12-3P01733 135 aa11.74□□□□□ -0.53
SNRPA1-213ENST00000560856 HOXD3P31249 432 aaPredicted RBP11.74□□□□□ -0.53
SNRPA1-213ENST00000560856 ECI1P42126 302 aa11.74□□□□□ -0.53
SNRPA1-213ENST00000560856 FAM223AQ8IWN6 122 aa11.74□□□□□ -0.53
SNRPA1-213ENST00000560856 GDPD1Q8N9F7 314 aa11.74□□□□□ -0.53
SNRPA1-213ENST00000560856 OR10W1Q8NGF6 305 aa11.74□□□□□ -0.53
SNRPA1-213ENST00000560856 PRRT1Q99946 306 aa11.74□□□□□ -0.53
SNRPA1-213ENST00000560856 SRSF8Q9BRL6 282 aaKnown RBP11.74□□□□□ -0.53
SNRPA1-213ENST00000560856 QTRT1Q9BXR0 403 aaKnown RBP11.74□□□□□ -0.53
SNRPA1-213ENST00000560856 COMMD5Q9GZQ3 224 aa11.74□□□□□ -0.53
SNRPA1-213ENST00000560856 SRRQ9GZT4 340 aa11.74□□□□□ -0.53
SNRPA1-213ENST00000560856 TMEM14BQ9NUH8 114 aa11.74□□□□□ -0.53
SNRPA1-213ENST00000560856 COPZ2Q9P299 210 aa11.74□□□□□ -0.53
SNRPA1-213ENST00000560856 DMRT1Q9Y5R6 373 aa11.74□□□□□ -0.53
SNRPA1-213ENST00000560856 C3orf85A0A1B0GTC6 90 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms