RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 FAM90A15PP0C7V4 464 aa11.87□□□□□ -0.51
CSPG4P12-202ENST00000559989 FAM90A13PP0C7W8 464 aa11.87□□□□□ -0.51
CSPG4P12-202ENST00000559989 FAM90A14PP0C7W9 464 aa11.87□□□□□ -0.51
CSPG4P12-202ENST00000559989 FAM90A24PP0C7X0 464 aa11.87□□□□□ -0.51
CSPG4P12-202ENST00000559989 ABHD12Q8N2K0 398 aa11.87□□□□□ -0.51
CSPG4P12-202ENST00000559989 CIARTQ8N365 385 aaPredicted RBP11.87□□□□□ -0.51
CSPG4P12-202ENST00000559989 CLEC7AQ9BXN2 247 aa11.87□□□□□ -0.51
CSPG4P12-202ENST00000559989 PPIAL4CA0A0B4J2A2 164 aa11.86□□□□□ -0.51
CSPG4P12-202ENST00000559989 PPIAL4GP0DN37 164 aa11.86□□□□□ -0.51
CSPG4P12-202ENST00000559989 ESDP10768 282 aa11.86□□□□□ -0.51
CSPG4P12-202ENST00000559989 PDLIM4P50479 330 aa11.86□□□□□ -0.51
CSPG4P12-202ENST00000559989 ORMDL2Q53FV1 153 aa11.86□□□□□ -0.51
CSPG4P12-202ENST00000559989 CT83Q5H943 113 aa11.86□□□□□ -0.51
CSPG4P12-202ENST00000559989 LINC01549A6NIU2 74 aa11.86□□□□□ -0.51
CSPG4P12-202ENST00000559989 ZFP36L2P47974 494 aaKnown RBP11.86□□□□□ -0.51
CSPG4P12-202ENST00000559989 CCL8P80075 99 aa11.86□□□□□ -0.51
CSPG4P12-202ENST00000559989 HSD52Q0P140 79 aa11.86□□□□□ -0.51
CSPG4P12-202ENST00000559989 C2orf68Q2NKX9 166 aa11.86□□□□□ -0.51
CSPG4P12-202ENST00000559989 C1QL1O75973 258 aa11.86□□□□□ -0.51
CSPG4P12-202ENST00000559989 RIPPLY2Q5TAB7 128 aa11.86□□□□□ -0.51
CSPG4P12-202ENST00000559989 Q6ZNB5 142 aa11.86□□□□□ -0.51
CSPG4P12-202ENST00000559989 GDF15Q99988 308 aa11.86□□□□□ -0.51
CSPG4P12-202ENST00000559989 TLNRD1Q9H1K6 362 aa11.86□□□□□ -0.51
CSPG4P12-202ENST00000559989 LIFP15018 202 aa11.86□□□□□ -0.51
CSPG4P12-202ENST00000559989 OR52E5Q8NH55 327 aa11.86□□□□□ -0.51
CSPG4P12-202ENST00000559989 GATAD1Q8WUU5 269 aa11.86□□□□□ -0.51
CSPG4P12-202ENST00000559989 ZNF479Q96JC4 524 aa11.86□□□□□ -0.51
CSPG4P12-202ENST00000559989 ZNHIT1O43257 154 aa11.86□□□□□ -0.51
CSPG4P12-202ENST00000559989 ZG16O60844 167 aa11.86□□□□□ -0.51
CSPG4P12-202ENST00000559989 IL11P20809 199 aa11.86□□□□□ -0.51
CSPG4P12-202ENST00000559989 C9orf153Q5TBE3 101 aa11.86□□□□□ -0.51
CSPG4P12-202ENST00000559989 JPT1Q9UK76 154 aa11.86□□□□□ -0.51
CSPG4P12-202ENST00000559989 IGHV1OR21-1A0A087WYE8 117 aa11.85□□□□□ -0.51
CSPG4P12-202ENST00000559989 GZMBP10144 247 aa11.85□□□□□ -0.51
CSPG4P12-202ENST00000559989 MAFAQ8NHW3 353 aaPredicted RBP11.85□□□□□ -0.51
CSPG4P12-202ENST00000559989 SIGLEC14Q08ET2 396 aa11.85□□□□□ -0.51
CSPG4P12-202ENST00000559989 C2orf82Q6UX34 121 aa11.85□□□□□ -0.51
CSPG4P12-202ENST00000559989 FXYD1O00168 92 aa11.85□□□□□ -0.51
CSPG4P12-202ENST00000559989 LINC01559Q495D7 138 aa11.85□□□□□ -0.51
CSPG4P12-202ENST00000559989 DCAF12L2Q5VW00 463 aa11.85□□□□□ -0.51
CSPG4P12-202ENST00000559989 PRDM13Q9H4Q3 707 aa11.85□□□□□ -0.51
CSPG4P12-202ENST00000559989 NBEAP1P0C6P0 100 aa11.85□□□□□ -0.51
CSPG4P12-202ENST00000559989 ZNF79Q15937 498 aa11.85□□□□□ -0.51
CSPG4P12-202ENST00000559989 TCRBV5S1A1TA0A578 114 aa11.85□□□□□ -0.51
CSPG4P12-202ENST00000559989 PRTN3P24158 256 aa11.85□□□□□ -0.51
CSPG4P12-202ENST00000559989 H3BTX0 84 aa11.85□□□□□ -0.51
CSPG4P12-202ENST00000559989 PLA2G10O15496 165 aa11.85□□□□□ -0.51
CSPG4P12-202ENST00000559989 CT62P0C5K7 136 aa11.85□□□□□ -0.51
CSPG4P12-202ENST00000559989 C16orf47Q6ZP98 133 aaPredicted RBP11.85□□□□□ -0.51
CSPG4P12-202ENST00000559989 SPANXDQ9BXN6 97 aa11.85□□□□□ -0.51
CSPG4P12-202ENST00000559989 FANCMQ8IYD8 2048 aa11.85□□□□□ -0.51
CSPG4P12-202ENST00000559989 IL6RP08887 468 aaPredicted RBP11.84□□□□□ -0.51
CSPG4P12-202ENST00000559989 FUT5Q11128 374 aa11.84□□□□□ -0.51
CSPG4P12-202ENST00000559989 CBLN3Q6UW01 205 aa11.84□□□□□ -0.51
CSPG4P12-202ENST00000559989 PRSS41Q7RTY9 318 aa11.84□□□□□ -0.51
CSPG4P12-202ENST00000559989 SEPSECSQ9HD40 501 aaKnown RBP11.84□□□□□ -0.51
CSPG4P12-202ENST00000559989 A0A087WWC5 75 aa11.84□□□□□ -0.51
CSPG4P12-202ENST00000559989 INS-IGF2F8WCM5 200 aa11.84□□□□□ -0.51
CSPG4P12-202ENST00000559989 GFRA3O60609 400 aa11.84□□□□□ -0.51
CSPG4P12-202ENST00000559989 INSP01308 110 aa11.84□□□□□ -0.51
CSPG4P12-202ENST00000559989 FSTP19883 344 aa11.84□□□□□ -0.51
CSPG4P12-202ENST00000559989 FAM19A2Q8N3H0 131 aa11.84□□□□□ -0.51
CSPG4P12-202ENST00000559989 SAXO1Q8IYX7 474 aa11.84□□□□□ -0.51
CSPG4P12-202ENST00000559989 APCDD1LQ8NCL9 501 aa11.84□□□□□ -0.51
CSPG4P12-202ENST00000559989 GPR132Q9UNW8 380 aa11.84□□□□□ -0.51
CSPG4P12-202ENST00000559989 PTP4A3O75365 173 aa11.84□□□□□ -0.51
CSPG4P12-202ENST00000559989 PEAR1Q5VY43 1037 aaPredicted RBP11.84□□□□□ -0.51
CSPG4P12-202ENST00000559989 UBE2DNLQ8IWF7 75 aa11.84□□□□□ -0.51
CSPG4P12-202ENST00000559989 IGHV3-66A0A0C4DH42 116 aa11.84□□□□□ -0.51
CSPG4P12-202ENST00000559989 HIGD1CA8MV81 97 aa11.84□□□□□ -0.51
CSPG4P12-202ENST00000559989 CHCHD1Q96BP2 118 aaKnown RBP11.84□□□□□ -0.51
CSPG4P12-202ENST00000559989 ZNF385AQ96PM9 386 aaKnown RBP11.84□□□□□ -0.51
CSPG4P12-202ENST00000559989 ASCL2Q99929 193 aa11.84□□□□□ -0.51
CSPG4P12-202ENST00000559989 CD7P09564 240 aa11.84□□□□□ -0.51
CSPG4P12-202ENST00000559989 ARPC1AQ92747 370 aa11.84□□□□□ -0.51
CSPG4P12-202ENST00000559989 TNFRSF14Q92956 283 aa11.84□□□□□ -0.51
CSPG4P12-202ENST00000559989 HS3ST3B1Q9Y662 390 aa11.84□□□□□ -0.51
CSPG4P12-202ENST00000559989 RREB1Q92766 1687 aa11.84□□□□□ -0.51
CSPG4P12-202ENST00000559989 PTGDSP41222 190 aa11.84□□□□□ -0.51
CSPG4P12-202ENST00000559989 NPIPB3Q92617 1050 aa11.84□□□□□ -0.51
CSPG4P12-202ENST00000559989 TMEM196Q5HYL7 178 aa11.83□□□□□ -0.52
CSPG4P12-202ENST00000559989 JMJD8Q96S16 334 aa11.83□□□□□ -0.52
CSPG4P12-202ENST00000559989 FOXH1O75593 365 aa11.83□□□□□ -0.52
CSPG4P12-202ENST00000559989 WNT2BQ93097 391 aa11.83□□□□□ -0.52
CSPG4P12-202ENST00000559989 OR9G1Q8NH87 305 aa11.83□□□□□ -0.52
CSPG4P12-202ENST00000559989 ANAPC10Q9UM13 185 aa11.83□□□□□ -0.52
CSPG4P12-202ENST00000559989 C1orf210Q8IVY1 113 aa11.83□□□□□ -0.52
CSPG4P12-202ENST00000559989 TPRX1Q8N7U7 411 aa11.83□□□□□ -0.52
CSPG4P12-202ENST00000559989 DLX4Q92988 240 aaPredicted RBP11.83□□□□□ -0.52
CSPG4P12-202ENST00000559989 TRGV4A0A0C4DH28 118 aa11.83□□□□□ -0.52
CSPG4P12-202ENST00000559989 LEPROTO15243 131 aa11.83□□□□□ -0.52
CSPG4P12-202ENST00000559989 FDCSPQ8NFU4 85 aa11.83□□□□□ -0.52
CSPG4P12-202ENST00000559989 TRAV9-2A0A087WT02 112 aa11.83□□□□□ -0.52
CSPG4P12-202ENST00000559989 KLF4O43474 513 aa11.83□□□□□ -0.52
CSPG4P12-202ENST00000559989 MOSP00540 346 aa11.83□□□□□ -0.52
CSPG4P12-202ENST00000559989 IGLV3-25P01717 112 aa11.83□□□□□ -0.52
CSPG4P12-202ENST00000559989 H3BMM0 161 aa11.82□□□□□ -0.52
CSPG4P12-202ENST00000559989 ZP4Q12836 540 aa11.82□□□□□ -0.52
CSPG4P12-202ENST00000559989 OR10W1Q8NGF6 305 aa11.82□□□□□ -0.52
CSPG4P12-202ENST00000559989 ITLN1Q8WWA0 313 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms