RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 RBMXL2O75526 392 aaKnown RBP6.29□□□□□ -1.4
SNX1-207ENST00000559401 BRI3O95415 125 aa6.29□□□□□ -1.4
SNX1-207ENST00000559401 KRASP01116 189 aa6.29□□□□□ -1.4
SNX1-207ENST00000559401 IGHV3-23P01764 117 aa6.29□□□□□ -1.4
SNX1-207ENST00000559401 CD3DP04234 171 aa6.29□□□□□ -1.4
SNX1-207ENST00000559401 ZNF735P0CB33 412 aa6.29□□□□□ -1.4
SNX1-207ENST00000559401 SPNP16150 400 aa6.29□□□□□ -1.4
SNX1-207ENST00000559401 PSMB6P28072 239 aa6.29□□□□□ -1.4
SNX1-207ENST00000559401 LPAR6P43657 344 aa6.29□□□□□ -1.4
SNX1-207ENST00000559401 PPP5CP53041 499 aa6.29□□□□□ -1.4
SNX1-207ENST00000559401 ZNF45Q02386 682 aa6.29□□□□□ -1.4
SNX1-207ENST00000559401 TATDN3Q17R31 274 aa6.29□□□□□ -1.4
SNX1-207ENST00000559401 C15orf32Q32M92 178 aa6.29□□□□□ -1.4
SNX1-207ENST00000559401 ZNF343Q6P1L6 599 aa6.29□□□□□ -1.4
SNX1-207ENST00000559401 TBC1D26Q86UD7 250 aa6.29□□□□□ -1.4
SNX1-207ENST00000559401 LAX1Q8IWV1 398 aa6.29□□□□□ -1.4
SNX1-207ENST00000559401 OR52I2Q8NH67 350 aa6.29□□□□□ -1.4
SNX1-207ENST00000559401 C15orf40Q8WUR7 153 aa6.29□□□□□ -1.4
SNX1-207ENST00000559401 FCAMRQ8WWV6 532 aa6.29□□□□□ -1.4
SNX1-207ENST00000559401 DGCR14Q96DF8 476 aaKnown RBP6.29□□□□□ -1.4
SNX1-207ENST00000559401 C6orf62Q9GZU0 229 aaPredicted RBP6.29□□□□□ -1.4
SNX1-207ENST00000559401 SLC2A9Q9NRM0 540 aa6.29□□□□□ -1.4
SNX1-207ENST00000559401 KLK11Q9UBX7 282 aa6.29□□□□□ -1.4
SNX1-207ENST00000559401 S4R3C0 116 aa6.29□□□□□ -1.4
SNX1-207ENST00000559401 TRBV9A0A0B4J1U6 114 aa6.28□□□□□ -1.4
SNX1-207ENST00000559401 CCDC160A6NGH7 325 aa6.28□□□□□ -1.4
SNX1-207ENST00000559401 NPIPB5A8MRT5 1133 aa6.28□□□□□ -1.4
SNX1-207ENST00000559401 CTDSP2O14595 271 aa6.28□□□□□ -1.4
SNX1-207ENST00000559401 SNAPC5O75971 98 aa6.28□□□□□ -1.4
SNX1-207ENST00000559401 GP9P14770 177 aa6.28□□□□□ -1.4
SNX1-207ENST00000559401 G6PCP35575 357 aa6.28□□□□□ -1.4
SNX1-207ENST00000559401 RPL5P46777 297 aaKnown RBP6.28□□□□□ -1.4
SNX1-207ENST00000559401 MECP2P51608 486 aaKnown RBP6.28□□□□□ -1.4
SNX1-207ENST00000559401 TMBIM6P55061 237 aa6.28□□□□□ -1.4
SNX1-207ENST00000559401 OR2B8PP59922 312 aa6.28□□□□□ -1.4
SNX1-207ENST00000559401 IL18Q14116 193 aa6.28□□□□□ -1.4
SNX1-207ENST00000559401 POU2AF1Q16633 256 aa6.28□□□□□ -1.4
SNX1-207ENST00000559401 SCGB2B2Q4G0G5 96 aa6.28□□□□□ -1.4
SNX1-207ENST00000559401 VAX1Q5SQQ9 334 aa6.28□□□□□ -1.4
SNX1-207ENST00000559401 C11orf87Q6NUJ2 197 aa6.28□□□□□ -1.4
SNX1-207ENST00000559401 SLC38A6Q8IZM9 456 aa6.28□□□□□ -1.4
SNX1-207ENST00000559401 OR9G4Q8NGQ1 327 aa6.28□□□□□ -1.4
SNX1-207ENST00000559401 DIRAS2Q96HU8 199 aa6.28□□□□□ -1.4
SNX1-207ENST00000559401 ABHD1Q96SE0 405 aa6.28□□□□□ -1.4
SNX1-207ENST00000559401 B9D2Q9BPU9 175 aa6.28□□□□□ -1.4
SNX1-207ENST00000559401 QTRT1Q9BXR0 403 aaKnown RBP6.28□□□□□ -1.4
SNX1-207ENST00000559401 MIXL1Q9H2W2 232 aa6.28□□□□□ -1.4
SNX1-207ENST00000559401 CCDC59Q9P031 241 aaKnown RBP6.28□□□□□ -1.4
SNX1-207ENST00000559401 PEMTQ9UBM1 199 aa6.28□□□□□ -1.4
SNX1-207ENST00000559401 NSG2Q9Y328 171 aa6.28□□□□□ -1.4
SNX1-207ENST00000559401 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.27□□□□□ -1.41
SNX1-207ENST00000559401 A0A1B0GW64 132 aa6.27□□□□□ -1.41
SNX1-207ENST00000559401 PPP5D1E7EU14 171 aa6.27□□□□□ -1.41
SNX1-207ENST00000559401 BMPR1BO00238 502 aa6.27□□□□□ -1.41
SNX1-207ENST00000559401 CYB5BO43169 146 aa6.27□□□□□ -1.41
SNX1-207ENST00000559401 NDUFB8O95169 186 aa6.27□□□□□ -1.41
SNX1-207ENST00000559401 RAB3DO95716 219 aa6.27□□□□□ -1.41
SNX1-207ENST00000559401 SERPINE2P07093 398 aa6.27□□□□□ -1.41
SNX1-207ENST00000559401 TRAPPC2P0DI81 140 aa6.27□□□□□ -1.41
SNX1-207ENST00000559401 TRAPPC2BP0DI82 140 aa6.27□□□□□ -1.41
SNX1-207ENST00000559401 HIST1H1BP16401 226 aaKnown RBP6.27□□□□□ -1.41
SNX1-207ENST00000559401 CTRB1P17538 263 aa6.27□□□□□ -1.41
SNX1-207ENST00000559401 PI3P19957 117 aa6.27□□□□□ -1.41
SNX1-207ENST00000559401 TBPP20226 339 aa6.27□□□□□ -1.41
SNX1-207ENST00000559401 ARL3P36405 182 aa6.27□□□□□ -1.41
SNX1-207ENST00000559401 TAS2R19P59542 299 aa6.27□□□□□ -1.41
SNX1-207ENST00000559401 MRPS10P82664 201 aaKnown RBP6.27□□□□□ -1.41
SNX1-207ENST00000559401 KLF5Q13887 457 aaPredicted RBP6.27□□□□□ -1.41
SNX1-207ENST00000559401 FAM209BQ5JX69 171 aa6.27□□□□□ -1.41
SNX1-207ENST00000559401 CTRB2Q6GPI1 263 aa6.27□□□□□ -1.41
SNX1-207ENST00000559401 CLEC19AQ6UXS0 136 aa6.27□□□□□ -1.41
SNX1-207ENST00000559401 ARRDC1Q8N5I2 433 aa6.27□□□□□ -1.41
SNX1-207ENST00000559401 OR10W1Q8NGF6 305 aa6.27□□□□□ -1.41
SNX1-207ENST00000559401 OR1L8Q8NGR8 309 aa6.27□□□□□ -1.41
SNX1-207ENST00000559401 DYNC2LI1Q8TCX1 351 aa6.27□□□□□ -1.41
SNX1-207ENST00000559401 EEF1AKMT3Q96AZ1 226 aa6.27□□□□□ -1.41
SNX1-207ENST00000559401 TSC22D3Q99576 134 aa6.27□□□□□ -1.41
SNX1-207ENST00000559401 ASCL2Q99929 193 aa6.27□□□□□ -1.41
SNX1-207ENST00000559401 BCL7BQ9BQE9 202 aa6.27□□□□□ -1.41
SNX1-207ENST00000559401 MTFP1Q9UDX5 166 aa6.27□□□□□ -1.41
SNX1-207ENST00000559401 OR51B2Q9Y5P1 312 aa6.27□□□□□ -1.41
SNX1-207ENST00000559401 SMAD5-AS1Q9Y6J3 95 aa6.27□□□□□ -1.41
SNX1-207ENST00000559401 TEX50A0A1B0GTY4 177 aa6.26□□□□□ -1.41
SNX1-207ENST00000559401 IGLC7A0M8Q6 106 aa6.26□□□□□ -1.41
SNX1-207ENST00000559401 CGB1A6NKQ9 187 aa6.26□□□□□ -1.41
SNX1-207ENST00000559401 H3BMQ9 156 aa6.26□□□□□ -1.41
SNX1-207ENST00000559401 GABARAPH6UMI1 98 aa6.26□□□□□ -1.41
SNX1-207ENST00000559401 GGCTO75223 188 aaKnown RBP6.26□□□□□ -1.41
SNX1-207ENST00000559401 TPPPO94811 219 aa6.26□□□□□ -1.41
SNX1-207ENST00000559401 IGLV1-51P01701 117 aa6.26□□□□□ -1.41
SNX1-207ENST00000559401 HLA-AP01891 365 aaKnown RBP6.26□□□□□ -1.41
SNX1-207ENST00000559401 CRYGCP07315 174 aa6.26□□□□□ -1.41
SNX1-207ENST00000559401 OR13C7P0DN81 318 aa6.26□□□□□ -1.41
SNX1-207ENST00000559401 AKR1C2P52895 323 aa6.26□□□□□ -1.41
SNX1-207ENST00000559401 UCP3P55916 312 aa6.26□□□□□ -1.41
SNX1-207ENST00000559401 ZNF585BQ52M93 769 aa6.26□□□□□ -1.41
SNX1-207ENST00000559401 THOC7Q6I9Y2 204 aaKnown RBP6.26□□□□□ -1.41
SNX1-207ENST00000559401 SLC25A24Q6NUK1 477 aa6.26□□□□□ -1.41
SNX1-207ENST00000559401 FAAP20Q6NZ36 180 aa6.26□□□□□ -1.41
SNX1-207ENST00000559401 STEAP1BQ6NZ63 245 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms