RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 SRD5A3Q9H8P0 318 aa4.81□□□□□ -1.64
USP3-212ENST00000559276 ELL3Q9HB65 397 aaPredicted RBP4.81□□□□□ -1.64
USP3-212ENST00000559276 C1RLQ9NZP8 487 aa4.81□□□□□ -1.64
USP3-212ENST00000559276 CTSZQ9UBR2 303 aa4.81□□□□□ -1.64
USP3-212ENST00000559276 SLC7A11Q9UPY5 501 aa4.81□□□□□ -1.64
USP3-212ENST00000559276 PIGLQ9Y2B2 252 aa4.81□□□□□ -1.64
USP3-212ENST00000559276 UBE2J1Q9Y385 318 aaPredicted RBP4.81□□□□□ -1.64
USP3-212ENST00000559276 NOTCH1P46531 2555 aa4.8□□□□□ -1.64
USP3-212ENST00000559276 IGKV1D-8A0A087WSZ0 117 aa4.8□□□□□ -1.64
USP3-212ENST00000559276 TRBV6-6A0A0A6YYG2 114 aa4.8□□□□□ -1.64
USP3-212ENST00000559276 IGSF23A1L1A6 192 aa4.8□□□□□ -1.64
USP3-212ENST00000559276 FAM181BA6NEQ2 426 aa4.8□□□□□ -1.64
USP3-212ENST00000559276 SRRM5B3KS81 715 aa4.8□□□□□ -1.64
USP3-212ENST00000559276 TMEM250H0YL14 139 aa4.8□□□□□ -1.64
USP3-212ENST00000559276 J3QW42 95 aa4.8□□□□□ -1.64
USP3-212ENST00000559276 CYB5BO43169 146 aa4.8□□□□□ -1.64
USP3-212ENST00000559276 XRCC2O43543 280 aa4.8□□□□□ -1.64
USP3-212ENST00000559276 TUSC2O75896 110 aa4.8□□□□□ -1.64
USP3-212ENST00000559276 YIF1AO95070 293 aa4.8□□□□□ -1.64
USP3-212ENST00000559276 LY86O95711 162 aa4.8□□□□□ -1.64
USP3-212ENST00000559276 RAB4AP20338 218 aa4.8□□□□□ -1.64
USP3-212ENST00000559276 CD200P41217 278 aa4.8□□□□□ -1.64
USP3-212ENST00000559276 FHITP49789 147 aa4.8□□□□□ -1.64
USP3-212ENST00000559276 RBM11P57052 281 aaKnown RBP4.8□□□□□ -1.64
USP3-212ENST00000559276 FAM3BP58499 235 aaPredicted RBP4.8□□□□□ -1.64
USP3-212ENST00000559276 ERVFRD-1P60508 538 aa4.8□□□□□ -1.64
USP3-212ENST00000559276 FGF12P61328 243 aa4.8□□□□□ -1.64
USP3-212ENST00000559276 GNB2P62879 340 aa4.8□□□□□ -1.64
USP3-212ENST00000559276 HBG1P69891 147 aa4.8□□□□□ -1.64
USP3-212ENST00000559276 HBG2P69892 147 aa4.8□□□□□ -1.64
USP3-212ENST00000559276 NHLH2Q02577 135 aa4.8□□□□□ -1.64
USP3-212ENST00000559276 ACOT6Q3I5F7 207 aaPredicted RBP4.8□□□□□ -1.64
USP3-212ENST00000559276 PRAMEF6Q5VXH4 476 aa4.8□□□□□ -1.64
USP3-212ENST00000559276 WDR25Q64LD2 544 aaPredicted RBP4.8□□□□□ -1.64
USP3-212ENST00000559276 BRICD5Q6PL45 260 aa4.8□□□□□ -1.64
USP3-212ENST00000559276 CYP2G1PQ6ZSU1 146 aa4.8□□□□□ -1.64
USP3-212ENST00000559276 SLC25A26Q70HW3 274 aa4.8□□□□□ -1.64
USP3-212ENST00000559276 CENPVQ7Z7K6 275 aaPredicted RBP4.8□□□□□ -1.64
USP3-212ENST00000559276 RTN4RL2Q86UN3 420 aa4.8□□□□□ -1.64
USP3-212ENST00000559276 KIR3DL3Q8N743 410 aa4.8□□□□□ -1.64
USP3-212ENST00000559276 CYB561D1Q8N8Q1 229 aa4.8□□□□□ -1.64
USP3-212ENST00000559276 OR10A7Q8NGE5 316 aa4.8□□□□□ -1.64
USP3-212ENST00000559276 OR52M1Q8NGK5 317 aa4.8□□□□□ -1.64
USP3-212ENST00000559276 OR5D18Q8NGL1 313 aa4.8□□□□□ -1.64
USP3-212ENST00000559276 OR5L1Q8NGL2 311 aa4.8□□□□□ -1.64
USP3-212ENST00000559276 OR5C1Q8NGR4 320 aa4.8□□□□□ -1.64
USP3-212ENST00000559276 Q8TCH9 128 aa4.8□□□□□ -1.64
USP3-212ENST00000559276 LSM10Q969L4 123 aaKnown RBP4.8□□□□□ -1.64
USP3-212ENST00000559276 APOBEC3DQ96AK3 386 aaPredicted RBP4.8□□□□□ -1.64
USP3-212ENST00000559276 NEIL1Q96FI4 390 aaPredicted RBP4.8□□□□□ -1.64
USP3-212ENST00000559276 PACRGQ96M98 296 aaPredicted RBP4.8□□□□□ -1.64
USP3-212ENST00000559276 CLUHP3Q96NS8 147 aa4.8□□□□□ -1.64
USP3-212ENST00000559276 TBX15Q96SF7 602 aa4.8□□□□□ -1.64
USP3-212ENST00000559276 FAAP24Q9BTP7 215 aa4.8□□□□□ -1.64
USP3-212ENST00000559276 VAX2Q9UIW0 290 aa4.8□□□□□ -1.64
USP3-212ENST00000559276 TIMM9Q9Y5J7 89 aa4.8□□□□□ -1.64
USP3-212ENST00000559276 A0A087X0M5 115 aa4.79□□□□□ -1.64
USP3-212ENST00000559276 CENPVL3A0A0U1RRI6 287 aa4.79□□□□□ -1.64
USP3-212ENST00000559276 ZNF816-ZNF321PA0A0X1KG74 233 aa4.79□□□□□ -1.64
USP3-212ENST00000559276 A0A1B0GX30 115 aa4.79□□□□□ -1.64
USP3-212ENST00000559276 FAM90A26D6RGX4 464 aa4.79□□□□□ -1.64
USP3-212ENST00000559276 NPIPB11E5RHQ5 1161 aa4.79□□□□□ -1.64
USP3-212ENST00000559276 IFNL4K9M1U5 179 aa4.79□□□□□ -1.64
USP3-212ENST00000559276 PHOX2AO14813 284 aa4.79□□□□□ -1.64
USP3-212ENST00000559276 NDUFA7O95182 113 aa4.79□□□□□ -1.64
USP3-212ENST00000559276 NRASP01111 189 aa4.79□□□□□ -1.64
USP3-212ENST00000559276 MBP02144 154 aa4.79□□□□□ -1.64
USP3-212ENST00000559276 TYMSP04818 313 aa4.79□□□□□ -1.64
USP3-212ENST00000559276 CXCL1P09341 107 aa4.79□□□□□ -1.64
USP3-212ENST00000559276 AADACP22760 399 aa4.79□□□□□ -1.64
USP3-212ENST00000559276 CFHR2P36980 270 aa4.79□□□□□ -1.64
USP3-212ENST00000559276 SSX2Q16385 188 aa4.79□□□□□ -1.64
USP3-212ENST00000559276 SP6Q3SY56 376 aa4.79□□□□□ -1.64
USP3-212ENST00000559276 PHLDA2Q53GA4 152 aa4.79□□□□□ -1.64
USP3-212ENST00000559276 C9orf152Q5JTZ5 239 aa4.79□□□□□ -1.64
USP3-212ENST00000559276 FAM90A2PQ658T7 463 aa4.79□□□□□ -1.64
USP3-212ENST00000559276 FIP1L1Q6UN15 594 aaKnown RBP4.79□□□□□ -1.64
USP3-212ENST00000559276 BTNL3Q6UXE8 466 aa4.79□□□□□ -1.64
USP3-212ENST00000559276 MOB1BQ7L9L4 216 aa4.79□□□□□ -1.64
USP3-212ENST00000559276 RNF144BQ7Z419 303 aa4.79□□□□□ -1.64
USP3-212ENST00000559276 SELENOHQ8IZQ5 122 aaKnown RBP4.79□□□□□ -1.64
USP3-212ENST00000559276 FGFRL1Q8N441 504 aa4.79□□□□□ -1.64
USP3-212ENST00000559276 SCGB1C1Q8TD33 95 aa4.79□□□□□ -1.64
USP3-212ENST00000559276 SPSB4Q96A44 273 aa4.79□□□□□ -1.64
USP3-212ENST00000559276 BSCL2Q96G97 398 aaPredicted RBP4.79□□□□□ -1.64
USP3-212ENST00000559276 REEP6Q96HR9 211 aa4.79□□□□□ -1.64
USP3-212ENST00000559276 TP53RKQ96S44 253 aa4.79□□□□□ -1.64
USP3-212ENST00000559276 HIST1H2BLQ99880 126 aa4.79□□□□□ -1.64
USP3-212ENST00000559276 RARRES2Q99969 163 aa4.79□□□□□ -1.64
USP3-212ENST00000559276 CABLES2Q9BTV7 478 aa4.79□□□□□ -1.64
USP3-212ENST00000559276 NDUFAF3Q9BU61 184 aa4.79□□□□□ -1.64
USP3-212ENST00000559276 PARP12Q9H0J9 701 aaKnown RBP4.79□□□□□ -1.64
USP3-212ENST00000559276 SIRPDQ9H106 197 aa4.79□□□□□ -1.64
USP3-212ENST00000559276 SDF2L1Q9HCN8 221 aa4.79□□□□□ -1.64
USP3-212ENST00000559276 TNFRSF19Q9NS68 423 aa4.79□□□□□ -1.64
USP3-212ENST00000559276 NAT8Q9UHE5 227 aa4.79□□□□□ -1.64
USP3-212ENST00000559276 ST3GAL6Q9Y274 331 aa4.79□□□□□ -1.64
USP3-212ENST00000559276 hCG_38984A0A1B0GV85 526 aa4.78□□□□□ -1.64
USP3-212ENST00000559276 CLPSL1A2RUU4 121 aa4.78□□□□□ -1.64
USP3-212ENST00000559276 FAM24AA6NFZ4 105 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms