RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 CEACAM6P40199 344 aa12.52□□□□□ -0.41
CDC42BPB-203ENST00000558867 LGALSLQ3ZCW2 172 aaPredicted RBP12.52□□□□□ -0.41
CDC42BPB-203ENST00000558867 ZNF645Q8N7E2 425 aa12.52□□□□□ -0.41
CDC42BPB-203ENST00000558867 TCTEX1D1Q8N7M0 179 aa12.52□□□□□ -0.41
CDC42BPB-203ENST00000558867 RNF152Q8N8N0 203 aa12.52□□□□□ -0.41
CDC42BPB-203ENST00000558867 PPP1R1CQ8WVI7 109 aa12.52□□□□□ -0.41
CDC42BPB-203ENST00000558867 C4orf3Q8WVX3 66 aa12.52□□□□□ -0.41
CDC42BPB-203ENST00000558867 EDARADDQ8WWZ3 215 aa12.52□□□□□ -0.41
CDC42BPB-203ENST00000558867 ARL11Q969Q4 196 aa12.52□□□□□ -0.41
CDC42BPB-203ENST00000558867 WDR89Q96FK6 387 aaPredicted RBP12.52□□□□□ -0.41
CDC42BPB-203ENST00000558867 YPEL2Q96QA6 119 aa12.52□□□□□ -0.41
CDC42BPB-203ENST00000558867 RYR2Q92736 4967 aa12.51□□□□□ -0.41
CDC42BPB-203ENST00000558867 C5orf51A6NDU8 294 aa12.51□□□□□ -0.41
CDC42BPB-203ENST00000558867 PGLYRP1O75594 196 aaPredicted RBP12.51□□□□□ -0.41
CDC42BPB-203ENST00000558867 ADAP1O75689 374 aa12.51□□□□□ -0.41
CDC42BPB-203ENST00000558867 IGLV2-14P01704 120 aa12.51□□□□□ -0.41
CDC42BPB-203ENST00000558867 F2RP25116 425 aa12.51□□□□□ -0.41
CDC42BPB-203ENST00000558867 IL3RAP26951 378 aa12.51□□□□□ -0.41
CDC42BPB-203ENST00000558867 PSMB6P28072 239 aa12.51□□□□□ -0.41
CDC42BPB-203ENST00000558867 GNG10P50151 68 aa12.51□□□□□ -0.41
CDC42BPB-203ENST00000558867 EBI3Q14213 229 aa12.51□□□□□ -0.41
CDC42BPB-203ENST00000558867 ZNF345Q14585 488 aa12.51□□□□□ -0.41
CDC42BPB-203ENST00000558867 ZNF429Q86V71 674 aa12.51□□□□□ -0.41
CDC42BPB-203ENST00000558867 OR8H1Q8NGG4 311 aa12.51□□□□□ -0.41
CDC42BPB-203ENST00000558867 OR52M1Q8NGK5 317 aa12.51□□□□□ -0.41
CDC42BPB-203ENST00000558867 EAF1Q96JC9 268 aaPredicted RBP12.51□□□□□ -0.41
CDC42BPB-203ENST00000558867 TP53RKQ96S44 253 aa12.51□□□□□ -0.41
CDC42BPB-203ENST00000558867 PLSCR3Q9NRY6 295 aa12.51□□□□□ -0.41
CDC42BPB-203ENST00000558867 GAB2Q9UQC2 676 aa12.51□□□□□ -0.41
CDC42BPB-203ENST00000558867 HSD17B6O14756 317 aa12.5□□□□□ -0.41
CDC42BPB-203ENST00000558867 MPC2O95563 127 aa12.5□□□□□ -0.41
CDC42BPB-203ENST00000558867 IGHV3-7P01780 117 aa12.5□□□□□ -0.41
CDC42BPB-203ENST00000558867 PET100P0DJ07 73 aa12.5□□□□□ -0.41
CDC42BPB-203ENST00000558867 SSTR5P35346 364 aa12.5□□□□□ -0.41
CDC42BPB-203ENST00000558867 ZNF816Q0VGE8 651 aaPredicted RBP12.5□□□□□ -0.41
CDC42BPB-203ENST00000558867 EIF4EBP1Q13541 118 aaPredicted RBP12.5□□□□□ -0.41
CDC42BPB-203ENST00000558867 LTC4SQ16873 150 aa12.5□□□□□ -0.41
CDC42BPB-203ENST00000558867 GGNBP1Q5YKI7 109 aa12.5□□□□□ -0.41
CDC42BPB-203ENST00000558867 SBSPONQ8IVN8 264 aa12.5□□□□□ -0.41
CDC42BPB-203ENST00000558867 PRR18Q8N4B5 295 aa12.5□□□□□ -0.41
CDC42BPB-203ENST00000558867 OR11H1Q8NG94 326 aa12.5□□□□□ -0.41
CDC42BPB-203ENST00000558867 LEAP2Q969E1 77 aa12.5□□□□□ -0.41
CDC42BPB-203ENST00000558867 DNAH7Q8WXX0 4024 aa12.5□□□□□ -0.41
CDC42BPB-203ENST00000558867 IGHV1-3A0A0C4DH29 117 aa12.49□□□□□ -0.41
CDC42BPB-203ENST00000558867 FAM25EA8MYX2 175 aa12.49□□□□□ -0.41
CDC42BPB-203ENST00000558867 IGHG4P01861 327 aa12.49□□□□□ -0.41
CDC42BPB-203ENST00000558867 Q3ZCU0 254 aa12.49□□□□□ -0.41
CDC42BPB-203ENST00000558867 OR52L2PQ8NGH6 319 aa12.49□□□□□ -0.41
CDC42BPB-203ENST00000558867 GRPEL2Q8TAA5 225 aa12.49□□□□□ -0.41
CDC42BPB-203ENST00000558867 SEC22AQ96IW7 307 aa12.49□□□□□ -0.41
CDC42BPB-203ENST00000558867 OR10C1Q96KK4 312 aa12.49□□□□□ -0.41
CDC42BPB-203ENST00000558867 OR2S2Q9NQN1 319 aa12.49□□□□□ -0.41
CDC42BPB-203ENST00000558867 PAIP2BQ9ULR5 123 aaKnown RBP12.49□□□□□ -0.41
CDC42BPB-203ENST00000558867 TNFSF18Q9UNG2 199 aa12.49□□□□□ -0.41
CDC42BPB-203ENST00000558867 BOLA1Q9Y3E2 137 aa12.49□□□□□ -0.41
CDC42BPB-203ENST00000558867 SORL1Q92673 2214 aa12.49□□□□□ -0.41
CDC42BPB-203ENST00000558867 C13orf42A0A1B0GVH6 325 aa12.48□□□□□ -0.41
CDC42BPB-203ENST00000558867 LINC01548A6NM66 108 aa12.48□□□□□ -0.41
CDC42BPB-203ENST00000558867 L7N2F9 121 aa12.48□□□□□ -0.41
CDC42BPB-203ENST00000558867 MOSP00540 346 aa12.48□□□□□ -0.41
CDC42BPB-203ENST00000558867 HOXB5P09067 269 aa12.48□□□□□ -0.41
CDC42BPB-203ENST00000558867 OR8U9P0C7N5 309 aa12.48□□□□□ -0.41
CDC42BPB-203ENST00000558867 SLC25A6P12236 298 aa12.48□□□□□ -0.41
CDC42BPB-203ENST00000558867 CXCL2P19875 107 aa12.48□□□□□ -0.41
CDC42BPB-203ENST00000558867 OR2F1Q13607 317 aa12.48□□□□□ -0.41
CDC42BPB-203ENST00000558867 FHL3Q13643 280 aa12.48□□□□□ -0.41
CDC42BPB-203ENST00000558867 DIAPH2-AS1Q14236 149 aa12.48□□□□□ -0.41
CDC42BPB-203ENST00000558867 SP6Q3SY56 376 aa12.48□□□□□ -0.41
CDC42BPB-203ENST00000558867 MORN2Q502X0 79 aa12.48□□□□□ -0.41
CDC42BPB-203ENST00000558867 PRSS54Q6PEW0 395 aa12.48□□□□□ -0.41
CDC42BPB-203ENST00000558867 ZNF66Q6ZN08 573 aa12.48□□□□□ -0.41
CDC42BPB-203ENST00000558867 OR1N2Q8NGR9 330 aa12.48□□□□□ -0.41
CDC42BPB-203ENST00000558867 RFESDQ8TAC1 157 aa12.48□□□□□ -0.41
CDC42BPB-203ENST00000558867 LHFPL5Q8TAF8 219 aa12.48□□□□□ -0.41
CDC42BPB-203ENST00000558867 THAP6Q8TBB0 222 aa12.48□□□□□ -0.41
CDC42BPB-203ENST00000558867 RBPMSQ93062 196 aaKnown RBP12.48□□□□□ -0.41
CDC42BPB-203ENST00000558867 ABHD14BQ96IU4 210 aa12.48□□□□□ -0.41
CDC42BPB-203ENST00000558867 SPIN2AQ99865 258 aa12.48□□□□□ -0.41
CDC42BPB-203ENST00000558867 SPIN2BQ9BPZ2 258 aa12.48□□□□□ -0.41
CDC42BPB-203ENST00000558867 AGMATQ9BSE5 352 aa12.48□□□□□ -0.41
CDC42BPB-203ENST00000558867 PARP12Q9H0J9 701 aaKnown RBP12.48□□□□□ -0.41
CDC42BPB-203ENST00000558867 PRR13Q9NZ81 148 aa12.48□□□□□ -0.41
CDC42BPB-203ENST00000558867 FXYD6-FXYD2A0A087WZ82 144 aa12.47□□□□□ -0.41
CDC42BPB-203ENST00000558867 A0A0D9SG52 128 aa12.47□□□□□ -0.41
CDC42BPB-203ENST00000558867 CD1BP29016 333 aa12.47□□□□□ -0.41
CDC42BPB-203ENST00000558867 S100A11P31949 105 aa12.47□□□□□ -0.41
CDC42BPB-203ENST00000558867 ZNF616Q08AN1 781 aa12.47□□□□□ -0.41
CDC42BPB-203ENST00000558867 GNMTQ14749 295 aa12.47□□□□□ -0.41
CDC42BPB-203ENST00000558867 IAH1Q2TAA2 248 aaPredicted RBP12.47□□□□□ -0.41
CDC42BPB-203ENST00000558867 UTF1Q5T230 341 aa12.47□□□□□ -0.41
CDC42BPB-203ENST00000558867 ZNF767PQ75MW2 155 aa12.47□□□□□ -0.41
CDC42BPB-203ENST00000558867 ZNF546Q86UE3 836 aa12.47□□□□□ -0.41
CDC42BPB-203ENST00000558867 SELENOHQ8IZQ5 122 aaKnown RBP12.47□□□□□ -0.41
CDC42BPB-203ENST00000558867 Q8N9W7 124 aa12.47□□□□□ -0.41
CDC42BPB-203ENST00000558867 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.47□□□□□ -0.41
CDC42BPB-203ENST00000558867 UBE2E2Q96LR5 201 aa12.47□□□□□ -0.41
CDC42BPB-203ENST00000558867 CITED4Q96RK1 184 aa12.47□□□□□ -0.41
CDC42BPB-203ENST00000558867 S1PR3Q99500 378 aa12.47□□□□□ -0.41
CDC42BPB-203ENST00000558867 GFOD1Q9NXC2 390 aa12.47□□□□□ -0.41
CDC42BPB-203ENST00000558867 RBM7Q9Y580 266 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms