RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 ZNF645Q8N7E2 425 aa4.63□□□□□ -1.67
GABPB1-207ENST00000558335 TMEM178AQ8NBL3 297 aa4.63□□□□□ -1.67
GABPB1-207ENST00000558335 ZNF439Q8NDP4 499 aa4.63□□□□□ -1.67
GABPB1-207ENST00000558335 C1orf162Q8NEQ5 155 aaPredicted RBP4.63□□□□□ -1.67
GABPB1-207ENST00000558335 OR10P1Q8NGE3 313 aa4.63□□□□□ -1.67
GABPB1-207ENST00000558335 OR2T10Q8NGZ9 312 aa4.63□□□□□ -1.67
GABPB1-207ENST00000558335 PRR7Q8TB68 274 aa4.63□□□□□ -1.67
GABPB1-207ENST00000558335 MRPL30Q8TCC3 161 aaKnown RBP4.63□□□□□ -1.67
GABPB1-207ENST00000558335 TMEM190Q8WZ59 177 aa4.63□□□□□ -1.67
GABPB1-207ENST00000558335 NRGNQ92686 78 aa4.63□□□□□ -1.67
GABPB1-207ENST00000558335 LHX4Q969G2 390 aa4.63□□□□□ -1.67
GABPB1-207ENST00000558335 STARD4Q96DR4 205 aa4.63□□□□□ -1.67
GABPB1-207ENST00000558335 SDSLQ96GA7 329 aa4.63□□□□□ -1.67
GABPB1-207ENST00000558335 PIMREGQ9BSJ6 248 aa4.63□□□□□ -1.67
GABPB1-207ENST00000558335 OR51I2Q9H344 312 aa4.63□□□□□ -1.67
GABPB1-207ENST00000558335 LIME1Q9H400 295 aa4.63□□□□□ -1.67
GABPB1-207ENST00000558335 CCL28Q9NRJ3 127 aa4.63□□□□□ -1.67
GABPB1-207ENST00000558335 MBNL3Q9NUK0 354 aaKnown RBP4.63□□□□□ -1.67
GABPB1-207ENST00000558335 JKAMPQ9P055 326 aa4.63□□□□□ -1.67
GABPB1-207ENST00000558335 GNG13Q9P2W3 67 aa4.63□□□□□ -1.67
GABPB1-207ENST00000558335 ERRFI1Q9UJM3 462 aaPredicted RBP4.63□□□□□ -1.67
GABPB1-207ENST00000558335 RALYQ9UKM9 306 aaKnown RBP4.63□□□□□ -1.67
GABPB1-207ENST00000558335 PAM16Q9Y3D7 125 aa4.63□□□□□ -1.67
GABPB1-207ENST00000558335 LIPGQ9Y5X9 500 aa4.63□□□□□ -1.67
GABPB1-207ENST00000558335 DIRC3C9JPN6 131 aa4.62□□□□□ -1.67
GABPB1-207ENST00000558335 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.62□□□□□ -1.67
GABPB1-207ENST00000558335 TAX1BP3O14907 124 aa4.62□□□□□ -1.67
GABPB1-207ENST00000558335 SPINT2O43291 252 aa4.62□□□□□ -1.67
GABPB1-207ENST00000558335 ZNF737O75373 536 aa4.62□□□□□ -1.67
GABPB1-207ENST00000558335 KBTBD11O94819 623 aa4.62□□□□□ -1.67
GABPB1-207ENST00000558335 CNIH1O95406 144 aa4.62□□□□□ -1.67
GABPB1-207ENST00000558335 BRI3O95415 125 aa4.62□□□□□ -1.67
GABPB1-207ENST00000558335 CLDN14O95500 239 aa4.62□□□□□ -1.67
GABPB1-207ENST00000558335 HRASP01112 189 aa4.62□□□□□ -1.67
GABPB1-207ENST00000558335 SCTP09683 121 aa4.62□□□□□ -1.67
GABPB1-207ENST00000558335 LHX2P50458 406 aa4.62□□□□□ -1.67
GABPB1-207ENST00000558335 MFAP4P55083 255 aa4.62□□□□□ -1.67
GABPB1-207ENST00000558335 UCNP55089 124 aa4.62□□□□□ -1.67
GABPB1-207ENST00000558335 ERVK-16P61578 105 aa4.62□□□□□ -1.67
GABPB1-207ENST00000558335 GNB2P62879 340 aa4.62□□□□□ -1.67
GABPB1-207ENST00000558335 ARG2P78540 354 aa4.62□□□□□ -1.67
GABPB1-207ENST00000558335 Q0VG73 95 aa4.62□□□□□ -1.67
GABPB1-207ENST00000558335 LY6DQ14210 128 aa4.62□□□□□ -1.67
GABPB1-207ENST00000558335 RTL8BQ17RB0 113 aa4.62□□□□□ -1.67
GABPB1-207ENST00000558335 SP5Q6BEB4 398 aaPredicted RBP4.62□□□□□ -1.67
GABPB1-207ENST00000558335 PCSK4Q6UW60 755 aa4.62□□□□□ -1.67
GABPB1-207ENST00000558335 WFDC8Q8IUA0 241 aa4.62□□□□□ -1.67
GABPB1-207ENST00000558335 TTC9CQ8N5M4 171 aa4.62□□□□□ -1.67
GABPB1-207ENST00000558335 ZNF525Q8N782 197 aa4.62□□□□□ -1.67
GABPB1-207ENST00000558335 SIGLECL1Q8N7X8 197 aa4.62□□□□□ -1.67
GABPB1-207ENST00000558335 CYB561D1Q8N8Q1 229 aa4.62□□□□□ -1.67
GABPB1-207ENST00000558335 SUMF1Q8NBK3 374 aa4.62□□□□□ -1.67
GABPB1-207ENST00000558335 CT55Q8WUE5 264 aa4.62□□□□□ -1.67
GABPB1-207ENST00000558335 TAF15Q92804 592 aaKnown RBP eCLIP4.62□□□□□ -1.67
GABPB1-207ENST00000558335 SMIM7Q9BQ49 75 aa4.62□□□□□ -1.67
GABPB1-207ENST00000558335 ABHD14AQ9BUJ0 271 aa4.62□□□□□ -1.67
GABPB1-207ENST00000558335 WDR61Q9GZS3 305 aaKnown RBP4.62□□□□□ -1.67
GABPB1-207ENST00000558335 PARP12Q9H0J9 701 aaKnown RBP4.62□□□□□ -1.67
GABPB1-207ENST00000558335 ST20Q9HBF5 79 aa4.62□□□□□ -1.67
GABPB1-207ENST00000558335 SDF2L1Q9HCN8 221 aa4.62□□□□□ -1.67
GABPB1-207ENST00000558335 DLL3Q9NYJ7 618 aa4.62□□□□□ -1.67
GABPB1-207ENST00000558335 CACNG5Q9UF02 275 aa4.62□□□□□ -1.67
GABPB1-207ENST00000558335 PRSS50Q9UI38 385 aa4.62□□□□□ -1.67
GABPB1-207ENST00000558335 KCNS2Q9ULS6 477 aa4.62□□□□□ -1.67
GABPB1-207ENST00000558335 LOXL2Q9Y4K0 774 aa4.62□□□□□ -1.67
GABPB1-207ENST00000558335 ARL2-SNX15V9GYD0 113 aa4.62□□□□□ -1.67
GABPB1-207ENST00000558335 MYO9BQ13459 2157 aa4.62□□□□□ -1.67
GABPB1-207ENST00000558335 MYO7BQ6PIF6 2116 aa4.61□□□□□ -1.67
GABPB1-207ENST00000558335 ALPK2Q86TB3 2170 aa4.61□□□□□ -1.67
GABPB1-207ENST00000558335 CACNA1EQ15878 2313 aa4.61□□□□□ -1.67
GABPB1-207ENST00000558335 KMT2EQ8IZD2 1858 aa4.61□□□□□ -1.67
GABPB1-207ENST00000558335 TRAV9-2A0A087WT02 112 aa4.61□□□□□ -1.67
GABPB1-207ENST00000558335 SAA2-SAA4A0A096LPE2 208 aa4.61□□□□□ -1.67
GABPB1-207ENST00000558335 TRBV9A0A0B4J1U6 114 aa4.61□□□□□ -1.67
GABPB1-207ENST00000558335 GAGE12JA6NER3 117 aa4.61□□□□□ -1.67
GABPB1-207ENST00000558335 CEBPZOSA8MTT3 80 aa4.61□□□□□ -1.67
GABPB1-207ENST00000558335 IQCF6A8MYZ5 107 aa4.61□□□□□ -1.67
GABPB1-207ENST00000558335 FNDC10F2Z333 226 aa4.61□□□□□ -1.67
GABPB1-207ENST00000558335 H3BRM9 83 aa4.61□□□□□ -1.67
GABPB1-207ENST00000558335 SNAI2O43623 268 aa4.61□□□□□ -1.67
GABPB1-207ENST00000558335 ZNF253O75346 499 aa4.61□□□□□ -1.67
GABPB1-207ENST00000558335 GAGE7O76087 117 aa4.61□□□□□ -1.67
GABPB1-207ENST00000558335 CRYGBP07316 175 aa4.61□□□□□ -1.67
GABPB1-207ENST00000558335 GAGE12FP0CL80 117 aa4.61□□□□□ -1.67
GABPB1-207ENST00000558335 GAGE12GP0CL81 117 aa4.61□□□□□ -1.67
GABPB1-207ENST00000558335 GAGE12IP0CL82 117 aa4.61□□□□□ -1.67
GABPB1-207ENST00000558335 MYF5P13349 255 aa4.61□□□□□ -1.67
GABPB1-207ENST00000558335 AMTP48728 403 aa4.61□□□□□ -1.67
GABPB1-207ENST00000558335 HINT1P49773 126 aaPredicted RBP4.61□□□□□ -1.67
GABPB1-207ENST00000558335 ASCL1P50553 236 aa4.61□□□□□ -1.67
GABPB1-207ENST00000558335 PAX9P55771 341 aa4.61□□□□□ -1.67
GABPB1-207ENST00000558335 GAGE4Q13068 117 aa4.61□□□□□ -1.67
GABPB1-207ENST00000558335 PSG5Q15238 335 aa4.61□□□□□ -1.67
GABPB1-207ENST00000558335 OR1C1Q15619 314 aa4.61□□□□□ -1.67
GABPB1-207ENST00000558335 TDRG1Q3Y452 100 aa4.61□□□□□ -1.67
GABPB1-207ENST00000558335 TMEM97Q5BJF2 176 aa4.61□□□□□ -1.67
GABPB1-207ENST00000558335 FFAR4Q5NUL3 377 aa4.61□□□□□ -1.67
GABPB1-207ENST00000558335 FAM162BQ5T6X4 162 aa4.61□□□□□ -1.67
GABPB1-207ENST00000558335 ZNF343Q6P1L6 599 aa4.61□□□□□ -1.67
GABPB1-207ENST00000558335 TMEM14EPQ6UXP3 125 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms