RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 KIR2DS1A0A191URI9 304 aa6.7□□□□□ -1.34
RTF1-205ENST00000558298 IGSF23A1L1A6 192 aa6.7□□□□□ -1.34
RTF1-205ENST00000558298 ZFP92A6NM28 416 aa6.7□□□□□ -1.34
RTF1-205ENST00000558298 H0Y980 276 aa6.7□□□□□ -1.34
RTF1-205ENST00000558298 XRCC2O43543 280 aa6.7□□□□□ -1.34
RTF1-205ENST00000558298 SSSCA1O60232 199 aa6.7□□□□□ -1.34
RTF1-205ENST00000558298 YPEL1O60688 119 aa6.7□□□□□ -1.34
RTF1-205ENST00000558298 SMPD2O60906 423 aa6.7□□□□□ -1.34
RTF1-205ENST00000558298 DHRS3O75911 302 aa6.7□□□□□ -1.34
RTF1-205ENST00000558298 ADH4P08319 380 aa6.7□□□□□ -1.34
RTF1-205ENST00000558298 OR5G3P0C626 314 aa6.7□□□□□ -1.34
RTF1-205ENST00000558298 KIR2DS4P43632 304 aa6.7□□□□□ -1.34
RTF1-205ENST00000558298 ELLP55199 621 aaPredicted RBP6.7□□□□□ -1.34
RTF1-205ENST00000558298 RPL23P62829 140 aaKnown RBP6.7□□□□□ -1.34
RTF1-205ENST00000558298 KIR2DS1Q14954 304 aa6.7□□□□□ -1.34
RTF1-205ENST00000558298 PRSS8Q16651 343 aa6.7□□□□□ -1.34
RTF1-205ENST00000558298 OR10J3Q5JRS4 329 aa6.7□□□□□ -1.34
RTF1-205ENST00000558298 TPTE2P1Q5T6R2 138 aa6.7□□□□□ -1.34
RTF1-205ENST00000558298 MBNL2Q5VZF2 373 aaKnown RBP6.7□□□□□ -1.34
RTF1-205ENST00000558298 ZNF880Q6PDB4 577 aa6.7□□□□□ -1.34
RTF1-205ENST00000558298 TMEM37Q8WXS4 190 aa6.7□□□□□ -1.34
RTF1-205ENST00000558298 OR5P3Q8WZ94 311 aa6.7□□□□□ -1.34
RTF1-205ENST00000558298 NEUROG1Q92886 237 aa6.7□□□□□ -1.34
RTF1-205ENST00000558298 LHX4Q969G2 390 aa6.7□□□□□ -1.34
RTF1-205ENST00000558298 LSM10Q969L4 123 aaKnown RBP6.7□□□□□ -1.34
RTF1-205ENST00000558298 YPEL2Q96QA6 119 aa6.7□□□□□ -1.34
RTF1-205ENST00000558298 DIRC2Q96SL1 478 aa6.7□□□□□ -1.34
RTF1-205ENST00000558298 TXN2Q99757 166 aa6.7□□□□□ -1.34
RTF1-205ENST00000558298 REPIN1Q9BWE0 567 aaKnown RBP6.7□□□□□ -1.34
RTF1-205ENST00000558298 SAMD10Q9BYL1 202 aa6.7□□□□□ -1.34
RTF1-205ENST00000558298 KCNIP2Q9NS61 270 aa6.7□□□□□ -1.34
RTF1-205ENST00000558298 MRPL27Q9P0M9 148 aaKnown RBP6.7□□□□□ -1.34
RTF1-205ENST00000558298 POLR1DQ9Y2S0 133 aa6.7□□□□□ -1.34
RTF1-205ENST00000558298 SETD2Q9BYW2 2564 aaPredicted RBP6.69□□□□□ -1.34
RTF1-205ENST00000558298 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.69□□□□□ -1.344e-6■■□□□ 13.3
RTF1-205ENST00000558298 NXPH2O95156 264 aa6.69□□□□□ -1.34
RTF1-205ENST00000558298 IGHV3-13P01766 116 aa6.69□□□□□ -1.34
RTF1-205ENST00000558298 PATE4P0C8F1 98 aa6.69□□□□□ -1.34
RTF1-205ENST00000558298 SCGB1A1P11684 91 aa6.69□□□□□ -1.34
RTF1-205ENST00000558298 CRISP2P16562 243 aa6.69□□□□□ -1.34
RTF1-205ENST00000558298 BMI1P35226 326 aa6.69□□□□□ -1.34
RTF1-205ENST00000558298 WNT5AP41221 380 aa6.69□□□□□ -1.34
RTF1-205ENST00000558298 OR3A4PP47883 348 aa6.69□□□□□ -1.34
RTF1-205ENST00000558298 FABP6P51161 128 aa6.69□□□□□ -1.34
RTF1-205ENST00000558298 DSCR9P59020 149 aa6.69□□□□□ -1.34
RTF1-205ENST00000558298 LRRC75BQ2VPJ9 315 aa6.69□□□□□ -1.34
RTF1-205ENST00000558298 LHFPL2Q6ZUX7 228 aa6.69□□□□□ -1.34
RTF1-205ENST00000558298 TMEM144Q7Z5S9 345 aa6.69□□□□□ -1.34
RTF1-205ENST00000558298 OR10S1Q8NGN2 331 aa6.69□□□□□ -1.34
RTF1-205ENST00000558298 OR1F12Q8NHA8 337 aa6.69□□□□□ -1.34
RTF1-205ENST00000558298 OR51E1Q8TCB6 317 aa6.69□□□□□ -1.34
RTF1-205ENST00000558298 MRPL30Q8TCC3 161 aaKnown RBP6.69□□□□□ -1.34
RTF1-205ENST00000558298 FAM71F1Q96KD3 344 aaPredicted RBP6.69□□□□□ -1.34
RTF1-205ENST00000558298 VPS25Q9BRG1 176 aa6.69□□□□□ -1.34
RTF1-205ENST00000558298 C1QTNF5Q9BXJ0 243 aa6.69□□□□□ -1.34
RTF1-205ENST00000558298 BANF2Q9H503 90 aa6.69□□□□□ -1.34
RTF1-205ENST00000558298 PLEK2Q9NYT0 353 aa6.69□□□□□ -1.34
RTF1-205ENST00000558298 TBL2Q9Y4P3 447 aaKnown RBP6.69□□□□□ -1.34
RTF1-205ENST00000558298 ATP23Q9Y6H3 246 aa6.69□□□□□ -1.34
RTF1-205ENST00000558298 C2CD3Q4AC94 2353 aa6.68□□□□□ -1.34
RTF1-205ENST00000558298 MDFIC2A0A1B0GVS7 189 aa6.68□□□□□ -1.34
RTF1-205ENST00000558298 FAM24AA6NFZ4 105 aa6.68□□□□□ -1.34
RTF1-205ENST00000558298 CBY3A6NI87 242 aa6.68□□□□□ -1.34
RTF1-205ENST00000558298 RER1O15258 196 aa6.68□□□□□ -1.34
RTF1-205ENST00000558298 ZNF253O75346 499 aa6.68□□□□□ -1.34
RTF1-205ENST00000558298 MPZL1O95297 269 aa6.68□□□□□ -1.34
RTF1-205ENST00000558298 IGLV3-1P01715 115 aa6.68□□□□□ -1.34
RTF1-205ENST00000558298 KITLGP21583 273 aa6.68□□□□□ -1.34
RTF1-205ENST00000558298 RPL15P61313 204 aaKnown RBP6.68□□□□□ -1.34
RTF1-205ENST00000558298 RHOGP84095 191 aa6.68□□□□□ -1.34
RTF1-205ENST00000558298 MALLQ13021 153 aa6.68□□□□□ -1.34
RTF1-205ENST00000558298 MSMPQ1L6U9 139 aa6.68□□□□□ -1.34
RTF1-205ENST00000558298 NMSQ5H8A3 153 aa6.68□□□□□ -1.34
RTF1-205ENST00000558298 Q5PR19 223 aa6.68□□□□□ -1.34
RTF1-205ENST00000558298 ASCL4Q6XD76 172 aa6.68□□□□□ -1.34
RTF1-205ENST00000558298 OR52M1Q8NGK5 317 aa6.68□□□□□ -1.34
RTF1-205ENST00000558298 NEU4Q8WWR8 484 aaPredicted RBP6.68□□□□□ -1.34
RTF1-205ENST00000558298 RAB1CQ92928 201 aa6.68□□□□□ -1.34
RTF1-205ENST00000558298 TNFRSF14Q92956 283 aa6.68□□□□□ -1.34
RTF1-205ENST00000558298 TOMM40LQ969M1 308 aa6.68□□□□□ -1.34
RTF1-205ENST00000558298 APOBEC3DQ96AK3 386 aaPredicted RBP6.68□□□□□ -1.34
RTF1-205ENST00000558298 RPUSD4Q96CM3 377 aaKnown RBP6.68□□□□□ -1.34
RTF1-205ENST00000558298 MS4A5Q9H3V2 200 aa6.68□□□□□ -1.34
RTF1-205ENST00000558298 RPRMQ9NS64 109 aa6.68□□□□□ -1.34
RTF1-205ENST00000558298 ST3GAL6Q9Y274 331 aa6.68□□□□□ -1.34
RTF1-205ENST00000558298 ARL2-SNX15V9GYD0 113 aa6.68□□□□□ -1.34
RTF1-205ENST00000558298 TLN2Q9Y4G6 2542 aa6.68□□□□□ -1.34
RTF1-205ENST00000558298 A0A0U1RQK1 487 aa6.67□□□□□ -1.34
RTF1-205ENST00000558298 A0A1B0GV50 99 aa6.67□□□□□ -1.34
RTF1-205ENST00000558298 ZNF320A2RRD8 509 aa6.67□□□□□ -1.34
RTF1-205ENST00000558298 C5orf49A4QMS7 147 aa6.67□□□□□ -1.34
RTF1-205ENST00000558298 H3BSH0 61 aa6.67□□□□□ -1.34
RTF1-205ENST00000558298 MLNRO43193 412 aa6.67□□□□□ -1.34
RTF1-205ENST00000558298 MT-CO2P00403 227 aa6.67□□□□□ -1.34
RTF1-205ENST00000558298 PPYP01298 95 aa6.67□□□□□ -1.34
RTF1-205ENST00000558298 IGHV4-39P01824 125 aa6.67□□□□□ -1.34
RTF1-205ENST00000558298 GYPAP02724 150 aa6.67□□□□□ -1.34
RTF1-205ENST00000558298 CD55P08174 381 aa6.67□□□□□ -1.34
RTF1-205ENST00000558298 IL3RAP26951 378 aa6.67□□□□□ -1.34
RTF1-205ENST00000558298 RPS27P42677 84 aaKnown RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms