RNA–Protein interactions for RNA: ENST00000557490.5

TUBB3-214, Transcript of tubulin beta 3 class III, humanhuman

TSL 5

Gene TUBB3, Length 806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-214ENST00000557490 HMX3A6NHT5 357 aa12.27□□□□□ -0.45
TUBB3-214ENST00000557490 MARCH11A6NNE9 402 aa12.27□□□□□ -0.45
TUBB3-214ENST00000557490 DISC1C4P0D8 188 aa12.27□□□□□ -0.45
TUBB3-214ENST00000557490 GSTZ1O43708 216 aaPredicted RBP12.27□□□□□ -0.45
TUBB3-214ENST00000557490 HSPB1P04792 205 aaKnown RBP12.27□□□□□ -0.45
TUBB3-214ENST00000557490 IL6RP08887 468 aaPredicted RBP12.27□□□□□ -0.45
TUBB3-214ENST00000557490 ZNF735P0CB33 412 aa12.27□□□□□ -0.45
TUBB3-214ENST00000557490 AKAIN1P0CW23 69 aa12.27□□□□□ -0.45
TUBB3-214ENST00000557490 RPA2P15927 270 aa12.27□□□□□ -0.45
TUBB3-214ENST00000557490 PPP5CP53041 499 aa12.27□□□□□ -0.45
TUBB3-214ENST00000557490 TTC9CQ8N5M4 171 aa12.27□□□□□ -0.45
TUBB3-214ENST00000557490 ZFAND1Q8TCF1 268 aa12.27□□□□□ -0.45
TUBB3-214ENST00000557490 USMG5Q96IX5 58 aa12.27□□□□□ -0.45
TUBB3-214ENST00000557490 SOSTQ9BQB4 213 aa12.27□□□□□ -0.45
TUBB3-214ENST00000557490 COMMD5Q9GZQ3 224 aa12.27□□□□□ -0.45
TUBB3-214ENST00000557490 SLC2A9Q9NRM0 540 aa12.27□□□□□ -0.45
TUBB3-214ENST00000557490 FAM212BQ9NTI7 297 aaPredicted RBP12.27□□□□□ -0.45
TUBB3-214ENST00000557490 IGHV4OR15-8A0A075B7B6 117 aa12.26□□□□□ -0.45
TUBB3-214ENST00000557490 A0A087WW49 117 aa12.26□□□□□ -0.45
TUBB3-214ENST00000557490 TRAV3A0A0B4J244 114 aa12.26□□□□□ -0.45
TUBB3-214ENST00000557490 TEX22C9J3V5 150 aa12.26□□□□□ -0.45
TUBB3-214ENST00000557490 KRASP01116 189 aa12.26□□□□□ -0.45
TUBB3-214ENST00000557490 RND3P61587 244 aa12.26□□□□□ -0.45
TUBB3-214ENST00000557490 ZNF585BQ52M93 769 aa12.26□□□□□ -0.45
TUBB3-214ENST00000557490 ZNF257Q9Y2Q1 563 aa12.26□□□□□ -0.45
TUBB3-214ENST00000557490 FAM223BA6NKX1 122 aa12.25□□□□□ -0.45
TUBB3-214ENST00000557490 NPIPB5A8MRT5 1133 aa12.25□□□□□ -0.45
TUBB3-214ENST00000557490 SEC14L6B5MCN3 397 aa12.25□□□□□ -0.45
TUBB3-214ENST00000557490 SNAPC5O75971 98 aa12.25□□□□□ -0.45
TUBB3-214ENST00000557490 PRH1P02810 166 aa12.25□□□□□ -0.45
TUBB3-214ENST00000557490 SERPINE2P07093 398 aa12.25□□□□□ -0.45
TUBB3-214ENST00000557490 FGF2P09038 288 aa12.25□□□□□ -0.45
TUBB3-214ENST00000557490 MYOD1P15172 320 aa12.25□□□□□ -0.45
TUBB3-214ENST00000557490 PI3P19957 117 aa12.25□□□□□ -0.45
TUBB3-214ENST00000557490 HOXD3P31249 432 aaPredicted RBP12.25□□□□□ -0.45
TUBB3-214ENST00000557490 G6PCP35575 357 aa12.25□□□□□ -0.45
TUBB3-214ENST00000557490 ECI1P42126 302 aa12.25□□□□□ -0.45
TUBB3-214ENST00000557490 PIGPP57054 158 aa12.25□□□□□ -0.45
TUBB3-214ENST00000557490 RHOGP84095 191 aa12.25□□□□□ -0.45
TUBB3-214ENST00000557490 C9orf66Q5T8R8 295 aa12.25□□□□□ -0.45
TUBB3-214ENST00000557490 FAAP20Q6NZ36 180 aa12.25□□□□□ -0.45
TUBB3-214ENST00000557490 FAM223AQ8IWN6 122 aa12.25□□□□□ -0.45
TUBB3-214ENST00000557490 CADM3Q8N126 398 aa12.25□□□□□ -0.45
TUBB3-214ENST00000557490 CCDC71LQ8N9Z2 235 aa12.25□□□□□ -0.45
TUBB3-214ENST00000557490 DCUN1D4Q92564 292 aa12.25□□□□□ -0.45
TUBB3-214ENST00000557490 RANGRFQ9HD47 186 aaPredicted RBP12.25□□□□□ -0.45
TUBB3-214ENST00000557490 COPZ2Q9P299 210 aa12.25□□□□□ -0.45
TUBB3-214ENST00000557490 ZMAT5Q9UDW3 170 aaKnown RBP12.25□□□□□ -0.45
TUBB3-214ENST00000557490 ANKRD20A5PA0PJZ0 165 aa12.24□□□□□ -0.45
TUBB3-214ENST00000557490 ANKRD34BA5PLL1 514 aa12.24□□□□□ -0.45
TUBB3-214ENST00000557490 E7EUB6 86 aa12.24□□□□□ -0.45
TUBB3-214ENST00000557490 OVOL1O14753 267 aa12.24□□□□□ -0.45
TUBB3-214ENST00000557490 DHFRP00374 187 aa12.24□□□□□ -0.45
TUBB3-214ENST00000557490 TNCP24821 2201 aa12.24□□□□□ -0.45
TUBB3-214ENST00000557490 SLURP1P55000 103 aa12.24□□□□□ -0.45
TUBB3-214ENST00000557490 OR2B8PP59922 312 aa12.24□□□□□ -0.45
TUBB3-214ENST00000557490 DEFA5Q01523 94 aa12.24□□□□□ -0.45
TUBB3-214ENST00000557490 ATP5G2Q06055 141 aa12.24□□□□□ -0.45
TUBB3-214ENST00000557490 PYDC2Q56P42 97 aa12.24□□□□□ -0.45
TUBB3-214ENST00000557490 OR4C16Q8NGL9 310 aa12.24□□□□□ -0.45
TUBB3-214ENST00000557490 OR13C8Q8NGS7 320 aa12.24□□□□□ -0.45
TUBB3-214ENST00000557490 PRRT1Q99946 306 aa12.24□□□□□ -0.45
TUBB3-214ENST00000557490 THAP7Q9BT49 309 aaPredicted RBP12.24□□□□□ -0.45
TUBB3-214ENST00000557490 AKIP1Q9NQ31 210 aa12.24□□□□□ -0.45
TUBB3-214ENST00000557490 NDUFA13Q9P0J0 144 aa12.24□□□□□ -0.45
TUBB3-214ENST00000557490 A0A1B0GW64 132 aa12.23□□□□□ -0.45
TUBB3-214ENST00000557490 H0Y980 276 aa12.23□□□□□ -0.45
TUBB3-214ENST00000557490 CTSDP07339 412 aaPredicted RBP12.23□□□□□ -0.45
TUBB3-214ENST00000557490 AREGP15514 252 aa12.23□□□□□ -0.45
TUBB3-214ENST00000557490 ZP3P21754 424 aa12.23□□□□□ -0.45
TUBB3-214ENST00000557490 PTBP1P26599 531 aaKnown RBP eCLIP12.23□□□□□ -0.452e-42■■■■■ 46.6
TUBB3-214ENST00000557490 PSMB6P28072 239 aa12.23□□□□□ -0.45
TUBB3-214ENST00000557490 ZNF45Q02386 682 aa12.23□□□□□ -0.45
TUBB3-214ENST00000557490 EGFEM1PQ0D2K5 195 aa12.23□□□□□ -0.45
TUBB3-214ENST00000557490 THOC7Q6I9Y2 204 aaKnown RBP12.23□□□□□ -0.45
TUBB3-214ENST00000557490 ZNF343Q6P1L6 599 aa12.23□□□□□ -0.45
TUBB3-214ENST00000557490 NECAP1Q8NC96 275 aa12.23□□□□□ -0.45
TUBB3-214ENST00000557490 OR1L8Q8NGR8 309 aa12.23□□□□□ -0.45
TUBB3-214ENST00000557490 MARCH1Q8TCQ1 289 aa12.23□□□□□ -0.45
TUBB3-214ENST00000557490 MRAPQ8TCY5 172 aa12.23□□□□□ -0.45
TUBB3-214ENST00000557490 DLX4Q92988 240 aaPredicted RBP12.23□□□□□ -0.45
TUBB3-214ENST00000557490 TSC22D3Q99576 134 aa12.23□□□□□ -0.45
TUBB3-214ENST00000557490 SRSF8Q9BRL6 282 aaKnown RBP12.23□□□□□ -0.45
TUBB3-214ENST00000557490 QTRT1Q9BXR0 403 aaKnown RBP12.23□□□□□ -0.45
TUBB3-214ENST00000557490 AURKAIP1Q9NWT8 199 aaPredicted RBP12.23□□□□□ -0.45
TUBB3-214ENST00000557490 PRNDQ9UKY0 176 aa12.23□□□□□ -0.45
TUBB3-214ENST00000557490 C14orf166Q9Y224 244 aaKnown RBP12.23□□□□□ -0.45
TUBB3-214ENST00000557490 TRBV9A0A0B4J1U6 114 aa12.22□□□□□ -0.45
TUBB3-214ENST00000557490 C3orf85A0A1B0GTC6 90 aa12.22□□□□□ -0.45
TUBB3-214ENST00000557490 OR2J3O76001 311 aa12.22□□□□□ -0.45
TUBB3-214ENST00000557490 CRYGCP07315 174 aa12.22□□□□□ -0.45
TUBB3-214ENST00000557490 TRAPPC2P0DI81 140 aa12.22□□□□□ -0.45
TUBB3-214ENST00000557490 TRAPPC2BP0DI82 140 aa12.22□□□□□ -0.45
TUBB3-214ENST00000557490 DEFA4P12838 97 aa12.22□□□□□ -0.45
TUBB3-214ENST00000557490 KRTAP10-11P60412 298 aa12.22□□□□□ -0.45
TUBB3-214ENST00000557490 SURF2Q15527 256 aaPredicted RBP12.22□□□□□ -0.45
TUBB3-214ENST00000557490 H2BFWTQ7Z2G1 175 aa12.22□□□□□ -0.45
TUBB3-214ENST00000557490 FKBP11Q9NYL4 201 aa12.22□□□□□ -0.45
TUBB3-214ENST00000557490 PEF1Q9UBV8 284 aaKnown RBP12.22□□□□□ -0.45
TUBB3-214ENST00000557490 SCP2D1Q9UJQ7 156 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms