RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 IGHV1-18A0A0C4DH31 117 aa4.12□□□□□ -1.75
SRP54-211ENST00000556445 DUXBA0A1W2PPF3 345 aa4.12□□□□□ -1.75
SRP54-211ENST00000556445 A0A1W2PR80 420 aa4.12□□□□□ -1.75
SRP54-211ENST00000556445 OR5H14A6NHG9 310 aa4.12□□□□□ -1.75
SRP54-211ENST00000556445 CRYM-AS1A6NIL9 109 aa4.12□□□□□ -1.75
SRP54-211ENST00000556445 TRDCB7Z8K6 153 aa4.12□□□□□ -1.75
SRP54-211ENST00000556445 K7EN84 100 aa4.12□□□□□ -1.75
SRP54-211ENST00000556445 SDCBPO00560 298 aaPredicted RBP4.12□□□□□ -1.75
SRP54-211ENST00000556445 SIGLEC5O15389 551 aa4.12□□□□□ -1.75
SRP54-211ENST00000556445 SYNGR1O43759 233 aa4.12□□□□□ -1.75
SRP54-211ENST00000556445 RP2O75695 350 aa4.12□□□□□ -1.75
SRP54-211ENST00000556445 RLN2P04090 185 aa4.12□□□□□ -1.75
SRP54-211ENST00000556445 FABP1P07148 127 aa4.12□□□□□ -1.75
SRP54-211ENST00000556445 IGHV4-30-4P0DP06 118 aa4.12□□□□□ -1.75
SRP54-211ENST00000556445 FCGR2CP31995 323 aa4.12□□□□□ -1.75
SRP54-211ENST00000556445 SAA4P35542 130 aa4.12□□□□□ -1.75
SRP54-211ENST00000556445 GLRXP35754 106 aa4.12□□□□□ -1.75
SRP54-211ENST00000556445 TDGF1P3P51864 188 aa4.12□□□□□ -1.75
SRP54-211ENST00000556445 AP2S1P53680 142 aaPredicted RBP4.12□□□□□ -1.75
SRP54-211ENST00000556445 KLF3P57682 345 aaPredicted RBP4.12□□□□□ -1.75
SRP54-211ENST00000556445 RND3P61587 244 aa4.12□□□□□ -1.75
SRP54-211ENST00000556445 ARF6P62330 175 aa4.12□□□□□ -1.75
SRP54-211ENST00000556445 EIF5AP63241 154 aaKnown RBP4.12□□□□□ -1.75
SRP54-211ENST00000556445 RPL36AP83881 106 aaKnown RBP4.12□□□□□ -1.75
SRP54-211ENST00000556445 PSG7Q13046 419 aa4.12□□□□□ -1.75
SRP54-211ENST00000556445 ZNF345Q14585 488 aa4.12□□□□□ -1.75
SRP54-211ENST00000556445 SMCO1Q147U7 214 aa4.12□□□□□ -1.75
SRP54-211ENST00000556445 ATP6V1FQ16864 119 aa4.12□□□□□ -1.75
SRP54-211ENST00000556445 TMEM249Q2WGJ8 235 aa4.12□□□□□ -1.75
SRP54-211ENST00000556445 SMIM21Q3B7S5 101 aa4.12□□□□□ -1.75
SRP54-211ENST00000556445 LGALSLQ3ZCW2 172 aaPredicted RBP4.12□□□□□ -1.75
SRP54-211ENST00000556445 FAM106AQ4KMX7 169 aa4.12□□□□□ -1.75
SRP54-211ENST00000556445 AADACL3Q5VUY0 350 aa4.12□□□□□ -1.75
SRP54-211ENST00000556445 ZNF660Q6AZW8 331 aaPredicted RBP4.12□□□□□ -1.75
SRP54-211ENST00000556445 THOC7Q6I9Y2 204 aaKnown RBP4.12□□□□□ -1.75
SRP54-211ENST00000556445 LAMTOR1Q6IAA8 161 aa4.12□□□□□ -1.75
SRP54-211ENST00000556445 C9orf139Q6ZV77 190 aa4.12□□□□□ -1.75
SRP54-211ENST00000556445 TMEM219Q86XT9 240 aa4.12□□□□□ -1.75
SRP54-211ENST00000556445 ODF3L1Q8IXM7 274 aa4.12□□□□□ -1.75
SRP54-211ENST00000556445 LGI3Q8N145 548 aa4.12□□□□□ -1.75
SRP54-211ENST00000556445 SUMF2Q8NBJ7 301 aa4.12□□□□□ -1.75
SRP54-211ENST00000556445 C2orf50Q96LR7 162 aa4.12□□□□□ -1.75
SRP54-211ENST00000556445 PACRGQ96M98 296 aaPredicted RBP4.12□□□□□ -1.75
SRP54-211ENST00000556445 C17orf77Q96MU5 243 aa4.12□□□□□ -1.75
SRP54-211ENST00000556445 NRIP2Q9BQI9 281 aa4.12□□□□□ -1.75
SRP54-211ENST00000556445 RTBDNQ9BSG5 229 aaPredicted RBP4.12□□□□□ -1.75
SRP54-211ENST00000556445 FXYD6Q9H0Q3 95 aa4.12□□□□□ -1.75
SRP54-211ENST00000556445 TLNRD1Q9H1K6 362 aa4.12□□□□□ -1.75
SRP54-211ENST00000556445 Q9HAA7 133 aa4.12□□□□□ -1.75
SRP54-211ENST00000556445 CA10Q9NS85 328 aa4.12□□□□□ -1.75
SRP54-211ENST00000556445 KCNIP1Q9NZI2 227 aa4.12□□□□□ -1.75
SRP54-211ENST00000556445 ZNF230Q9UIE0 474 aaPredicted RBP4.12□□□□□ -1.75
SRP54-211ENST00000556445 TCF19Q9Y242 345 aa4.12□□□□□ -1.75
SRP54-211ENST00000556445 GVINP1Q7Z2Y8 2422 aa4.11□□□□□ -1.75
SRP54-211ENST00000556445 KANTRA0A1W2PQU2 76 aa4.11□□□□□ -1.75
SRP54-211ENST00000556445 FAM231BA6NCW3 169 aa4.11□□□□□ -1.75
SRP54-211ENST00000556445 EEF1E1-BLOC1S5C9J1V9 151 aa4.11□□□□□ -1.75
SRP54-211ENST00000556445 C16orf97H3BN30 126 aa4.11□□□□□ -1.75
SRP54-211ENST00000556445 M0R1B8 84 aa4.11□□□□□ -1.75
SRP54-211ENST00000556445 GPR31O00270 319 aa4.11□□□□□ -1.75
SRP54-211ENST00000556445 PPP1R2P9O14990 202 aa4.11□□□□□ -1.75
SRP54-211ENST00000556445 CDK2AP2O75956 126 aa4.11□□□□□ -1.75
SRP54-211ENST00000556445 SIX6O95475 246 aa4.11□□□□□ -1.75
SRP54-211ENST00000556445 CLDN14O95500 239 aa4.11□□□□□ -1.75
SRP54-211ENST00000556445 PPYP01298 95 aa4.11□□□□□ -1.75
SRP54-211ENST00000556445 IFNA5P01569 189 aa4.11□□□□□ -1.75
SRP54-211ENST00000556445 IGHV3-13P01766 116 aa4.11□□□□□ -1.75
SRP54-211ENST00000556445 ZNF250P15622 560 aa4.11□□□□□ -1.75
SRP54-211ENST00000556445 G0S2P27469 103 aa4.11□□□□□ -1.75
SRP54-211ENST00000556445 MPV17P39210 176 aa4.11□□□□□ -1.75
SRP54-211ENST00000556445 LEPP41159 167 aa4.11□□□□□ -1.75
SRP54-211ENST00000556445 CD200P41217 278 aa4.11□□□□□ -1.75
SRP54-211ENST00000556445 FABP6P51161 128 aa4.11□□□□□ -1.75
SRP54-211ENST00000556445 H2BFSP57053 126 aa4.11□□□□□ -1.75
SRP54-211ENST00000556445 PIGPP57054 158 aa4.11□□□□□ -1.75
SRP54-211ENST00000556445 ERVFC1-1P60608 527 aa4.11□□□□□ -1.75
SRP54-211ENST00000556445 UBA52P62987 128 aaKnown RBP4.11□□□□□ -1.75
SRP54-211ENST00000556445 HLA-DRB3P79483 266 aa4.11□□□□□ -1.75
SRP54-211ENST00000556445 ZNF154Q13106 437 aa4.11□□□□□ -1.75
SRP54-211ENST00000556445 GNMTQ14749 295 aa4.11□□□□□ -1.75
SRP54-211ENST00000556445 Q6P435 159 aa4.11□□□□□ -1.75
SRP54-211ENST00000556445 ZNF880Q6PDB4 577 aa4.11□□□□□ -1.75
SRP54-211ENST00000556445 TEX261Q6UWH6 196 aa4.11□□□□□ -1.75
SRP54-211ENST00000556445 ACOT7LQ6ZUV0 252 aa4.11□□□□□ -1.75
SRP54-211ENST00000556445 TMUB2Q71RG4 321 aa4.11□□□□□ -1.75
SRP54-211ENST00000556445 SSX7Q7RTT5 188 aa4.11□□□□□ -1.75
SRP54-211ENST00000556445 SLC51BQ86UW2 128 aa4.11□□□□□ -1.75
SRP54-211ENST00000556445 DOLPP1Q86YN1 238 aa4.11□□□□□ -1.75
SRP54-211ENST00000556445 NUP37Q8NFH4 326 aa4.11□□□□□ -1.75
SRP54-211ENST00000556445 OR10J5Q8NHC4 309 aa4.11□□□□□ -1.75
SRP54-211ENST00000556445 PPP1R1CQ8WVI7 109 aa4.11□□□□□ -1.75
SRP54-211ENST00000556445 RTN4IP1Q8WWV3 396 aaPredicted RBP4.11□□□□□ -1.75
SRP54-211ENST00000556445 MAFIPQ8WZ33 124 aa4.11□□□□□ -1.75
SRP54-211ENST00000556445 IL22RA2Q969J5 263 aa4.11□□□□□ -1.75
SRP54-211ENST00000556445 TMEM230Q96A57 120 aa4.11□□□□□ -1.75
SRP54-211ENST00000556445 S100PBPQ96BU1 408 aa4.11□□□□□ -1.75
SRP54-211ENST00000556445 SPIN2AQ99865 258 aa4.11□□□□□ -1.75
SRP54-211ENST00000556445 SPIN2BQ9BPZ2 258 aa4.11□□□□□ -1.75
SRP54-211ENST00000556445 OVOL2Q9BRP0 275 aa4.11□□□□□ -1.75
SRP54-211ENST00000556445 HDHD3Q9BSH5 251 aaPredicted RBP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms