RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 RPL8P62917 257 aaKnown RBP12.64□□□□□ -0.39
ARHGEF40-207ENST00000556399 GGNQ86UU5 652 aa12.64□□□□□ -0.39
ARHGEF40-207ENST00000556399 MIEN1Q9BRT3 115 aa12.64□□□□□ -0.39
ARHGEF40-207ENST00000556399 TMEM106BQ9NUM4 274 aa12.64□□□□□ -0.39
ARHGEF40-207ENST00000556399 HSPB7Q9UBY9 170 aa12.64□□□□□ -0.39
ARHGEF40-207ENST00000556399 IGFBP2P18065 325 aa12.63□□□□□ -0.39
ARHGEF40-207ENST00000556399 PSG7Q13046 419 aa12.63□□□□□ -0.39
ARHGEF40-207ENST00000556399 ZNF146Q15072 292 aa12.63□□□□□ -0.39
ARHGEF40-207ENST00000556399 PGPA6NDG6 321 aa12.63□□□□□ -0.39
ARHGEF40-207ENST00000556399 PRRX1P54821 245 aa12.63□□□□□ -0.39
ARHGEF40-207ENST00000556399 BPIFA4PQ86YQ2 179 aa12.63□□□□□ -0.39
ARHGEF40-207ENST00000556399 FOXJ2Q9P0K8 574 aa12.63□□□□□ -0.39
ARHGEF40-207ENST00000556399 IFNL4K9M1U5 179 aa12.63□□□□□ -0.39
ARHGEF40-207ENST00000556399 KLF7O75840 302 aaPredicted RBP12.63□□□□□ -0.39
ARHGEF40-207ENST00000556399 ACP1P24666 158 aa12.63□□□□□ -0.39
ARHGEF40-207ENST00000556399 FOXG1P55316 489 aaPredicted RBP12.63□□□□□ -0.39
ARHGEF40-207ENST00000556399 ASCL4Q6XD76 172 aa12.63□□□□□ -0.39
ARHGEF40-207ENST00000556399 WDR31Q8NA23 367 aa12.63□□□□□ -0.39
ARHGEF40-207ENST00000556399 ZNRF1Q8ND25 227 aa12.63□□□□□ -0.39
ARHGEF40-207ENST00000556399 SLC25A10Q9UBX3 287 aaPredicted RBP12.63□□□□□ -0.39
ARHGEF40-207ENST00000556399 MRPS18CQ9Y3D5 142 aaKnown RBP12.63□□□□□ -0.39
ARHGEF40-207ENST00000556399 LOC102724200A0A096LPH7 203 aaPredicted RBP12.63□□□□□ -0.39
ARHGEF40-207ENST00000556399 HYPMO75409 117 aa12.63□□□□□ -0.39
ARHGEF40-207ENST00000556399 CELA3BP08861 270 aa12.63□□□□□ -0.39
ARHGEF40-207ENST00000556399 LHX2P50458 406 aa12.63□□□□□ -0.39
ARHGEF40-207ENST00000556399 SELENOTP62341 195 aa12.63□□□□□ -0.39
ARHGEF40-207ENST00000556399 FOXL2NBQ6ZUU3 175 aa12.63□□□□□ -0.39
ARHGEF40-207ENST00000556399 GBGT1Q8N5D6 347 aa12.63□□□□□ -0.39
ARHGEF40-207ENST00000556399 CACNA1EQ15878 2313 aa12.63□□□□□ -0.39
ARHGEF40-207ENST00000556399 CLEC3BP05452 202 aa12.62□□□□□ -0.39
ARHGEF40-207ENST00000556399 MAS1LP35410 378 aa12.62□□□□□ -0.39
ARHGEF40-207ENST00000556399 TNFSF10P50591 281 aa12.62□□□□□ -0.39
ARHGEF40-207ENST00000556399 FOXC1Q12948 553 aa12.62□□□□□ -0.39
ARHGEF40-207ENST00000556399 DMRTA1Q5VZB9 504 aa12.62□□□□□ -0.39
ARHGEF40-207ENST00000556399 RASL11BQ9BPW5 248 aa12.62□□□□□ -0.39
ARHGEF40-207ENST00000556399 ZNF430Q9H8G1 570 aaPredicted RBP12.62□□□□□ -0.39
ARHGEF40-207ENST00000556399 ONECUT1Q9UBC0 465 aa12.62□□□□□ -0.39
ARHGEF40-207ENST00000556399 PPOXP50336 477 aa12.62□□□□□ -0.39
ARHGEF40-207ENST00000556399 CLDN18P56856 261 aa12.62□□□□□ -0.39
ARHGEF40-207ENST00000556399 PRNTQ86SH4 94 aa12.62□□□□□ -0.39
ARHGEF40-207ENST00000556399 OR8A1Q8NGG7 326 aa12.62□□□□□ -0.39
ARHGEF40-207ENST00000556399 SGK494Q96LW2 274 aa12.62□□□□□ -0.39
ARHGEF40-207ENST00000556399 C19orf24Q9BVV8 132 aa12.62□□□□□ -0.39
ARHGEF40-207ENST00000556399 RNF24Q9Y225 148 aa12.62□□□□□ -0.39
ARHGEF40-207ENST00000556399 TRAV9-1A0A075B6T8 112 aa12.62□□□□□ -0.39
ARHGEF40-207ENST00000556399 LEPROTL1O95214 131 aa12.62□□□□□ -0.39
ARHGEF40-207ENST00000556399 PCP4P48539 62 aa12.62□□□□□ -0.39
ARHGEF40-207ENST00000556399 CCL8P80075 99 aa12.62□□□□□ -0.39
ARHGEF40-207ENST00000556399 TRGV8A0A0C4DH27 118 aa12.61□□□□□ -0.39
ARHGEF40-207ENST00000556399 IDI2-AS1Q9NZ38 188 aa12.61□□□□□ -0.39
ARHGEF40-207ENST00000556399 NCBP2LA6PVI3 153 aaKnown RBP12.61□□□□□ -0.39
ARHGEF40-207ENST00000556399 ZNF785A8K8V0 405 aa12.61□□□□□ -0.39
ARHGEF40-207ENST00000556399 OR4A8P0C604 315 aa12.61□□□□□ -0.39
ARHGEF40-207ENST00000556399 RND2P52198 227 aa12.61□□□□□ -0.39
ARHGEF40-207ENST00000556399 TRIP6Q15654 476 aaKnown RBP12.61□□□□□ -0.39
ARHGEF40-207ENST00000556399 OR4A47Q6IF82 309 aa12.61□□□□□ -0.39
ARHGEF40-207ENST00000556399 OCC1Q8TAD7 63 aa12.61□□□□□ -0.39
ARHGEF40-207ENST00000556399 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.61□□□□□ -0.39
ARHGEF40-207ENST00000556399 PINLYPA6NC86 204 aa12.61□□□□□ -0.39
ARHGEF40-207ENST00000556399 GNB2P62879 340 aa12.61□□□□□ -0.39
ARHGEF40-207ENST00000556399 RPL11P62913 178 aaKnown RBP12.61□□□□□ -0.39
ARHGEF40-207ENST00000556399 Q6ZRM9 215 aa12.61□□□□□ -0.39
ARHGEF40-207ENST00000556399 MIR17HGQ75NE6 70 aa12.61□□□□□ -0.39
ARHGEF40-207ENST00000556399 C5orf17Q8NAS9 161 aa12.61□□□□□ -0.39
ARHGEF40-207ENST00000556399 PGLYRP4Q96LB8 373 aa12.61□□□□□ -0.39
ARHGEF40-207ENST00000556399 RBM14Q96PK6 669 aaKnown RBP12.61□□□□□ -0.39
ARHGEF40-207ENST00000556399 SPOCK3Q9BQ16 436 aa12.61□□□□□ -0.39
ARHGEF40-207ENST00000556399 ETV2O00321 342 aaPredicted RBP12.61□□□□□ -0.39
ARHGEF40-207ENST00000556399 WDR83OSQ9Y284 106 aa12.61□□□□□ -0.39
ARHGEF40-207ENST00000556399 CORTO00230 105 aa12.6□□□□□ -0.39
ARHGEF40-207ENST00000556399 HCP5Q6MZN7 132 aa12.6□□□□□ -0.39
ARHGEF40-207ENST00000556399 Q6ZS49 121 aa12.6□□□□□ -0.39
ARHGEF40-207ENST00000556399 TMEM14EPQ6UXP3 125 aa12.6□□□□□ -0.39
ARHGEF40-207ENST00000556399 FAM222BQ8WU58 562 aa12.6□□□□□ -0.39
ARHGEF40-207ENST00000556399 ZNF714Q96N38 554 aa12.6□□□□□ -0.39
ARHGEF40-207ENST00000556399 AGMATQ9BSE5 352 aa12.6□□□□□ -0.39
ARHGEF40-207ENST00000556399 SEMA5BQ9P283 1151 aa12.6□□□□□ -0.39
ARHGEF40-207ENST00000556399 HIGD1AQ9Y241 93 aa12.6□□□□□ -0.39
ARHGEF40-207ENST00000556399 APC2O95996 2303 aa12.6□□□□□ -0.39
ARHGEF40-207ENST00000556399 PRR33A8MZF0 331 aa12.6□□□□□ -0.39
ARHGEF40-207ENST00000556399 TMEM50AO95807 157 aa12.6□□□□□ -0.39
ARHGEF40-207ENST00000556399 IGHV3-48P01763 117 aa12.6□□□□□ -0.39
ARHGEF40-207ENST00000556399 TFF1P04155 84 aa12.6□□□□□ -0.39
ARHGEF40-207ENST00000556399 ZNF664Q8N3J9 261 aa12.6□□□□□ -0.39
ARHGEF40-207ENST00000556399 GZMBP10144 247 aa12.59□□□□□ -0.39
ARHGEF40-207ENST00000556399 LEMD1Q68G75 181 aa12.59□□□□□ -0.39
ARHGEF40-207ENST00000556399 FAM19A2Q8N3H0 131 aa12.59□□□□□ -0.39
ARHGEF40-207ENST00000556399 KCNS1Q96KK3 526 aa12.59□□□□□ -0.39
ARHGEF40-207ENST00000556399 MRPL32Q9BYC8 188 aaKnown RBP12.59□□□□□ -0.39
ARHGEF40-207ENST00000556399 TMEM177Q53S58 311 aa12.59□□□□□ -0.39
ARHGEF40-207ENST00000556399 TEX38Q6PEX7 206 aa12.59□□□□□ -0.39
ARHGEF40-207ENST00000556399 Q6ZT83 130 aa12.59□□□□□ -0.39
ARHGEF40-207ENST00000556399 LINC01551Q86U37 167 aa12.59□□□□□ -0.39
ARHGEF40-207ENST00000556399 ZDBF2Q9HCK1 2354 aa12.59□□□□□ -0.39
ARHGEF40-207ENST00000556399 TMSB15BA0A087X1C1 80 aa12.59□□□□□ -0.39
ARHGEF40-207ENST00000556399 IQCF6A8MYZ5 107 aa12.59□□□□□ -0.39
ARHGEF40-207ENST00000556399 BTF3P20290 206 aaKnown RBP12.59□□□□□ -0.39
ARHGEF40-207ENST00000556399 ACTL10Q5JWF8 245 aa12.59□□□□□ -0.39
ARHGEF40-207ENST00000556399 ATP1A1-AS1Q5TC04 95 aa12.59□□□□□ -0.39
ARHGEF40-207ENST00000556399 VWA1Q6PCB0 445 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms