RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 MEF2DQ14814 521 aa11.74□□□□□ -0.53
ACTN1-217ENST00000556203 FAAP20Q6NZ36 180 aa11.74□□□□□ -0.53
ACTN1-217ENST00000556203 TTC9CQ8N5M4 171 aa11.74□□□□□ -0.53
ACTN1-217ENST00000556203 SOSTQ9BQB4 213 aa11.74□□□□□ -0.53
ACTN1-217ENST00000556203 DPPA5A6NC42 116 aa11.73□□□□□ -0.53
ACTN1-217ENST00000556203 GSTZ1O43708 216 aaPredicted RBP11.73□□□□□ -0.53
ACTN1-217ENST00000556203 KRASP01116 189 aa11.73□□□□□ -0.53
ACTN1-217ENST00000556203 HSPB1P04792 205 aaKnown RBP11.73□□□□□ -0.53
ACTN1-217ENST00000556203 G6PCP35575 357 aa11.73□□□□□ -0.53
ACTN1-217ENST00000556203 SLURP1P55000 103 aa11.73□□□□□ -0.53
ACTN1-217ENST00000556203 SLC25A42Q86VD7 318 aa11.73□□□□□ -0.53
ACTN1-217ENST00000556203 TERB2Q8NHR7 220 aa11.73□□□□□ -0.53
ACTN1-217ENST00000556203 DCUN1D4Q92564 292 aa11.73□□□□□ -0.53
ACTN1-217ENST00000556203 ZNF486Q96H40 463 aaPredicted RBP11.73□□□□□ -0.53
ACTN1-217ENST00000556203 USMG5Q96IX5 58 aa11.73□□□□□ -0.53
ACTN1-217ENST00000556203 AURKAIP1Q9NWT8 199 aaPredicted RBP11.73□□□□□ -0.53
ACTN1-217ENST00000556203 MEGF8Q7Z7M0 2845 aa11.73□□□□□ -0.53
ACTN1-217ENST00000556203 NOTCH1P46531 2555 aa11.72□□□□□ -0.53
ACTN1-217ENST00000556203 SEC14L6B5MCN3 397 aa11.72□□□□□ -0.53
ACTN1-217ENST00000556203 RBMXL2O75526 392 aaKnown RBP11.72□□□□□ -0.53
ACTN1-217ENST00000556203 AKAIN1P0CW23 69 aa11.72□□□□□ -0.53
ACTN1-217ENST00000556203 AREGP15514 252 aa11.72□□□□□ -0.53
ACTN1-217ENST00000556203 S100A5P33763 92 aa11.72□□□□□ -0.53
ACTN1-217ENST00000556203 PIGPP57054 158 aa11.72□□□□□ -0.53
ACTN1-217ENST00000556203 OR2B8PP59922 312 aa11.72□□□□□ -0.53
ACTN1-217ENST00000556203 KRTAP10-11P60412 298 aa11.72□□□□□ -0.53
ACTN1-217ENST00000556203 RND3P61587 244 aa11.72□□□□□ -0.53
ACTN1-217ENST00000556203 RHOGP84095 191 aa11.72□□□□□ -0.53
ACTN1-217ENST00000556203 ZNF45Q02386 682 aa11.72□□□□□ -0.53
ACTN1-217ENST00000556203 REC114Q7Z4M0 266 aa11.72□□□□□ -0.53
ACTN1-217ENST00000556203 OR13C8Q8NGS7 320 aa11.72□□□□□ -0.53
ACTN1-217ENST00000556203 COMMD5Q9GZQ3 224 aa11.72□□□□□ -0.53
ACTN1-217ENST00000556203 FAM212BQ9NTI7 297 aaPredicted RBP11.72□□□□□ -0.53
ACTN1-217ENST00000556203 ZNF257Q9Y2Q1 563 aa11.72□□□□□ -0.53
ACTN1-217ENST00000556203 ANKRD34BA5PLL1 514 aa11.71□□□□□ -0.53
ACTN1-217ENST00000556203 CGB1A6NKQ9 187 aa11.71□□□□□ -0.53
ACTN1-217ENST00000556203 NPIPB5A8MRT5 1133 aa11.71□□□□□ -0.53
ACTN1-217ENST00000556203 DISC1C4P0D8 188 aa11.71□□□□□ -0.53
ACTN1-217ENST00000556203 EGFEM1PQ0D2K5 195 aa11.71□□□□□ -0.53
ACTN1-217ENST00000556203 C9orf66Q5T8R8 295 aa11.71□□□□□ -0.53
ACTN1-217ENST00000556203 C19orf35Q6ZS72 473 aa11.71□□□□□ -0.53
ACTN1-217ENST00000556203 OR4C16Q8NGL9 310 aa11.71□□□□□ -0.53
ACTN1-217ENST00000556203 ZFAND1Q8TCF1 268 aa11.71□□□□□ -0.53
ACTN1-217ENST00000556203 MARCH1Q8TCQ1 289 aa11.71□□□□□ -0.53
ACTN1-217ENST00000556203 DLX4Q92988 240 aaPredicted RBP11.71□□□□□ -0.53
ACTN1-217ENST00000556203 MRGPRFQ96AM1 343 aa11.71□□□□□ -0.53
ACTN1-217ENST00000556203 RANGRFQ9HD47 186 aaPredicted RBP11.71□□□□□ -0.53
ACTN1-217ENST00000556203 AKIP1Q9NQ31 210 aa11.71□□□□□ -0.53
ACTN1-217ENST00000556203 NSG2Q9Y328 171 aa11.71□□□□□ -0.53
ACTN1-217ENST00000556203 TNCP24821 2201 aa11.71□□□□□ -0.54
ACTN1-217ENST00000556203 TRBV9A0A0B4J1U6 114 aa11.7□□□□□ -0.54
ACTN1-217ENST00000556203 ANKRD20A5PA0PJZ0 165 aa11.7□□□□□ -0.54
ACTN1-217ENST00000556203 FAM223BA6NKX1 122 aa11.7□□□□□ -0.54
ACTN1-217ENST00000556203 OVOL1O14753 267 aa11.7□□□□□ -0.54
ACTN1-217ENST00000556203 OR2J3O76001 311 aa11.7□□□□□ -0.54
ACTN1-217ENST00000556203 REG1AP05451 166 aa11.7□□□□□ -0.54
ACTN1-217ENST00000556203 SERPINE2P07093 398 aa11.7□□□□□ -0.54
ACTN1-217ENST00000556203 CRYGCP07315 174 aa11.7□□□□□ -0.54
ACTN1-217ENST00000556203 FGF2P09038 288 aa11.7□□□□□ -0.54
ACTN1-217ENST00000556203 PTBP1P26599 531 aaKnown RBP eCLIP11.7□□□□□ -0.54
ACTN1-217ENST00000556203 PSMB6P28072 239 aa11.7□□□□□ -0.54
ACTN1-217ENST00000556203 ATP5G2Q06055 141 aa11.7□□□□□ -0.54
ACTN1-217ENST00000556203 PYDC2Q56P42 97 aa11.7□□□□□ -0.54
ACTN1-217ENST00000556203 ZNF343Q6P1L6 599 aa11.7□□□□□ -0.54
ACTN1-217ENST00000556203 FAM223AQ8IWN6 122 aa11.7□□□□□ -0.54
ACTN1-217ENST00000556203 THAP7Q9BT49 309 aaPredicted RBP11.7□□□□□ -0.54
ACTN1-217ENST00000556203 QTRT1Q9BXR0 403 aaKnown RBP11.7□□□□□ -0.54
ACTN1-217ENST00000556203 COPZ2Q9P299 210 aa11.7□□□□□ -0.54
ACTN1-217ENST00000556203 V9GYH0 126 aa11.7□□□□□ -0.54
ACTN1-217ENST00000556203 H0Y980 276 aa11.69□□□□□ -0.54
ACTN1-217ENST00000556203 SNAPC5O75971 98 aa11.69□□□□□ -0.54
ACTN1-217ENST00000556203 IGKV1-39P01597 117 aa11.69□□□□□ -0.54
ACTN1-217ENST00000556203 TRBV12-3P01733 135 aa11.69□□□□□ -0.54
ACTN1-217ENST00000556203 IGKV1D-39P04432 117 aa11.69□□□□□ -0.54
ACTN1-217ENST00000556203 CTSDP07339 412 aaPredicted RBP11.69□□□□□ -0.54
ACTN1-217ENST00000556203 CTRB1P17538 263 aa11.69□□□□□ -0.54
ACTN1-217ENST00000556203 ZP3P21754 424 aa11.69□□□□□ -0.54
ACTN1-217ENST00000556203 ECI1P42126 302 aa11.69□□□□□ -0.54
ACTN1-217ENST00000556203 CTRB2Q6GPI1 263 aa11.69□□□□□ -0.54
ACTN1-217ENST00000556203 CADM3Q8N126 398 aa11.69□□□□□ -0.54
ACTN1-217ENST00000556203 CCDC71LQ8N9Z2 235 aa11.69□□□□□ -0.54
ACTN1-217ENST00000556203 NECAP1Q8NC96 275 aa11.69□□□□□ -0.54
ACTN1-217ENST00000556203 MRAPQ8TCY5 172 aa11.69□□□□□ -0.54
ACTN1-217ENST00000556203 TP53RKQ96S44 253 aa11.69□□□□□ -0.54
ACTN1-217ENST00000556203 PRRT1Q99946 306 aa11.69□□□□□ -0.54
ACTN1-217ENST00000556203 PEF1Q9UBV8 284 aaKnown RBP11.69□□□□□ -0.54
ACTN1-217ENST00000556203 PRNDQ9UKY0 176 aa11.69□□□□□ -0.54
ACTN1-217ENST00000556203 OR51B2Q9Y5P1 312 aa11.69□□□□□ -0.54
ACTN1-217ENST00000556203 C3orf85A0A1B0GTC6 90 aa11.68□□□□□ -0.54
ACTN1-217ENST00000556203 TEX50A0A1B0GTY4 177 aa11.68□□□□□ -0.54
ACTN1-217ENST00000556203 IGLC7A0M8Q6 106 aa11.68□□□□□ -0.54
ACTN1-217ENST00000556203 DHFRP00374 187 aa11.68□□□□□ -0.54
ACTN1-217ENST00000556203 DEFA4P12838 97 aa11.68□□□□□ -0.54
ACTN1-217ENST00000556203 EXOSC2Q13868 293 aaKnown RBP11.68□□□□□ -0.54
ACTN1-217ENST00000556203 SURF2Q15527 256 aaPredicted RBP11.68□□□□□ -0.54
ACTN1-217ENST00000556203 ZNF79Q15937 498 aa11.68□□□□□ -0.54
ACTN1-217ENST00000556203 C15orf32Q32M92 178 aa11.68□□□□□ -0.54
ACTN1-217ENST00000556203 CCDC190Q86UF4 302 aa11.68□□□□□ -0.54
ACTN1-217ENST00000556203 OR51S1Q8NGJ8 323 aa11.68□□□□□ -0.54
ACTN1-217ENST00000556203 OR1L8Q8NGR8 309 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms