RNA–Protein interactions for RNA: ENST00000555563.5

SHMT2-219, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-219ENST00000555563 HSPB1P04792 205 aaKnown RBP10.57□□□□□ -0.72
SHMT2-219ENST00000555563 ZNF735P0CB33 412 aa10.57□□□□□ -0.72
SHMT2-219ENST00000555563 PGAM2P15259 253 aa10.57□□□□□ -0.72
SHMT2-219ENST00000555563 AREGP15514 252 aa10.57□□□□□ -0.72
SHMT2-219ENST00000555563 S100GP29377 79 aa10.57□□□□□ -0.72
SHMT2-219ENST00000555563 LPAR6P43657 344 aa10.57□□□□□ -0.72
SHMT2-219ENST00000555563 PPP5CP53041 499 aa10.57□□□□□ -0.72
SHMT2-219ENST00000555563 ERVK-16P61578 105 aa10.57□□□□□ -0.72
SHMT2-219ENST00000555563 RHOGP84095 191 aa10.57□□□□□ -0.72
SHMT2-219ENST00000555563 SSBP1Q04837 148 aaKnown RBP10.57□□□□□ -0.72
SHMT2-219ENST00000555563 ZNF585BQ52M93 769 aa10.57□□□□□ -0.72
SHMT2-219ENST00000555563 FAAP20Q6NZ36 180 aa10.57□□□□□ -0.72
SHMT2-219ENST00000555563 STEAP1BQ6NZ63 245 aa10.57□□□□□ -0.72
SHMT2-219ENST00000555563 TTC9CQ8N5M4 171 aa10.57□□□□□ -0.72
SHMT2-219ENST00000555563 DLX4Q92988 240 aaPredicted RBP10.57□□□□□ -0.72
SHMT2-219ENST00000555563 SLC2A9Q9NRM0 540 aa10.57□□□□□ -0.72
SHMT2-219ENST00000555563 RSL24D1Q9UHA3 163 aaKnown RBP10.57□□□□□ -0.72
SHMT2-219ENST00000555563 ZNF257Q9Y2Q1 563 aa10.57□□□□□ -0.72
SHMT2-219ENST00000555563 TRBV9A0A0B4J1U6 114 aa10.56□□□□□ -0.72
SHMT2-219ENST00000555563 WI2-2373I1.2A0A1W2PRP0 233 aa10.56□□□□□ -0.72
SHMT2-219ENST00000555563 ANKRD34BA5PLL1 514 aa10.56□□□□□ -0.72
SHMT2-219ENST00000555563 FAM223BA6NKX1 122 aa10.56□□□□□ -0.72
SHMT2-219ENST00000555563 K7EIL1 84 aa10.56□□□□□ -0.72
SHMT2-219ENST00000555563 OVOL1O14753 267 aa10.56□□□□□ -0.72
SHMT2-219ENST00000555563 PI3P19957 117 aa10.56□□□□□ -0.72
SHMT2-219ENST00000555563 G6PCP35575 357 aa10.56□□□□□ -0.72
SHMT2-219ENST00000555563 OR2B8PP59922 312 aa10.56□□□□□ -0.72
SHMT2-219ENST00000555563 ZNF343Q6P1L6 599 aa10.56□□□□□ -0.72
SHMT2-219ENST00000555563 SLC25A42Q86VD7 318 aa10.56□□□□□ -0.72
SHMT2-219ENST00000555563 FAM223AQ8IWN6 122 aa10.56□□□□□ -0.72
SHMT2-219ENST00000555563 USMG5Q96IX5 58 aa10.56□□□□□ -0.72
SHMT2-219ENST00000555563 AKIP1Q9NQ31 210 aa10.56□□□□□ -0.72
SHMT2-219ENST00000555563 RABL2AQ9UBK7 228 aaPredicted RBP10.56□□□□□ -0.72
SHMT2-219ENST00000555563 RABL2BQ9UNT1 228 aa10.56□□□□□ -0.72
SHMT2-219ENST00000555563 DPPA5A6NC42 116 aa10.55□□□□□ -0.72
SHMT2-219ENST00000555563 NPIPB5A8MRT5 1133 aa10.55□□□□□ -0.72
SHMT2-219ENST00000555563 KRASP01116 189 aa10.55□□□□□ -0.72
SHMT2-219ENST00000555563 TRBV12-3P01733 135 aa10.55□□□□□ -0.72
SHMT2-219ENST00000555563 REG1AP05451 166 aa10.55□□□□□ -0.72
SHMT2-219ENST00000555563 FGF2P09038 288 aa10.55□□□□□ -0.72
SHMT2-219ENST00000555563 TNFSF8P32971 234 aa10.55□□□□□ -0.72
SHMT2-219ENST00000555563 EXOSC2Q13868 293 aaKnown RBP10.55□□□□□ -0.72
SHMT2-219ENST00000555563 SCGB2B2Q4G0G5 96 aa10.55□□□□□ -0.72
SHMT2-219ENST00000555563 ZNF486Q96H40 463 aaPredicted RBP10.55□□□□□ -0.72
SHMT2-219ENST00000555563 COMMD5Q9GZQ3 224 aa10.55□□□□□ -0.72
SHMT2-219ENST00000555563 RANGRFQ9HD47 186 aaPredicted RBP10.55□□□□□ -0.72
SHMT2-219ENST00000555563 FAM212BQ9NTI7 297 aaPredicted RBP10.55□□□□□ -0.72
SHMT2-219ENST00000555563 IGLC7A0M8Q6 106 aa10.54□□□□□ -0.72
SHMT2-219ENST00000555563 GSTZ1O43708 216 aaPredicted RBP10.54□□□□□ -0.72
SHMT2-219ENST00000555563 OR2J3O76001 311 aa10.54□□□□□ -0.72
SHMT2-219ENST00000555563 ZP3P21754 424 aa10.54□□□□□ -0.72
SHMT2-219ENST00000555563 PSMB6P28072 239 aa10.54□□□□□ -0.72
SHMT2-219ENST00000555563 PIGPP57054 158 aa10.54□□□□□ -0.72
SHMT2-219ENST00000555563 RND3P61587 244 aa10.54□□□□□ -0.72
SHMT2-219ENST00000555563 MEF2DQ14814 521 aa10.54□□□□□ -0.72
SHMT2-219ENST00000555563 NECAP1Q8NC96 275 aa10.54□□□□□ -0.72
SHMT2-219ENST00000555563 OR13C8Q8NGS7 320 aa10.54□□□□□ -0.72
SHMT2-219ENST00000555563 MRGPRFQ96AM1 343 aa10.54□□□□□ -0.72
SHMT2-219ENST00000555563 SOSTQ9BQB4 213 aa10.54□□□□□ -0.72
SHMT2-219ENST00000555563 NSG2Q9Y328 171 aa10.54□□□□□ -0.72
SHMT2-219ENST00000555563 H0Y980 276 aa10.53□□□□□ -0.72
SHMT2-219ENST00000555563 ZNF701M0R085 212 aaPredicted RBP10.53□□□□□ -0.72
SHMT2-219ENST00000555563 SAP30O75446 220 aa10.53□□□□□ -0.72
SHMT2-219ENST00000555563 IGKV1-39P01597 117 aa10.53□□□□□ -0.72
SHMT2-219ENST00000555563 IGKV1D-39P04432 117 aa10.53□□□□□ -0.72
SHMT2-219ENST00000555563 CRYGCP07315 174 aa10.53□□□□□ -0.72
SHMT2-219ENST00000555563 AKAIN1P0CW23 69 aa10.53□□□□□ -0.72
SHMT2-219ENST00000555563 CTRB1P17538 263 aa10.53□□□□□ -0.72
SHMT2-219ENST00000555563 PTBP1P26599 531 aaKnown RBP eCLIP10.53□□□□□ -0.72
SHMT2-219ENST00000555563 ATP5G2Q06055 141 aa10.53□□□□□ -0.72
SHMT2-219ENST00000555563 C15orf32Q32M92 178 aa10.53□□□□□ -0.72
SHMT2-219ENST00000555563 CTRB2Q6GPI1 263 aa10.53□□□□□ -0.72
SHMT2-219ENST00000555563 ACSM6Q6P461 480 aa10.53□□□□□ -0.72
SHMT2-219ENST00000555563 CADM3Q8N126 398 aa10.53□□□□□ -0.72
SHMT2-219ENST00000555563 OR4C16Q8NGL9 310 aa10.53□□□□□ -0.72
SHMT2-219ENST00000555563 TERB2Q8NHR7 220 aa10.53□□□□□ -0.72
SHMT2-219ENST00000555563 MARCH1Q8TCQ1 289 aa10.53□□□□□ -0.72
SHMT2-219ENST00000555563 FANCD2OSQ96PS1 177 aa10.53□□□□□ -0.72
SHMT2-219ENST00000555563 QTRT1Q9BXR0 403 aaKnown RBP10.53□□□□□ -0.72
SHMT2-219ENST00000555563 PEF1Q9UBV8 284 aaKnown RBP10.53□□□□□ -0.72
SHMT2-219ENST00000555563 FABP12A6NFH5 140 aa10.52□□□□□ -0.73
SHMT2-219ENST00000555563 SNAPC5O75971 98 aa10.52□□□□□ -0.73
SHMT2-219ENST00000555563 ECI1P42126 302 aa10.52□□□□□ -0.73
SHMT2-219ENST00000555563 INSL3P51460 131 aa10.52□□□□□ -0.73
SHMT2-219ENST00000555563 ZNF429Q86V71 674 aa10.52□□□□□ -0.73
SHMT2-219ENST00000555563 OR10W1Q8NGF6 305 aa10.52□□□□□ -0.73
SHMT2-219ENST00000555563 ZFAND1Q8TCF1 268 aa10.52□□□□□ -0.73
SHMT2-219ENST00000555563 SEC22AQ96IW7 307 aa10.52□□□□□ -0.73
SHMT2-219ENST00000555563 TP53RKQ96S44 253 aa10.52□□□□□ -0.73
SHMT2-219ENST00000555563 SRSF8Q9BRL6 282 aaKnown RBP10.52□□□□□ -0.73
SHMT2-219ENST00000555563 COPZ2Q9P299 210 aa10.52□□□□□ -0.73
SHMT2-219ENST00000555563 ZMAT5Q9UDW3 170 aaKnown RBP10.52□□□□□ -0.73
SHMT2-219ENST00000555563 FBXL7Q9UJT9 491 aa10.52□□□□□ -0.73
SHMT2-219ENST00000555563 PRNDQ9UKY0 176 aa10.52□□□□□ -0.73
SHMT2-219ENST00000555563 OR51B2Q9Y5P1 312 aa10.52□□□□□ -0.73
SHMT2-219ENST00000555563 V9GYH0 126 aa10.52□□□□□ -0.73
SHMT2-219ENST00000555563 IGLV11-55A0A075B6I3 123 aa10.51□□□□□ -0.73
SHMT2-219ENST00000555563 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.51□□□□□ -0.73
SHMT2-219ENST00000555563 TEX50A0A1B0GTY4 177 aa10.51□□□□□ -0.73
SHMT2-219ENST00000555563 ANKRD20A5PA0PJZ0 165 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms