RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 SFT2D2O95562 160 aa3.65□□□□□ -1.83
ATXN3-227ENST00000554491 PMS2P2O95744 297 aa3.65□□□□□ -1.83
ATXN3-227ENST00000554491 EML2O95834 649 aa3.65□□□□□ -1.83
ATXN3-227ENST00000554491 TBX6O95947 436 aaPredicted RBP3.65□□□□□ -1.83
ATXN3-227ENST00000554491 WNT1P04628 370 aa3.65□□□□□ -1.83
ATXN3-227ENST00000554491 HPNP05981 417 aa3.65□□□□□ -1.83
ATXN3-227ENST00000554491 SEC11BP0C7V7 166 aa3.65□□□□□ -1.83
ATXN3-227ENST00000554491 PYCR1P32322 319 aa3.65□□□□□ -1.83
ATXN3-227ENST00000554491 FAUP35544 74 aaKnown RBP3.65□□□□□ -1.83
ATXN3-227ENST00000554491 GPR1P46091 355 aa3.65□□□□□ -1.83
ATXN3-227ENST00000554491 ZNF121P58317 390 aaPredicted RBP3.65□□□□□ -1.83
ATXN3-227ENST00000554491 SEC11AP67812 179 aa3.65□□□□□ -1.83
ATXN3-227ENST00000554491 TNFAIP6P98066 277 aaPredicted RBP3.65□□□□□ -1.83
ATXN3-227ENST00000554491 ACSM2AQ08AH3 577 aa3.65□□□□□ -1.83
ATXN3-227ENST00000554491 KLRD1Q13241 179 aa3.65□□□□□ -1.83
ATXN3-227ENST00000554491 PMCHL1Q16048 86 aa3.65□□□□□ -1.83
ATXN3-227ENST00000554491 VWC2Q2TAL6 325 aa3.65□□□□□ -1.83
ATXN3-227ENST00000554491 TIGITQ495A1 244 aa3.65□□□□□ -1.83
ATXN3-227ENST00000554491 FFAR4Q5NUL3 377 aa3.65□□□□□ -1.83
ATXN3-227ENST00000554491 OTPQ5XKR4 325 aa3.65□□□□□ -1.83
ATXN3-227ENST00000554491 ACSM2BQ68CK6 577 aa3.65□□□□□ -1.83
ATXN3-227ENST00000554491 DGAT2L7PQ6IED9 249 aa3.65□□□□□ -1.83
ATXN3-227ENST00000554491 OR2T5Q6IEZ7 315 aa3.65□□□□□ -1.83
ATXN3-227ENST00000554491 CEACAM20Q6UY09 585 aa3.65□□□□□ -1.83
ATXN3-227ENST00000554491 ADAMTSL5Q6ZMM2 481 aa3.65□□□□□ -1.83
ATXN3-227ENST00000554491 Q6ZVH6 145 aa3.65□□□□□ -1.83
ATXN3-227ENST00000554491 FAM19A5Q7Z5A7 132 aaPredicted RBP3.65□□□□□ -1.83
ATXN3-227ENST00000554491 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.65□□□□□ -1.83
ATXN3-227ENST00000554491 OR2L13Q8N349 312 aa3.65□□□□□ -1.83
ATXN3-227ENST00000554491 TEX29Q8N6K0 151 aa3.65□□□□□ -1.83
ATXN3-227ENST00000554491 IQCF1Q8N6M8 205 aa3.65□□□□□ -1.83
ATXN3-227ENST00000554491 PTGR2Q8N8N7 351 aaPredicted RBP3.65□□□□□ -1.83
ATXN3-227ENST00000554491 OR8G5Q8NG78 346 aa3.65□□□□□ -1.83
ATXN3-227ENST00000554491 OR10S1Q8NGN2 331 aa3.65□□□□□ -1.83
ATXN3-227ENST00000554491 OR13A1Q8NGR1 328 aa3.65□□□□□ -1.83
ATXN3-227ENST00000554491 OR2T29Q8NH02 315 aa3.65□□□□□ -1.83
ATXN3-227ENST00000554491 SLC38A5Q8WUX1 472 aa3.65□□□□□ -1.83
ATXN3-227ENST00000554491 RNF138Q8WVD3 245 aa3.65□□□□□ -1.83
ATXN3-227ENST00000554491 SMIM4Q8WVI0 70 aa3.65□□□□□ -1.83
ATXN3-227ENST00000554491 TMED6Q8WW62 240 aa3.65□□□□□ -1.83
ATXN3-227ENST00000554491 MBD3L1Q8WWY6 194 aa3.65□□□□□ -1.83
ATXN3-227ENST00000554491 BAALCQ8WXS3 180 aa3.65□□□□□ -1.83
ATXN3-227ENST00000554491 OVCA2Q8WZ82 227 aa3.65□□□□□ -1.83
ATXN3-227ENST00000554491 OR5P3Q8WZ94 311 aa3.65□□□□□ -1.83
ATXN3-227ENST00000554491 C10orf35Q96D05 121 aa3.65□□□□□ -1.83
ATXN3-227ENST00000554491 STARD4Q96DR4 205 aa3.65□□□□□ -1.83
ATXN3-227ENST00000554491 SPIN2AQ99865 258 aa3.65□□□□□ -1.83
ATXN3-227ENST00000554491 SPIN2BQ9BPZ2 258 aa3.65□□□□□ -1.83
ATXN3-227ENST00000554491 SPANXDQ9BXN6 97 aa3.65□□□□□ -1.83
ATXN3-227ENST00000554491 OR2D2Q9H210 308 aa3.65□□□□□ -1.83
ATXN3-227ENST00000554491 IFI27L2Q9H2X8 130 aa3.65□□□□□ -1.83
ATXN3-227ENST00000554491 ST20Q9HBF5 79 aa3.65□□□□□ -1.83
ATXN3-227ENST00000554491 SLC52A3Q9NQ40 469 aa3.65□□□□□ -1.83
ATXN3-227ENST00000554491 CYTL1Q9NRR1 136 aa3.65□□□□□ -1.83
ATXN3-227ENST00000554491 DCAF13Q9NV06 445 aaKnown RBP3.65□□□□□ -1.83
ATXN3-227ENST00000554491 NUDT4Q9NZJ9 180 aa3.65□□□□□ -1.83
ATXN3-227ENST00000554491 ABRACLQ9P1F3 81 aa3.65□□□□□ -1.83
ATXN3-227ENST00000554491 DEC1Q9P2X7 70 aa3.65□□□□□ -1.83
ATXN3-227ENST00000554491 RPL36Q9Y3U8 105 aaKnown RBP3.65□□□□□ -1.83
ATXN3-227ENST00000554491 A0A1W2PPI3 338 aa3.64□□□□□ -1.83
ATXN3-227ENST00000554491 FAM90A7PA6NKC0 464 aa3.64□□□□□ -1.83
ATXN3-227ENST00000554491 SH2D7A6NKC9 451 aaPredicted RBP3.64□□□□□ -1.83
ATXN3-227ENST00000554491 TMEM212A6NML5 194 aa3.64□□□□□ -1.83
ATXN3-227ENST00000554491 FAM90A22PA8MWA6 464 aa3.64□□□□□ -1.83
ATXN3-227ENST00000554491 FAM90A12PA8MX19 464 aa3.64□□□□□ -1.83
ATXN3-227ENST00000554491 FAM90A23PA8MXZ1 464 aa3.64□□□□□ -1.83
ATXN3-227ENST00000554491 C9JAW5 83 aa3.64□□□□□ -1.83
ATXN3-227ENST00000554491 F8W1H4 67 aa3.64□□□□□ -1.83
ATXN3-227ENST00000554491 H0YJW9 148 aa3.64□□□□□ -1.83
ATXN3-227ENST00000554491 H3BRM9 83 aa3.64□□□□□ -1.83
ATXN3-227ENST00000554491 RER1O15258 196 aa3.64□□□□□ -1.83
ATXN3-227ENST00000554491 HCRTO43612 131 aa3.64□□□□□ -1.83
ATXN3-227ENST00000554491 SYNGR1O43759 233 aa3.64□□□□□ -1.83
ATXN3-227ENST00000554491 ZNF354AO60765 605 aaPredicted RBP3.64□□□□□ -1.83
ATXN3-227ENST00000554491 FCGR3BO75015 233 aa3.64□□□□□ -1.83
ATXN3-227ENST00000554491 DHRS3O75911 302 aa3.64□□□□□ -1.83
ATXN3-227ENST00000554491 HRASP01112 189 aa3.64□□□□□ -1.83
ATXN3-227ENST00000554491 KRASP01116 189 aa3.64□□□□□ -1.83
ATXN3-227ENST00000554491 IGLV3-27P01718 113 aa3.64□□□□□ -1.83
ATXN3-227ENST00000554491 LINC00032P0C843 101 aa3.64□□□□□ -1.83
ATXN3-227ENST00000554491 NTF3P20783 257 aa3.64□□□□□ -1.83
ATXN3-227ENST00000554491 GNLYP22749 145 aa3.64□□□□□ -1.83
ATXN3-227ENST00000554491 PPIBP23284 216 aaKnown RBP3.64□□□□□ -1.83
ATXN3-227ENST00000554491 RPL12P30050 165 aaKnown RBP3.64□□□□□ -1.83
ATXN3-227ENST00000554491 G6PCP35575 357 aa3.64□□□□□ -1.83
ATXN3-227ENST00000554491 ZNF93P35789 620 aaPredicted RBP3.64□□□□□ -1.83
ATXN3-227ENST00000554491 SRP14P37108 136 aaKnown RBP3.64□□□□□ -1.83
ATXN3-227ENST00000554491 LPAR6P43657 344 aa3.64□□□□□ -1.83
ATXN3-227ENST00000554491 POLR2JP52435 117 aaKnown RBP3.64□□□□□ -1.83
ATXN3-227ENST00000554491 PGGT1BP53609 377 aa3.64□□□□□ -1.83
ATXN3-227ENST00000554491 EMP1P54849 157 aa3.64□□□□□ -1.83
ATXN3-227ENST00000554491 SNRPGP62308 76 aaKnown RBP3.64□□□□□ -1.83
ATXN3-227ENST00000554491 CYCSP99999 105 aaKnown RBP3.64□□□□□ -1.83
ATXN3-227ENST00000554491 FOXF1Q12946 379 aa3.64□□□□□ -1.83
ATXN3-227ENST00000554491 PSG7Q13046 419 aa3.64□□□□□ -1.83
ATXN3-227ENST00000554491 FHL3Q13643 280 aa3.64□□□□□ -1.83
ATXN3-227ENST00000554491 MS4A13Q5J8X5 152 aa3.64□□□□□ -1.83
ATXN3-227ENST00000554491 ACTL10Q5JWF8 245 aa3.64□□□□□ -1.83
ATXN3-227ENST00000554491 UBE2NLQ5JXB2 153 aa3.64□□□□□ -1.83
ATXN3-227ENST00000554491 GLYATL3Q5SZD4 288 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms