RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 CDH26Q8IXH8 852 aa4.9□□□□□ -1.63
ATXN3-224ENST00000554040 MMD2Q8IY49 270 aa4.9□□□□□ -1.63
ATXN3-224ENST00000554040 SETD6Q8TBK2 473 aa4.9□□□□□ -1.63
ATXN3-224ENST00000554040 TMEM190Q8WZ59 177 aa4.9□□□□□ -1.63
ATXN3-224ENST00000554040 LGALS12Q96DT0 336 aa4.9□□□□□ -1.63
ATXN3-224ENST00000554040 FYTTD1Q96QD9 318 aaKnown RBP4.9□□□□□ -1.63
ATXN3-224ENST00000554040 THTPAQ9BU02 230 aa4.9□□□□□ -1.63
ATXN3-224ENST00000554040 SCRT1Q9BWW7 348 aa4.9□□□□□ -1.63
ATXN3-224ENST00000554040 RIMS4Q9H426 269 aaPredicted RBP4.9□□□□□ -1.63
ATXN3-224ENST00000554040 CHMP1AQ9HD42 196 aaPredicted RBP4.9□□□□□ -1.63
ATXN3-224ENST00000554040 DAZ1Q9NQZ3 744 aaKnown RBP4.9□□□□□ -1.63
ATXN3-224ENST00000554040 SLC2A9Q9NRM0 540 aa4.9□□□□□ -1.63
ATXN3-224ENST00000554040 SDHAF2Q9NX18 166 aa4.9□□□□□ -1.63
ATXN3-224ENST00000554040 IMPAD1Q9NX62 359 aa4.9□□□□□ -1.63
ATXN3-224ENST00000554040 DPPA5A6NC42 116 aa4.89□□□□□ -1.63
ATXN3-224ENST00000554040 MFSD2BA6NFX1 497 aa4.89□□□□□ -1.63
ATXN3-224ENST00000554040 SNTNA6NMZ2 147 aa4.89□□□□□ -1.63
ATXN3-224ENST00000554040 ZNF705EA8MWA4 302 aaPredicted RBP4.89□□□□□ -1.63
ATXN3-224ENST00000554040 E7EUB6 86 aa4.89□□□□□ -1.63
ATXN3-224ENST00000554040 CREBL2O60519 120 aaPredicted RBP4.89□□□□□ -1.63
ATXN3-224ENST00000554040 CRYZL1O95825 349 aa4.89□□□□□ -1.63
ATXN3-224ENST00000554040 DHFRP00374 187 aa4.89□□□□□ -1.63
ATXN3-224ENST00000554040 GIG44P09565 113 aaPredicted RBP4.89□□□□□ -1.63
ATXN3-224ENST00000554040 HIST1H1BP16401 226 aaKnown RBP4.89□□□□□ -1.63
ATXN3-224ENST00000554040 MALP21145 153 aa4.89□□□□□ -1.63
ATXN3-224ENST00000554040 HLA-DRB3P79483 266 aa4.89□□□□□ -1.63
ATXN3-224ENST00000554040 IRF3Q14653 427 aa4.89□□□□□ -1.63
ATXN3-224ENST00000554040 CDK10Q15131 360 aa4.89□□□□□ -1.63
ATXN3-224ENST00000554040 LIPKQ5VXJ0 399 aa4.89□□□□□ -1.63
ATXN3-224ENST00000554040 MEDAGQ5VYS4 303 aa4.89□□□□□ -1.63
ATXN3-224ENST00000554040 RPL22L1Q6P5R6 122 aaKnown RBP4.89□□□□□ -1.63
ATXN3-224ENST00000554040 SPATA12Q7Z6I5 190 aa4.89□□□□□ -1.63
ATXN3-224ENST00000554040 SPATA24Q86W54 205 aa4.89□□□□□ -1.63
ATXN3-224ENST00000554040 OSR1Q8TAX0 266 aaPredicted RBP4.89□□□□□ -1.63
ATXN3-224ENST00000554040 ZNF502Q8TBZ5 544 aa4.89□□□□□ -1.63
ATXN3-224ENST00000554040 CXorf58Q96LI9 332 aa4.89□□□□□ -1.63
ATXN3-224ENST00000554040 CIB1Q99828 191 aa4.89□□□□□ -1.63
ATXN3-224ENST00000554040 GABARAPL3Q9BY60 117 aa4.89□□□□□ -1.63
ATXN3-224ENST00000554040 GABARAPL1Q9H0R8 117 aa4.89□□□□□ -1.63
ATXN3-224ENST00000554040 RDH8Q9NYR8 311 aa4.89□□□□□ -1.63
ATXN3-224ENST00000554040 CKLFQ9UBR5 152 aa4.89□□□□□ -1.63
ATXN3-224ENST00000554040 GHRLQ9UBU3 117 aa4.89□□□□□ -1.63
ATXN3-224ENST00000554040 MGAT4AQ9UM21 535 aa4.89□□□□□ -1.63
ATXN3-224ENST00000554040 CELA1Q9UNI1 258 aa4.89□□□□□ -1.63
ATXN3-224ENST00000554040 ETV7Q9Y603 341 aa4.89□□□□□ -1.63
ATXN3-224ENST00000554040 IGLV11-55A0A075B6I3 123 aa4.88□□□□□ -1.63
ATXN3-224ENST00000554040 TRAV8-7A0A075B6U6 113 aa4.88□□□□□ -1.63
ATXN3-224ENST00000554040 IGKV1-6A0A0C4DH72 117 aa4.88□□□□□ -1.63
ATXN3-224ENST00000554040 TRBV5-5A0A0J9YX44 114 aa4.88□□□□□ -1.63
ATXN3-224ENST00000554040 TCRBV3S1A0A5B6 114 aa4.88□□□□□ -1.63
ATXN3-224ENST00000554040 K7EMT4 169 aa4.88□□□□□ -1.63
ATXN3-224ENST00000554040 CD1AP06126 327 aa4.88□□□□□ -1.63
ATXN3-224ENST00000554040 SAA1P0DJI8 122 aaPredicted RBP4.88□□□□□ -1.63
ATXN3-224ENST00000554040 DEFA4P12838 97 aa4.88□□□□□ -1.63
ATXN3-224ENST00000554040 NPY1RP25929 384 aa4.88□□□□□ -1.63
ATXN3-224ENST00000554040 PTBP1P26599 531 aaKnown RBP eCLIP4.88□□□□□ -1.634e-18■■■■■ 40.6
ATXN3-224ENST00000554040 HTR2CP28335 458 aa4.88□□□□□ -1.63
ATXN3-224ENST00000554040 GPR183P32249 361 aa4.88□□□□□ -1.63
ATXN3-224ENST00000554040 TFPI2P48307 235 aa4.88□□□□□ -1.63
ATXN3-224ENST00000554040 CCDC58Q4VC31 144 aa4.88□□□□□ -1.63
ATXN3-224ENST00000554040 TMEM41BQ5BJD5 291 aa4.88□□□□□ -1.63
ATXN3-224ENST00000554040 ZNF767PQ75MW2 155 aa4.88□□□□□ -1.63
ATXN3-224ENST00000554040 SSX9Q7RTT3 188 aa4.88□□□□□ -1.63
ATXN3-224ENST00000554040 C5orf30Q96GV9 206 aa4.88□□□□□ -1.63
ATXN3-224ENST00000554040 FAM210BQ96KR6 192 aa4.88□□□□□ -1.63
ATXN3-224ENST00000554040 RNF2Q99496 336 aa4.88□□□□□ -1.63
ATXN3-224ENST00000554040 FAM107BQ9H098 131 aa4.88□□□□□ -1.63
ATXN3-224ENST00000554040 Q9N2K0 584 aa4.88□□□□□ -1.63
ATXN3-224ENST00000554040 A0A1B0GW64 132 aa4.87□□□□□ -1.63
ATXN3-224ENST00000554040 NDUFA4O00483 81 aa4.87□□□□□ -1.63
ATXN3-224ENST00000554040 TGOLN2O43493 480 aa4.87□□□□□ -1.63
ATXN3-224ENST00000554040 DCTN3O75935 186 aa4.87□□□□□ -1.63
ATXN3-224ENST00000554040 ZNF735P0CB33 412 aa4.87□□□□□ -1.63
ATXN3-224ENST00000554040 AREGP15514 252 aa4.87□□□□□ -1.63
ATXN3-224ENST00000554040 DUTP33316 252 aaKnown RBP4.87□□□□□ -1.63
ATXN3-224ENST00000554040 RPL27AP46776 148 aaKnown RBP4.87□□□□□ -1.63
ATXN3-224ENST00000554040 ATP6AP1Q15904 470 aa4.87□□□□□ -1.63
ATXN3-224ENST00000554040 Q499Y3 187 aa4.87□□□□□ -1.63
ATXN3-224ENST00000554040 XAF1Q6GPH4 301 aa4.87□□□□□ -1.63
ATXN3-224ENST00000554040 C6orf223Q8N319 242 aa4.87□□□□□ -1.63
ATXN3-224ENST00000554040 ADTRPQ96IZ2 230 aa4.87□□□□□ -1.63
ATXN3-224ENST00000554040 C18orf15Q96N68 181 aa4.87□□□□□ -1.63
ATXN3-224ENST00000554040 UQCC2Q9BRT2 126 aa4.87□□□□□ -1.63
ATXN3-224ENST00000554040 HDHD3Q9BSH5 251 aaPredicted RBP4.87□□□□□ -1.63
ATXN3-224ENST00000554040 OR2D2Q9H210 308 aa4.87□□□□□ -1.63
ATXN3-224ENST00000554040 OR51E2Q9H255 320 aa4.87□□□□□ -1.63
ATXN3-224ENST00000554040 RNF167Q9H6Y7 350 aa4.87□□□□□ -1.63
ATXN3-224ENST00000554040 PLEKHJ1Q9NW61 149 aa4.87□□□□□ -1.63
ATXN3-224ENST00000554040 SMPXQ9UHP9 88 aa4.87□□□□□ -1.63
ATXN3-224ENST00000554040 AK3Q9UIJ7 227 aa4.87□□□□□ -1.63
ATXN3-224ENST00000554040 IGKV3-7A0A075B6H7 116 aa4.86□□□□□ -1.63
ATXN3-224ENST00000554040 TRBV5-7A0A0A0MS05 114 aa4.86□□□□□ -1.63
ATXN3-224ENST00000554040 A0A1W2PPK0 400 aa4.86□□□□□ -1.63
ATXN3-224ENST00000554040 C15orf62A8K5M9 175 aa4.86□□□□□ -1.63
ATXN3-224ENST00000554040 TRDCB7Z8K6 153 aa4.86□□□□□ -1.63
ATXN3-224ENST00000554040 CHEK1O14757 476 aa4.86□□□□□ -1.63
ATXN3-224ENST00000554040 OGG1O15527 345 aa4.86□□□□□ -1.63
ATXN3-224ENST00000554040 ZNF207O43670 478 aaKnown RBP4.86□□□□□ -1.63
ATXN3-224ENST00000554040 CD3GP09693 182 aa4.86□□□□□ -1.63
ATXN3-224ENST00000554040 SRMP19623 302 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms